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The map label for this gene is pqqL [C]

Identifier: 104779410

GI number: 104779410

Start: 95809

End: 97212

Strand: Reverse

Name: pqqL [C]

Synonym: PSEEN0100

Alternate gene names: 104779410

Gene position: 97212-95809 (Counterclockwise)

Preceding gene: 104779411

Following gene: 104779409

Centisome position: 1.65

GC content: 64.89

Gene sequence:

>1404_bases
ATGCGTTGCCTGATGTTCGTTTGCCTGCTGATCTGCAGCCTGCCCAGCCTTGCCCTCGATCGCTCGCGGGTCGAAGGCTA
CCTGTTGCCCAACGGCCTGCAGGTGATCCTCAAGTCCGGCTACGAGCGCGACCATGTCTCGATCCGCCTGGTGGTGGGCG
TCGGCCTTGACGATTTCGAGTGCGACCAGCGGGAGCTGCCGCACTTGCTCGAACACTTGCTGTTCAGCGGCATCGACGAG
ACCGGGGAGGGCGGCCTGGAAGAGCGCATCCAGGAACTGGGCGGGGAGTGGAACGCCTTCACCAGCAGCGCCGACACCAC
GTTCGTCATCGAAGCCCCCGCACGCAACCAACGCAAGGTGCTCGACCTGTTGCTCTCATTGCTGCGTGACACGCGCATCG
ACGCCAAGGCCCTGGCCACGGCGAAGAAGATCATCGAACGCGAGGACGGTGGCCACTATGGCCACCTGCAACGCTGGCTG
GATCGCCAGGAGGTTGGCCACCCGGCCAGCGAACAGCTGGCGACGGAGCTGGGCCTCAAGTGCAAGGAGCGCTCCGATGT
CGACGACATGACCCTCGAACAGGTCCAGCACCTGCGCGAACACTGGTACGTCGCCAACAACATGACCCTGATCGTCGTCG
GCGGCCTCGACCGCCTGCTGCCGGCCTACCTGGAGCGAACCTTCGGCGAGCTGCCGGCTACCGAACCAGAAGAACGTCGC
ACGCTCGAGAGCATCAGCCAGCAGGCCGAACAGCGCCGCGACCTGACCCGCGGCTGGCTGGGCGACAGCGTCAAACTGCA
CTGGCTGTTCATCGAGCCCACCTTGGACAACGGCCACGACCAGACGCTGGAGCTGCTTTCGCGCTACCTGGACTGGGCCC
TGTACGACCAGCTGCGCCTGCGCCACGGGCTGTCCTACGGCCCATCGGCGCAACGCGAGAGCTTCGGTGACAGCGGCATG
CTCAGCCTCAATGCCGACCTCGAGCGCCAGGACATCGACGCCGCGGTGAAGGTGCTCACGCAGTTGTTCGACCACCTGCG
CAAGCATGGCCTGGACCCGGACACCTTCGCCCGGATCAAGGAGGCGGCGATCGCCCGTGAAAGCTGGAGCACCCAGGGCA
ACACGGCGCTGGCCGATTATTACTGGGGGGCGCTCAACGATTACGAGAACGGACGCTTCAGCGACCCGATGCGCAAGCTG
CGCCAGGTCACCCTGAAAGAGGCCGATGCAGCGTTGCGCGAGCTGTTGAAGGAGCCGGGGTACCTGCGGATCGAGAAACC
ACTGCTGGGGTATGACGAGCTGTATGGGCTGGTGGCATTGATACTGGGGCTGGTACTCGCCATCGGGTTGATCCGCCGGC
GCCGCGTAATGGCGAATCGCCCCAGCGGTGCTACTCGGAAGTAG

Upstream 100 bases:

>100_bases
GTACTGGGCGGCACCGATACCGGCGGGCTGATGCTCGACAGCGTGCCGGACGAAGCCCGCCAACCCTGAATTCACGCACC
CCGGAGACCGAAGCTCGCCC

Downstream 100 bases:

>100_bases
TGATTCGGCGGTATCCTGTGTCGACCTCTTCGCGGATAAATCCGCTCCTACAGGGTCCTTCACCACGAATCCTGTAGGAG
CGGATTTATCCGCGAAGAGG

Product: metalloprotease M16 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRCLMFVCLLICSLPSLALDRSRVEGYLLPNGLQVILKSGYERDHVSIRLVVGVGLDDFECDQRELPHLLEHLLFSGIDE
TGEGGLEERIQELGGEWNAFTSSADTTFVIEAPARNQRKVLDLLLSLLRDTRIDAKALATAKKIIEREDGGHYGHLQRWL
DRQEVGHPASEQLATELGLKCKERSDVDDMTLEQVQHLREHWYVANNMTLIVVGGLDRLLPAYLERTFGELPATEPEERR
TLESISQQAEQRRDLTRGWLGDSVKLHWLFIEPTLDNGHDQTLELLSRYLDWALYDQLRLRHGLSYGPSAQRESFGDSGM
LSLNADLERQDIDAAVKVLTQLFDHLRKHGLDPDTFARIKEAAIARESWSTQGNTALADYYWGALNDYENGRFSDPMRKL
RQVTLKEADAALRELLKEPGYLRIEKPLLGYDELYGLVALILGLVLAIGLIRRRRVMANRPSGATRK

Sequences:

>Translated_467_residues
MRCLMFVCLLICSLPSLALDRSRVEGYLLPNGLQVILKSGYERDHVSIRLVVGVGLDDFECDQRELPHLLEHLLFSGIDE
TGEGGLEERIQELGGEWNAFTSSADTTFVIEAPARNQRKVLDLLLSLLRDTRIDAKALATAKKIIEREDGGHYGHLQRWL
DRQEVGHPASEQLATELGLKCKERSDVDDMTLEQVQHLREHWYVANNMTLIVVGGLDRLLPAYLERTFGELPATEPEERR
TLESISQQAEQRRDLTRGWLGDSVKLHWLFIEPTLDNGHDQTLELLSRYLDWALYDQLRLRHGLSYGPSAQRESFGDSGM
LSLNADLERQDIDAAVKVLTQLFDHLRKHGLDPDTFARIKEAAIARESWSTQGNTALADYYWGALNDYENGRFSDPMRKL
RQVTLKEADAALRELLKEPGYLRIEKPLLGYDELYGLVALILGLVLAIGLIRRRRVMANRPSGATRK
>Mature_467_residues
MRCLMFVCLLICSLPSLALDRSRVEGYLLPNGLQVILKSGYERDHVSIRLVVGVGLDDFECDQRELPHLLEHLLFSGIDE
TGEGGLEERIQELGGEWNAFTSSADTTFVIEAPARNQRKVLDLLLSLLRDTRIDAKALATAKKIIEREDGGHYGHLQRWL
DRQEVGHPASEQLATELGLKCKERSDVDDMTLEQVQHLREHWYVANNMTLIVVGGLDRLLPAYLERTFGELPATEPEERR
TLESISQQAEQRRDLTRGWLGDSVKLHWLFIEPTLDNGHDQTLELLSRYLDWALYDQLRLRHGLSYGPSAQRESFGDSGM
LSLNADLERQDIDAAVKVLTQLFDHLRKHGLDPDTFARIKEAAIARESWSTQGNTALADYYWGALNDYENGRFSDPMRKL
RQVTLKEADAALRELLKEPGYLRIEKPLLGYDELYGLVALILGLVLAIGLIRRRRVMANRPSGATRK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 53062; Mature: 53062

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCLMFVCLLICSLPSLALDRSRVEGYLLPNGLQVILKSGYERDHVSIRLVVGVGLDDFE
CHHHHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCC
CDQRELPHLLEHLLFSGIDETGEGGLEERIQELGGEWNAFTSSADTTFVIEAPARNQRKV
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHH
LDLLLSLLRDTRIDAKALATAKKIIEREDGGHYGHLQRWLDRQEVGHPASEQLATELGLK
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
CKERSDVDDMTLEQVQHLREHWYVANNMTLIVVGGLDRLLPAYLERTFGELPATEPEERR
CCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHH
TLESISQQAEQRRDLTRGWLGDSVKLHWLFIEPTLDNGHDQTLELLSRYLDWALYDQLRL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RHGLSYGPSAQRESFGDSGMLSLNADLERQDIDAAVKVLTQLFDHLRKHGLDPDTFARIK
HHCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EAAIARESWSTQGNTALADYYWGALNDYENGRFSDPMRKLRQVTLKEADAALRELLKEPG
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
YLRIEKPLLGYDELYGLVALILGLVLAIGLIRRRRVMANRPSGATRK
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRCLMFVCLLICSLPSLALDRSRVEGYLLPNGLQVILKSGYERDHVSIRLVVGVGLDDFE
CHHHHHHHHHHHCCCHHHHHHHHCCCEECCCHHHHHHHCCCCCCCEEEEEEEECCCCCCC
CDQRELPHLLEHLLFSGIDETGEGGLEERIQELGGEWNAFTSSADTTFVIEAPARNQRKV
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHH
LDLLLSLLRDTRIDAKALATAKKIIEREDGGHYGHLQRWLDRQEVGHPASEQLATELGLK
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
CKERSDVDDMTLEQVQHLREHWYVANNMTLIVVGGLDRLLPAYLERTFGELPATEPEERR
CCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHH
TLESISQQAEQRRDLTRGWLGDSVKLHWLFIEPTLDNGHDQTLELLSRYLDWALYDQLRL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RHGLSYGPSAQRESFGDSGMLSLNADLERQDIDAAVKVLTQLFDHLRKHGLDPDTFARIK
HHCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EAAIARESWSTQGNTALADYYWGALNDYENGRFSDPMRKLRQVTLKEADAALRELLKEPG
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
YLRIEKPLLGYDELYGLVALILGLVLAIGLIRRRRVMANRPSGATRK
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]