| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is 104779409
Identifier: 104779409
GI number: 104779409
Start: 94651
End: 95673
Strand: Reverse
Name: 104779409
Synonym: PSEEN0099
Alternate gene names: NA
Gene position: 95673-94651 (Counterclockwise)
Preceding gene: 104779410
Following gene: 104779408
Centisome position: 1.62
GC content: 64.61
Gene sequence:
>1023_bases ATGCCTCCACTACCCAACTTCGTCCTGCGCGTGATCGAACTGCTCAAGCGCTACCCCGGTGTCATCGCGCTCTACGGTTT CATCTCCGGTATCTGCAGCTTCATCCTGGTCGACCGCCAGGCCGGCCTGGCCAGCTGGATCGCCATCGTGATGCTGGTCA GCTGGGTCTGGCTGATGCTGGAGAACACCCTCACCGAGCTGTTCGCCCGCACCTTCAAGCGCGAGATCCCGCAGCCGCTG CTGCGCTTCGCGACGCAGATGATCCACCAGGAAAGCCTGTTCTTCGTCCTGCCGTTCTTCTTCATCACCACCACCTGGAA CAGCGGCCAGCTGGTGTTCACCGGCCTGCTCGGCGCCGCCGGGCTGATCTCGATCATCGACCCGCTGTACCACAAGTGGC TGGCGCCACGGCGCTGGCTGTTCCTGGCGTTGCACACGCTGACGCTGTTCGCCGCGATGCTCACGGCGTTGCCGATCATC CTCAACCTGACCACCGCGCAGAGCTTCAAGCTGGCACTGGTCGCGGCCATGGTGCTGTCGTTCCCGAGCCTGGCCAGCAG CTTCCCGATCAACAACTGGCGCCGTGGCGTGGGACTGGTGCTGGTCACCCTGGCAGTGGGAGGCGGTGGCTGGCTGCTGC GCTCCTGGGTACCGCCGGCCACCCTGTGGATGACCGACGTGGCGATCAGCACCGAGGTGCTCAACCGCCAACCAGGCGCG TCGCTGGACGAAGTCGCCGCCAGCCGCATTCGCAGCGGCGGGCTGTACGCCTATACCGCGATCAATGCGCCGCGCGGGCT TAATGAACGCATCTACCATGTGTGGCAGCTCAACGGTAAAGAGGTCGACCGCATCGCCCTGGATATCCATGGCGGGCGCA AGGAGGGCTACCGCGCCTGGACCCACAAGCAGAACTTCCCGCCCAACCCGGTGGGCAAGTGGCAGGTGAGGGTGCTGACC GAGGATGGGCAGGTGATCGGGGTGTTGCGGTTCAAGGTGGTCGACGACACAGCACCCAAATAG
Upstream 100 bases:
>100_bases ATAAATCCGCTCCTACAGGGTCCTTCACCACGAATCCTGTAGGAGCGGATTTATCCGCGAAGAGGCCGGCGCTGTTACCC ATTCATCCTGTTGTAGACCC
Downstream 100 bases:
>100_bases GGCCCTGTTCGCCGGCAAGCCGGCGAACCGATCACATATTCAACAGCCCGCCCACCCTGCTGCGCTATGATCAGCCTCTA TGCCCCCAGTCAGATGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPPLPNFVLRVIELLKRYPGVIALYGFISGICSFILVDRQAGLASWIAIVMLVSWVWLMLENTLTELFARTFKREIPQPL LRFATQMIHQESLFFVLPFFFITTTWNSGQLVFTGLLGAAGLISIIDPLYHKWLAPRRWLFLALHTLTLFAAMLTALPII LNLTTAQSFKLALVAAMVLSFPSLASSFPINNWRRGVGLVLVTLAVGGGGWLLRSWVPPATLWMTDVAISTEVLNRQPGA SLDEVAASRIRSGGLYAYTAINAPRGLNERIYHVWQLNGKEVDRIALDIHGGRKEGYRAWTHKQNFPPNPVGKWQVRVLT EDGQVIGVLRFKVVDDTAPK
Sequences:
>Translated_340_residues MPPLPNFVLRVIELLKRYPGVIALYGFISGICSFILVDRQAGLASWIAIVMLVSWVWLMLENTLTELFARTFKREIPQPL LRFATQMIHQESLFFVLPFFFITTTWNSGQLVFTGLLGAAGLISIIDPLYHKWLAPRRWLFLALHTLTLFAAMLTALPII LNLTTAQSFKLALVAAMVLSFPSLASSFPINNWRRGVGLVLVTLAVGGGGWLLRSWVPPATLWMTDVAISTEVLNRQPGA SLDEVAASRIRSGGLYAYTAINAPRGLNERIYHVWQLNGKEVDRIALDIHGGRKEGYRAWTHKQNFPPNPVGKWQVRVLT EDGQVIGVLRFKVVDDTAPK >Mature_339_residues PPLPNFVLRVIELLKRYPGVIALYGFISGICSFILVDRQAGLASWIAIVMLVSWVWLMLENTLTELFARTFKREIPQPLL RFATQMIHQESLFFVLPFFFITTTWNSGQLVFTGLLGAAGLISIIDPLYHKWLAPRRWLFLALHTLTLFAAMLTALPIIL NLTTAQSFKLALVAAMVLSFPSLASSFPINNWRRGVGLVLVTLAVGGGGWLLRSWVPPATLWMTDVAISTEVLNRQPGAS LDEVAASRIRSGGLYAYTAINAPRGLNERIYHVWQLNGKEVDRIALDIHGGRKEGYRAWTHKQNFPPNPVGKWQVRVLTE DGQVIGVLRFKVVDDTAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38046; Mature: 37915
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLPNFVLRVIELLKRYPGVIALYGFISGICSFILVDRQAGLASWIAIVMLVSWVWLML CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ENTLTELFARTFKREIPQPLLRFATQMIHQESLFFVLPFFFITTTWNSGQLVFTGLLGAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH GLISIIDPLYHKWLAPRRWLFLALHTLTLFAAMLTALPIILNLTTAQSFKLALVAAMVLS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FPSLASSFPINNWRRGVGLVLVTLAVGGGGWLLRSWVPPATLWMTDVAISTEVLNRQPGA HHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC SLDEVAASRIRSGGLYAYTAINAPRGLNERIYHVWQLNGKEVDRIALDIHGGRKEGYRAW CHHHHHHHHHHCCCEEEEEEECCCCCCCHHHEEEEECCCCEEEEEEEEECCCCCCCCCHH THKQNFPPNPVGKWQVRVLTEDGQVIGVLRFKVVDDTAPK CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCC >Mature Secondary Structure PPLPNFVLRVIELLKRYPGVIALYGFISGICSFILVDRQAGLASWIAIVMLVSWVWLML CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ENTLTELFARTFKREIPQPLLRFATQMIHQESLFFVLPFFFITTTWNSGQLVFTGLLGAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHH GLISIIDPLYHKWLAPRRWLFLALHTLTLFAAMLTALPIILNLTTAQSFKLALVAAMVLS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FPSLASSFPINNWRRGVGLVLVTLAVGGGGWLLRSWVPPATLWMTDVAISTEVLNRQPGA HHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC SLDEVAASRIRSGGLYAYTAINAPRGLNERIYHVWQLNGKEVDRIALDIHGGRKEGYRAW CHHHHHHHHHHCCCEEEEEEECCCCCCCHHHEEEEECCCCEEEEEEEEECCCCCCCCCHH THKQNFPPNPVGKWQVRVLTEDGQVIGVLRFKVVDDTAPK CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA