Click here to switch to the map view.

The map label for this gene is yvdB [H]

Identifier: 104779345

GI number: 104779345

Start: 32667

End: 34232

Strand: Reverse

Name: yvdB [H]

Synonym: PSEEN0032

Alternate gene names: 104779345

Gene position: 34232-32667 (Counterclockwise)

Preceding gene: 104779346

Following gene: 104779342

Centisome position: 0.58

GC content: 66.73

Gene sequence:

>1566_bases
ATGCCCCGTCCACACCACCTGCTGCCCTTCCTCGCCTGGCTCCCCCGCCAATCGGGTCGCAGCCTGCGCCAGGACCTGCT
GGTAGGCCTGAGCGGCGCCATCCTCGCCCTGCCGCAATCGATCGCCTACGCCCTGATCGCCGGCCTGCCCGCCGAATACG
GCCTGTACGCCGCCATCGTGCCGGTGCTGGTCGCCTGCCTGTGGGGCTCGTCCTGGCACCTGATCTGCGGCCCCACCGCC
GCCATTTCCATCGTCCTCTATGCCAGCATCAGCCCACTGGCCGTGGCCGGCAGCGCCGACTACGTGACCCTGGTGCTGCT
GCTGACCTTCCTCGGCGGCGTCTTCCAGCTCATGCTGGGGCTGCTGCGCTTCGGCGCGCTGGTCAACTTCGTCTCCCATT
CGGTGGTGCTGGGCTTCACCCTCGGTGCTGCCATCGTCATCGCGCTGGGGCAACTGCCCAATCTGCTGGGCCTGGACCTG
CCAAGCCAGGCCACGGCTCTGAAGACCGTGCAGGAACTGACCGGCCATGTTGGTGAGGTGGACATGCCATCGCTGATTCT
GGGACTGAGCACCCTGGTGATTGGCGTGGTGTTGAAGCTATGGCGCCCGCGCTGGCCGAGCCTGTTGATAAGTTTGCTGC
TGGTCAGCCTGGCGGCCTGGCTGTTGCCCGGCGTGTTCGGCCATGTACCACGCGTGCCCGCTTTCGTCGGCCAGTTGCCA
CCGCTCAGCCCGCTGCCGTTACTCGATGTGGAACTTATCCTGCGCCTGCTGCCCAGTGCCGTGGCTGTCGGCATGCTCGG
GCTGGTCACCAGCCTGTCCATCGCCCGTTCCCTGTCCGCCCGTTCCGAGCAACTGATCGACGCCAACCAGGAGATCCGCG
CCCAGGGCCTGTCGAACATCGTCGGGGCATTGTTCTCCGGCTATCTGTCCTCCGGCTCCTTTACCCGCTCCGGGCTCAGC
TACGACGCAGGCGCCCGCTCGCCATTGGCCGGAGTGTTCTCGGCGCTGTGGGTGACGCTGTTCGCGGTCGCTGGTGCCGG
GCTGATCGCTCATCTGCCGATCCCGGCGATGGCGGGCAGCATCCTACTGATCTGCTGGGGGCTGGTGGACCATCGCGGCA
TCCGCGCGCTGTTCCGGGTCAGCCGTTCGGAGTTCCTGGTAATGGCGCTGACCGCCGCCGCGACGCTGCTGCTGGAGCTG
CAAACGGCGATCTACGCCGGGGTGCTGGCATCGCTGTTCTTCTACCTCAAGCGCACTTCGCGGCCACGGGTGCAGCAGAG
CCGGGAAGGGGAGGCGGATGTGTTGCGGGTGGGCGGGTCGATCTTCTTCGGCGCGGCGCATTACCTGCAGGTGCGCTTGC
AGCGCTGCCAGGGGCCGCATGTGGTGATCGATGCGCGGCAGGTGAACTTCATCGATTACTCGGGTGTGGATATGTTGCAC
CGCGAGGCGCGGCGGTTGCTGCGCAATGGCGGGAGCCTGACATTGCGGCGAGCGCGGCCGCAGGTGATAGAGGAACTGCA
GAAGCTGGAAGGCCTGGCGAGCTGCCCAATACGCTTCGAGGGCTGA

Upstream 100 bases:

>100_bases
AGGCCGCTCCTACAGGCGAGCGCGAATCCCTGTAGGAGCGGCCTTGTGCCGCGAAACGAGGGCAAAGCCCTCGCCTGCGA
TCTCAAATCAGGACCACCCC

Downstream 100 bases:

>100_bases
CGGTCAACTGGCATTTCTGTCAGTTGCGTGCAACGTGCAGGCAGTGAAAGAGTGAATAACGCTCATTCACTGCGGAGCAC
GCCATGAGTAGTTGCGTTTA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIVPVLVACLWGSSWHLICGPTA
AISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLGLLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDL
PSQATALKTVQELTGHVGEVDMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLP
PLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNIVGALFSGYLSSGSFTRSGLS
YDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGSILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLEL
QTAIYAGVLASLFFYLKRTSRPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLH
REARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG

Sequences:

>Translated_521_residues
MPRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIVPVLVACLWGSSWHLICGPTA
AISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLGLLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDL
PSQATALKTVQELTGHVGEVDMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLP
PLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNIVGALFSGYLSSGSFTRSGLS
YDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGSILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLEL
QTAIYAGVLASLFFYLKRTSRPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLH
REARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG
>Mature_520_residues
PRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIVPVLVACLWGSSWHLICGPTAA
ISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLGLLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDLP
SQATALKTVQELTGHVGEVDMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLPP
LSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNIVGALFSGYLSSGSFTRSGLSY
DAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGSILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLELQ
TAIYAGVLASLFFYLKRTSRPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLHR
EARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI94721257, Length=500, Percent_Identity=29, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI94721259, Length=500, Percent_Identity=29, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI94721255, Length=500, Percent_Identity=29, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI94721253, Length=500, Percent_Identity=29, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI45827800, Length=522, Percent_Identity=25.2873563218391, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI39752683, Length=522, Percent_Identity=25.2873563218391, Blast_Score=143, Evalue=5e-34,
Organism=Homo sapiens, GI45827802, Length=463, Percent_Identity=26.133909287257, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI4557535, Length=542, Percent_Identity=25.6457564575646, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI269784651, Length=386, Percent_Identity=27.979274611399, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI4505697, Length=562, Percent_Identity=23.4875444839858, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI100913030, Length=460, Percent_Identity=25, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI262206105, Length=154, Percent_Identity=42.8571428571429, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI262206075, Length=154, Percent_Identity=42.8571428571429, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI262206069, Length=154, Percent_Identity=42.8571428571429, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI262206063, Length=154, Percent_Identity=42.8571428571429, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI47131207, Length=550, Percent_Identity=27.6363636363636, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI20336272, Length=550, Percent_Identity=27.6363636363636, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI20336282, Length=514, Percent_Identity=22.9571984435798, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI16306483, Length=514, Percent_Identity=22.7626459143969, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI16418413, Length=368, Percent_Identity=25.5434782608696, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI217272867, Length=368, Percent_Identity=25.5434782608696, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI45827804, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI65506789, Length=471, Percent_Identity=27.6008492569002, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI16418457, Length=451, Percent_Identity=19.5121951219512, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI301601599, Length=451, Percent_Identity=19.5121951219512, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI87081859, Length=517, Percent_Identity=30.3675048355899, Blast_Score=160, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17566848, Length=536, Percent_Identity=23.6940298507463, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI86565215, Length=577, Percent_Identity=23.2235701906412, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17551690, Length=444, Percent_Identity=21.1711711711712, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI193203292, Length=458, Percent_Identity=24.4541484716157, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17562578, Length=481, Percent_Identity=25.5717255717256, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI86564196, Length=483, Percent_Identity=23.1884057971014, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI86565213, Length=174, Percent_Identity=29.8850574712644, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI86564876, Length=358, Percent_Identity=21.2290502793296, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982567, Length=457, Percent_Identity=24.0700218818381, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323121, Length=442, Percent_Identity=24.8868778280543, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6319771, Length=366, Percent_Identity=25.9562841530055, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6325260, Length=445, Percent_Identity=24.4943820224719, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI19922482, Length=505, Percent_Identity=28.3168316831683, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI85815873, Length=477, Percent_Identity=27.4633123689727, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI21358633, Length=535, Percent_Identity=26.7289719626168, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24649801, Length=549, Percent_Identity=23.6794171220401, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24647160, Length=532, Percent_Identity=24.6240601503759, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI21355087, Length=532, Percent_Identity=24.6240601503759, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24663084, Length=534, Percent_Identity=25.0936329588015, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21357695, Length=534, Percent_Identity=25.0936329588015, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24651449, Length=466, Percent_Identity=26.1802575107296, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI21358229, Length=561, Percent_Identity=23.3511586452763, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24666186, Length=422, Percent_Identity=25.3554502369668, Blast_Score=105, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55678; Mature: 55547

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIV
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
PVLVACLWGSSWHLICGPTAAISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLG
HHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
LLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDLPSQATALKTVQELTGHVGEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
DMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLP
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VGALFSGYLSSGSFTRSGLSYDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGS
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHH
ILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLELQTAIYAGVLASLFFYLKRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLH
CCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEECEECCCCHHHHH
REARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG
HHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHCCCCEECC
>Mature Secondary Structure 
PRPHHLLPFLAWLPRQSGRSLRQDLLVGLSGAILALPQSIAYALIAGLPAEYGLYAAIV
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
PVLVACLWGSSWHLICGPTAAISIVLYASISPLAVAGSADYVTLVLLLTFLGGVFQLMLG
HHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
LLRFGALVNFVSHSVVLGFTLGAAIVIALGQLPNLLGLDLPSQATALKTVQELTGHVGEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCC
DMPSLILGLSTLVIGVVLKLWRPRWPSLLISLLLVSLAAWLLPGVFGHVPRVPAFVGQLP
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
PLSPLPLLDVELILRLLPSAVAVGMLGLVTSLSIARSLSARSEQLIDANQEIRAQGLSNI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VGALFSGYLSSGSFTRSGLSYDAGARSPLAGVFSALWVTLFAVAGAGLIAHLPIPAMAGS
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHH
ILLICWGLVDHRGIRALFRVSRSEFLVMALTAAATLLLELQTAIYAGVLASLFFYLKRTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPRVQQSREGEADVLRVGGSIFFGAAHYLQVRLQRCQGPHVVIDARQVNFIDYSGVDMLH
CCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEECEECCCCHHHHH
REARRLLRNGGSLTLRRARPQVIEELQKLEGLASCPIRFEG
HHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]