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The map label for this gene is 104779346

Identifier: 104779346

GI number: 104779346

Start: 34383

End: 35306

Strand: Reverse

Name: 104779346

Synonym: PSEEN0033

Alternate gene names: NA

Gene position: 35306-34383 (Counterclockwise)

Preceding gene: 104779347

Following gene: 104779345

Centisome position: 0.6

GC content: 60.93

Gene sequence:

>924_bases
ATGCAGAAGTTCTCCACCGCCGTGCTCGCCCTGGCCCTGAGCCTGGGCACGGCCCACGCCGCCGACGGCAACGTGCAATG
CAGCACCGTGAAACTGGCCGACCCTGGCTGGAGCGATATCGCCAGTACCAACGCCGTCGCTCGCCTGCTCCTGGAAAACC
TGGGCTACCAGGTGAAGATCGACAGCCTGGCCGTGCCGATAATCTACGGCGGCCTGAAGGACGGCCGGGTGGACGCCTTT
CTCGGCAACTGGATGCCGGCGCAGCAGGGCTTTCATGACAAATTCATCGCCAATGGCGACGTGCAGCAGCTGGCGCGCAA
CCTGGAGGGCACCGAGTTCACCCTGGCGGTGCCCGATTATGTGTGGGAAGCCGGCGTGAAGGACTTCGCCGACCTGCACA
AGTACGCTGACAAGTTCGACAAGAAGCTCTACGGCATCGGCTCCGGCGCGCCGGCCAACCTGTCGCTGAAGGAGATCATC
GACAAGAACGACTTCGCGCTTGGGCAGTGGAAGCTGGTCGAATCCAGCGAGCAGGCGATGCTGGCCCAGGTGGACCGGGC
GGTGAAAAAGCAGCAGTTCATCACCTTCCTGGGCTGGACCCCGCATCCGATGAACGTGAAGTTGAAGATGCATTACCTCA
CGGGTGGCGAACAATGGTTTGGCAGCAAAGGCGATGTGTACACGCTGACCCGCAAGGGCTATCCACAGGCTTGCCCGAAT
GCAGCGAAGTTGCTGAGCAACCTGACGTTCACGCTGGAGATGGAGAACAGCATCATGGCCGAGGTTGTGGATAAGAAGGT
GAGCTTTGATGAAGCGGCCAGGAGGTGGGTGAAGGCTCATCCGGAATTGCTGGACGGTTGGCTGGCCGGAGTGACCTCCA
AGGACGGTGGAGATGCATCAGAAGTGCTCAAGGCCAAGCTCTGA

Upstream 100 bases:

>100_bases
CCAGCCAACAGTACATGCGCAACCACATCGATCTCGACGACCTCGAGCGCAAGGCACGTTATCCACAGCCCGCACCCCTG
GATTGAGAAGAGAGGCCGCC

Downstream 100 bases:

>100_bases
GTTTCGTCTGTTAGGCTGCTGGGGCCGCTTTGCGGCCCTTTCGCGGCACAAGGCCGCTCCTACAGGCGAGCGCGAATCCC
TGTAGGAGCGGCCTTGTGCC

Product: glycine betaine-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKIDSLAVPIIYGGLKDGRVDAF
LGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDYVWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEII
DKNDFALGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPN
AAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDASEVLKAKL

Sequences:

>Translated_307_residues
MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKIDSLAVPIIYGGLKDGRVDAF
LGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDYVWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEII
DKNDFALGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPN
AAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDASEVLKAKL
>Mature_307_residues
MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKIDSLAVPIIYGGLKDGRVDAF
LGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDYVWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEII
DKNDFALGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPN
AAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDASEVLKAKL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33627; Mature: 33627

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKI
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEE
DSLAVPIIYGGLKDGRVDAFLGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDY
CCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCEEEEECCHH
VWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEIIDKNDFALGQWKLVESSEQAM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHHHH
LAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPN
HHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCHHHCCCCCCEEEEECCCCCCCCCH
AAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDAS
HHHHHHCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHH
EVLKAKL
HHHHHCC
>Mature Secondary Structure
MQKFSTAVLALALSLGTAHAADGNVQCSTVKLADPGWSDIASTNAVARLLLENLGYQVKI
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEE
DSLAVPIIYGGLKDGRVDAFLGNWMPAQQGFHDKFIANGDVQQLARNLEGTEFTLAVPDY
CCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCEEEEECCHH
VWEAGVKDFADLHKYADKFDKKLYGIGSGAPANLSLKEIIDKNDFALGQWKLVESSEQAM
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHHHH
LAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEQWFGSKGDVYTLTRKGYPQACPN
HHHHHHHHHHHHHEEEECCCCCCCEEEEEEEEECCCHHHCCCCCCEEEEECCCCCCCCCH
AAKLLSNLTFTLEMENSIMAEVVDKKVSFDEAARRWVKAHPELLDGWLAGVTSKDGGDAS
HHHHHHCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHH
EVLKAKL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]