| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is hdtS [H]
Identifier: 104779328
GI number: 104779328
Start: 16126
End: 16896
Strand: Reverse
Name: hdtS [H]
Synonym: PSEEN0014
Alternate gene names: 104779328
Gene position: 16896-16126 (Counterclockwise)
Preceding gene: 162139702
Following gene: 104779325
Centisome position: 0.29
GC content: 63.94
Gene sequence:
>771_bases ATGTCGATCCTGCAGGCGATCAGAATCTTTCTTTTTTACCTGCTGTTGGGCACCAGTTCGCTGCTGTGGTGCTCGCTGAG CTTCTTCGTCGCGCCTTTCCTGCCGTTCCCCAAGCGCTACAAGTTCATCAACGTGTACTGGTGCCGCTGCGCGCTGTTCC TGGTGAAGACGATCCTCGGGATCGACTACAAGATCACCGGCGCCGAACATGTGCCTGATGTGCCGTGCGTGATCCTGTCG AACCACCAGAGCACCTGGGAGACGTTCTTCCTTTCGGCGTACTTCTCGCCGCTGAGCCAGGTACTCAAGCGCGAGCTGCT GTACGTGCCGTTCTTCGGCTGGGCCATGGCCATGCTGCGACCGATCGCCATCGACCGGAAGAACCCGAAAGAGGCCTTGC GCCAGGTTGCCAGCCAGGGTGACGAGTTGCTCAAACAGGGCACCTGGGTGCTGATCTTCCCCGAAGGCACCCGCGTGCCC CACGGCCAGATGGGCAAGTTCTCCCGCGGTGGCACCGCGCTCGCAGTGAATGCCGGCCTGCCGGTGCTGCCGATCGCCCA CAACGCCGGCAAGTTCTGGCCCCGTGAAGGCTGGGGCAAGCGCCCGGGCACCATCGAGGTGGTAATTGGCGCGCCGATGT ACCCGGAAGGGACGGGGCCACGGGCCATTGCCGAGCTCAACGACCGCGCCCAGGCGTGGAACGAGGCAGCCCAGCGGGCC ATGGGTTCGCTGCCGCCGGTGGCGGAAAATCCGGAACAGCAGCACGCCTGA
Upstream 100 bases:
>100_bases ACGATCTGGCAGCCATCGCCAGAGAACTTATTTAAATGAGTGCGCCAGGAACGGCGCACTTTTCATTAGGCGGGCACGCC CCGCAACGGTACATGCCACT
Downstream 100 bases:
>100_bases CGTTCTGTGGATAAGTTGTTAGCAATTTTGGGATTACGTGTGTCATAACATAGCTAACCTGTTGAATTAGCTATTTATTT CTCTGTATGACGTTTTTCTG
Product: N-acylhomoserine lactone synthase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILGIDYKITGAEHVPDVPCVILS NHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLRPIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVP HGQMGKFSRGGTALAVNAGLPVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRA MGSLPPVAENPEQQHA
Sequences:
>Translated_256_residues MSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILGIDYKITGAEHVPDVPCVILS NHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLRPIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVP HGQMGKFSRGGTALAVNAGLPVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRA MGSLPPVAENPEQQHA >Mature_255_residues SILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILGIDYKITGAEHVPDVPCVILSN HQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLRPIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVPH GQMGKFSRGGTALAVNAGLPVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRAM GSLPPVAENPEQQHA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=191, Percent_Identity=32.4607329842932, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI15100175, Length=191, Percent_Identity=32.4607329842932, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI6041665, Length=205, Percent_Identity=25.8536585365854, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564032, Length=200, Percent_Identity=26.5, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320151, Length=255, Percent_Identity=28.6274509803922, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24641614, Length=194, Percent_Identity=27.8350515463918, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641612, Length=194, Percent_Identity=27.8350515463918, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI281364648, Length=229, Percent_Identity=26.2008733624454, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24582856, Length=229, Percent_Identity=26.2008733624454, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24582854, Length=229, Percent_Identity=26.2008733624454, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28616; Mature: 28485
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC IDYKITGAEHVPDVPCVILSNHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLR CCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVPHGQMGKFSRGGTALAVNAGL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC PVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRA CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGSLPPVAENPEQQHA HCCCCCCCCCCHHCCC >Mature Secondary Structure SILQAIRIFLFYLLLGTSSLLWCSLSFFVAPFLPFPKRYKFINVYWCRCALFLVKTILG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC IDYKITGAEHVPDVPCVILSNHQSTWETFFLSAYFSPLSQVLKRELLYVPFFGWAMAMLR CCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH PIAIDRKNPKEALRQVASQGDELLKQGTWVLIFPEGTRVPHGQMGKFSRGGTALAVNAGL HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC PVLPIAHNAGKFWPREGWGKRPGTIEVVIGAPMYPEGTGPRAIAELNDRAQAWNEAAQRA CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGSLPPVAENPEQQHA HCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]