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The map label for this gene is yciF [H]

Identifier: 94986396

GI number: 94986396

Start: 2417475

End: 2417960

Strand: Reverse

Name: yciF [H]

Synonym: Dgeo_2297

Alternate gene names: 94986396

Gene position: 2417960-2417475 (Counterclockwise)

Preceding gene: 94986397

Following gene: 94986395

Centisome position: 98.0

GC content: 60.49

Gene sequence:

>486_bases
ATGCGCTATCACACTCTCAATGACCTGTACGTCTCCCTTCTGCGTGACCTTTACTCCGCGGAGCAGCAACTGCTCATCGC
GCTTCCCGTGATGGCGCAGTCGGTGGTGACGCCAAAGCTGAAAGAAGGCTTCGAACTCCACCTGACGCAGACGCAAGAAC
ATGTCAAGCGCCTGGAAAAGATCTTCTCTGGGTTGGGCGAGTCTCCGCTCGGCAAGGTCAGCGGCGCGATGCTCGGGCTG
GTGAGGGAAGGCAACGACATCATCACCGGCAACGAGCCGGGCGTCGTGCGCGACGCCGCCCTGATCATGGCTGCGCAGCG
GGTCGAGCACCTGGAAATCGCCAGCTACGGCACCGCCGCCACCTATGCGGGTCTGCTGGGTGAGGAGAAGGCGGTCAAAC
TGTTGGAAACCACCCTGAAGGAAGAGGAAGAAACCGACCAACAGCTCACGGTAGTGGCCAGCGCGATCAATCCCAAAGCG
GTCTAA

Upstream 100 bases:

>100_bases
CACAGGCAGAGCAAGAGGAAATCACGGGGAAGAGCCCGCGAGGTCATTGCTTTGTTCTGTCACCCGTCCAGACGATCTCA
GCGACGCAAGGAGAATGTCT

Downstream 100 bases:

>100_bases
GCCCCCGCCACGCCAGAACGAACCAAGAGCAGGAATGGGACTCCGGGTCACCGATACGCCGGAGTTGGAGGTTTCATATG
AAAGCTGTCATTTACAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRYHTLNDLYVSLLRDLYSAEQQLLIALPVMAQSVVTPKLKEGFELHLTQTQEHVKRLEKIFSGLGESPLGKVSGAMLGL
VREGNDIITGNEPGVVRDAALIMAAQRVEHLEIASYGTAATYAGLLGEEKAVKLLETTLKEEEETDQQLTVVASAINPKA
V

Sequences:

>Translated_161_residues
MRYHTLNDLYVSLLRDLYSAEQQLLIALPVMAQSVVTPKLKEGFELHLTQTQEHVKRLEKIFSGLGESPLGKVSGAMLGL
VREGNDIITGNEPGVVRDAALIMAAQRVEHLEIASYGTAATYAGLLGEEKAVKLLETTLKEEEETDQQLTVVASAINPKA
V
>Mature_161_residues
MRYHTLNDLYVSLLRDLYSAEQQLLIALPVMAQSVVTPKLKEGFELHLTQTQEHVKRLEKIFSGLGESPLGKVSGAMLGL
VREGNDIITGNEPGVVRDAALIMAAQRVEHLEIASYGTAATYAGLLGEEKAVKLLETTLKEEEETDQQLTVVASAINPKA
V

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=162, Percent_Identity=44.4444444444444, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 17556; Mature: 17556

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYHTLNDLYVSLLRDLYSAEQQLLIALPVMAQSVVTPKLKEGFELHLTQTQEHVKRLEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHHHH
IFSGLGESPLGKVSGAMLGLVREGNDIITGNEPGVVRDAALIMAAQRVEHLEIASYGTAA
HHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
TYAGLLGEEKAVKLLETTLKEEEETDQQLTVVASAINPKAV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRYHTLNDLYVSLLRDLYSAEQQLLIALPVMAQSVVTPKLKEGFELHLTQTQEHVKRLEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEHHHHHHHHHHHH
IFSGLGESPLGKVSGAMLGLVREGNDIITGNEPGVVRDAALIMAAQRVEHLEIASYGTAA
HHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
TYAGLLGEEKAVKLLETTLKEEEETDQQLTVVASAINPKAV
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]