| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yhcX [H]
Identifier: 94986363
GI number: 94986363
Start: 2389673
End: 2390593
Strand: Reverse
Name: yhcX [H]
Synonym: Dgeo_2264
Alternate gene names: 94986363
Gene position: 2390593-2389673 (Counterclockwise)
Preceding gene: 94986365
Following gene: 94986362
Centisome position: 96.89
GC content: 69.49
Gene sequence:
>921_bases ATGAGCGTCCTGCGTGTGGCGGCAGCGGCCTACCCGGTGGACTTCCACCCCGGCTGGGCTGCGTATGAGGCGAAGGTGAC GGCCTGGGTCGCGGATGCGGCGGGGCGGGGGGCGCGACTGCTGGTGTTTCCGGAATACGCCTCTCTCGAACTGATCAGCC TGCTGCCGCCGGAGCTGCACCACGACATCCTGGCCCTGCGGCCCGCGCTGCAGGCTTTCCTGCCCGAGTTCTTGGCGCTC CACGCCCGGTTGGCCCGGCAGCATGGTGTGGGACTCGTGGCGGGCAGCTTTCCGGTGGCGCAGGGGGGCGGCTATGTGAA TCGTGCCTACGTGTTTGGCCCGAACGGTGCTCAGCACTGGCAAGACAAGCTGCTGATGACGCGCTTCGAGGCAGAGGAGT GGCAGATTGACCCGGGCACGGGTGTACGCGTGTTTGAGTTGCCGCTGACCGGTGAGGAGGCGCTGCGCTTTGGCGTCGCC GTCTGCTACGACAGCGAGTTCCCGACCCTGGCCCGCCAGTTGGCCGAGGGCGGGGCGGAGGTGCTGGTCGTGCCCTCCTT TACCAGCGCCCGTGCGGGCTACACCCGCGTCCGGGTGGGCAGCCTGGCCCGCGCGCTGGAAAACCAGTTCTACGCCGTCC ACGCGCCCCTGATCGCGGACGCCGCCTGGACGTATGCCGTGGAGGAGGCCGTCGGAAGGGCCAGCGTGTATGCCCCCGCC GACCACGGCCTCCCGGAGACGGGGATCGTTGCGGAAGGCGAGTGGAATACTCCCGGCTGGCTGGTCACCGACCTCGATCT GGAGCTGATCCGGCGGGTGCGGGAAGATGGCCACGTCCTGAACTGGCGCGACCGCCACGCCGGGCAGACGCGTCCTGGAC CCGCCGAGGTGGTGCAGCTGGGAGTGGCCGTTTACGGCTGA
Upstream 100 bases:
>100_bases GGAACAGGGTACGTGGTGCGCGGGAGGAGGGTGGACATGAGGGTGGACATCAGCCGTCTCCCGGATCTTTTCCCGGCTGC TCGCCCGCTACACTCGCCCC
Downstream 100 bases:
>100_bases AGCCTCCGCTGTCGCTCCCTGACCGCTGCCGATGCCTTCGTCTGAGGAGCGGCCCGCCGCCTGTACGAGCGGCACGGCTT CCGGGAGTGGTTACCCTGAC
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSVLRVAAAAYPVDFHPGWAAYEAKVTAWVADAAGRGARLLVFPEYASLELISLLPPELHHDILALRPALQAFLPEFLAL HARLARQHGVGLVAGSFPVAQGGGYVNRAYVFGPNGAQHWQDKLLMTRFEAEEWQIDPGTGVRVFELPLTGEEALRFGVA VCYDSEFPTLARQLAEGGAEVLVVPSFTSARAGYTRVRVGSLARALENQFYAVHAPLIADAAWTYAVEEAVGRASVYAPA DHGLPETGIVAEGEWNTPGWLVTDLDLELIRRVREDGHVLNWRDRHAGQTRPGPAEVVQLGVAVYG
Sequences:
>Translated_306_residues MSVLRVAAAAYPVDFHPGWAAYEAKVTAWVADAAGRGARLLVFPEYASLELISLLPPELHHDILALRPALQAFLPEFLAL HARLARQHGVGLVAGSFPVAQGGGYVNRAYVFGPNGAQHWQDKLLMTRFEAEEWQIDPGTGVRVFELPLTGEEALRFGVA VCYDSEFPTLARQLAEGGAEVLVVPSFTSARAGYTRVRVGSLARALENQFYAVHAPLIADAAWTYAVEEAVGRASVYAPA DHGLPETGIVAEGEWNTPGWLVTDLDLELIRRVREDGHVLNWRDRHAGQTRPGPAEVVQLGVAVYG >Mature_305_residues SVLRVAAAAYPVDFHPGWAAYEAKVTAWVADAAGRGARLLVFPEYASLELISLLPPELHHDILALRPALQAFLPEFLALH ARLARQHGVGLVAGSFPVAQGGGYVNRAYVFGPNGAQHWQDKLLMTRFEAEEWQIDPGTGVRVFELPLTGEEALRFGVAV CYDSEFPTLARQLAEGGAEVLVVPSFTSARAGYTRVRVGSLARALENQFYAVHAPLIADAAWTYAVEEAVGRASVYAPAD HGLPETGIVAEGEWNTPGWLVTDLDLELIRRVREDGHVLNWRDRHAGQTRPGPAEVVQLGVAVYG
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: 3.5.-.- [C]
Molecular weight: Translated: 33237; Mature: 33106
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLRVAAAAYPVDFHPGWAAYEAKVTAWVADAAGRGARLLVFPEYASLELISLLPPELH CCHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCHHH HDILALRPALQAFLPEFLALHARLARQHGVGLVAGSFPVAQGGGYVNRAYVFGPNGAQHW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHH QDKLLMTRFEAEEWQIDPGTGVRVFELPLTGEEALRFGVAVCYDSEFPTLARQLAEGGAE HHHHHHHEECCCCEEECCCCCEEEEEECCCHHHHHHHCEEEEECCCCHHHHHHHHCCCCE VLVVPSFTSARAGYTRVRVGSLARALENQFYAVHAPLIADAAWTYAVEEAVGRASVYAPA EEEEECCCCCCCCCCEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCC DHGLPETGIVAEGEWNTPGWLVTDLDLELIRRVREDGHVLNWRDRHAGQTRPGPAEVVQL CCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHH GVAVYG HHHCCC >Mature Secondary Structure SVLRVAAAAYPVDFHPGWAAYEAKVTAWVADAAGRGARLLVFPEYASLELISLLPPELH CHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCHHH HDILALRPALQAFLPEFLALHARLARQHGVGLVAGSFPVAQGGGYVNRAYVFGPNGAQHW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHH QDKLLMTRFEAEEWQIDPGTGVRVFELPLTGEEALRFGVAVCYDSEFPTLARQLAEGGAE HHHHHHHEECCCCEEECCCCCEEEEEECCCHHHHHHHCEEEEECCCCHHHHHHHHCCCCE VLVVPSFTSARAGYTRVRVGSLARALENQFYAVHAPLIADAAWTYAVEEAVGRASVYAPA EEEEECCCCCCCCCCEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCC DHGLPETGIVAEGEWNTPGWLVTDLDLELIRRVREDGHVLNWRDRHAGQTRPGPAEVVQL CCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHH GVAVYG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]