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The map label for this gene is yigC [C]

Identifier: 94986339

GI number: 94986339

Start: 2362180

End: 2364045

Strand: Reverse

Name: yigC [C]

Synonym: Dgeo_2240

Alternate gene names: 94986339

Gene position: 2364045-2362180 (Counterclockwise)

Preceding gene: 94986341

Following gene: 94986337

Centisome position: 95.82

GC content: 65.22

Gene sequence:

>1866_bases
ATGTTCCTGCCAGCCAGGCCAGCTTCGGCCCCACGCAGCCCTGATCTGCAGAGTTTTCTCCGCCTCCTGGAGGAACGCGG
CGAACTCGTGCGCGTGTCCATTCCGGTTGACCGCGAACTCGAAATCACCGAGATTGCCGACCGTCTCGTCAAGCAAGGCG
GCCCGGCCGTCTTGTTCGAGCACGTGAAGGGGAGCCCCTTTCCCCTGGTGATCGGCCTGCTGGGCACCCGTGAGCGCACG
GCCCGGGCCCTGGGTGTGGCTGACCTCGACGACCTCGCCCGGAAGGTCCGGCACCTGATGGATCTCAAAGGGGGTGGCGG
TCTGAGCGGTCTGCTGGGCAACGTGGGCAAGTTGCGCGACGCGCTCCATCTGCCCCCGCGGCGTGTTCGGTCCGGTCCAG
CGCAGGAGATCATATGGACGGGAGATGAGGTGGACCTTTCCAAACTCCCGGTCCTGAAGTGCTGGCCGCTCGACGGCGGG
CCGTTCATCACGCTGCCTCTGGTGATGACCCGCGACCCCGAGACGGGCGAACGCAACATGGGGATGTACCGCATGCAGGT
GATGGGTCGGAATGTCACGGGGATGCACTGGCAGCGCCACAAGACCGGGACCCGGCACCTGGAAAAGGCGCGCCGCCTAG
GGCAAAAGTTGCCCGTTGCGGTGGCTCTTGGAGGAGACCCAGCCCTGATCTACGCGGCGACCGCTCCGCTGCCTCCCATT
CCCGGCCTCGACGAGTACGCTCTGGCGGGCTACCTACGCGGCGAGCGCTACCCCGTGATGAGGGGCGTGACGGTCGACCT
GGACGTTCCGGCCAACGCTGAATTTATCCTCGAAGGCTACGTGGATCCGCAAGAAGAGTGGGCGGTAGAAGGACCCTTTG
GGGACCATACCGGCTTCTACACCCTCCCCGACCGCTACCCGCGCTTTCACGTCACGGCGATCACCATGCGCCGCAACCCG
GTTTATCCGGCCACCATCGTGGGCCGTCCGCCGATGGAGGATGCCTATCTGATCGAGGCCAGCGAGCGGCTCTTCCTGCC
CGCCGCGCAGATGATCTTGCCGGAAATTGTGGACTACCATATGCCGCCCGCCGGAGTCGCCCACAACCTTGTCGTGGTCA
GCATCAAGAAGAGTTATCCCGGCCAGGCCTACAAGGTCGCCCAGGGGCTTCTCGGTCTGGGCCAGATGATGTTTGCCAAG
GTGGTTGTCGTCGTGGACGAGGACGTGCAGGTGAATGACTTTGCTGCAGTCTGGCGCGAGGTGACAGCCAGGGCCGTGCC
AGGCCGCGATACCCTGATTACCCGTGGTCCGGTCGACGTGCTCGACCACTCCAGCCGCGGGTGGGGCTACGGCGGCAAGC
TGATCATTGACGCCACCACCAAACTTCCTGAGGAGATCGGCAGCGCCGTCAGCAGCCGAGAGGAGCTGGGCAGGGAAGGC
AGGGTAGAGCCGCTTTTTGTGCCGCGTGTTGCCGTAGACCTTCCCAACTATGAGGGTGTCTTGGCCCAGCGGCAGACCCC
GGATGGCTACTGGTCTGTGGCCCTGCACAAGACCCGCGCTGGCCAGTCCCAGGCCCTCGCGCAAGCCTTTGCCGCGCACC
CCGCCGCCTCGGGAGTGCGCCACCTCCTGATCGCGGACGAACAGACTGACGTGCACAACACGCAGGATGTGTGGTGGACC
GTTCTCAACAACATTGATCCTGAGCGCGACGTGCGTCAGCTCGGGGGACTGCTCGTTTGGGACGGCTCGCGCAAGCTGTC
TGAGGAGGGCTTCGTCCGCACGTGGCCTCCCAAGATCGAGATGACACCTGAGGTGCGGCGCCGGGTGGACGCCCGCTGGC
ACCTGTACGGCCTGCCCGAGCTGTAG

Upstream 100 bases:

>100_bases
AGGGCAGACCGGCTGCCCAGAGCTGGACCATCGCCGGAGGGAAACAGCGTAGGTCGGAGAGGGTACGGTTGCCCCGCCCC
CTTGCCCCTAGACTCGCCTT

Downstream 100 bases:

>100_bases
CCTTAGGTCGCGTTGTGCTTTTGGGCGGCACCTTTCATTTTTTGTCCAAGCTCGGGTAGGGGGTGTTGACATATCTGAAG
GGGGGGCGTATATTTTTTTT

Product: carboxylyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MFLPARPASAPRSPDLQSFLRLLEERGELVRVSIPVDRELEITEIADRLVKQGGPAVLFEHVKGSPFPLVIGLLGTRERT
ARALGVADLDDLARKVRHLMDLKGGGGLSGLLGNVGKLRDALHLPPRRVRSGPAQEIIWTGDEVDLSKLPVLKCWPLDGG
PFITLPLVMTRDPETGERNMGMYRMQVMGRNVTGMHWQRHKTGTRHLEKARRLGQKLPVAVALGGDPALIYAATAPLPPI
PGLDEYALAGYLRGERYPVMRGVTVDLDVPANAEFILEGYVDPQEEWAVEGPFGDHTGFYTLPDRYPRFHVTAITMRRNP
VYPATIVGRPPMEDAYLIEASERLFLPAAQMILPEIVDYHMPPAGVAHNLVVVSIKKSYPGQAYKVAQGLLGLGQMMFAK
VVVVVDEDVQVNDFAAVWREVTARAVPGRDTLITRGPVDVLDHSSRGWGYGGKLIIDATTKLPEEIGSAVSSREELGREG
RVEPLFVPRVAVDLPNYEGVLAQRQTPDGYWSVALHKTRAGQSQALAQAFAAHPAASGVRHLLIADEQTDVHNTQDVWWT
VLNNIDPERDVRQLGGLLVWDGSRKLSEEGFVRTWPPKIEMTPEVRRRVDARWHLYGLPEL

Sequences:

>Translated_621_residues
MFLPARPASAPRSPDLQSFLRLLEERGELVRVSIPVDRELEITEIADRLVKQGGPAVLFEHVKGSPFPLVIGLLGTRERT
ARALGVADLDDLARKVRHLMDLKGGGGLSGLLGNVGKLRDALHLPPRRVRSGPAQEIIWTGDEVDLSKLPVLKCWPLDGG
PFITLPLVMTRDPETGERNMGMYRMQVMGRNVTGMHWQRHKTGTRHLEKARRLGQKLPVAVALGGDPALIYAATAPLPPI
PGLDEYALAGYLRGERYPVMRGVTVDLDVPANAEFILEGYVDPQEEWAVEGPFGDHTGFYTLPDRYPRFHVTAITMRRNP
VYPATIVGRPPMEDAYLIEASERLFLPAAQMILPEIVDYHMPPAGVAHNLVVVSIKKSYPGQAYKVAQGLLGLGQMMFAK
VVVVVDEDVQVNDFAAVWREVTARAVPGRDTLITRGPVDVLDHSSRGWGYGGKLIIDATTKLPEEIGSAVSSREELGREG
RVEPLFVPRVAVDLPNYEGVLAQRQTPDGYWSVALHKTRAGQSQALAQAFAAHPAASGVRHLLIADEQTDVHNTQDVWWT
VLNNIDPERDVRQLGGLLVWDGSRKLSEEGFVRTWPPKIEMTPEVRRRVDARWHLYGLPEL
>Mature_621_residues
MFLPARPASAPRSPDLQSFLRLLEERGELVRVSIPVDRELEITEIADRLVKQGGPAVLFEHVKGSPFPLVIGLLGTRERT
ARALGVADLDDLARKVRHLMDLKGGGGLSGLLGNVGKLRDALHLPPRRVRSGPAQEIIWTGDEVDLSKLPVLKCWPLDGG
PFITLPLVMTRDPETGERNMGMYRMQVMGRNVTGMHWQRHKTGTRHLEKARRLGQKLPVAVALGGDPALIYAATAPLPPI
PGLDEYALAGYLRGERYPVMRGVTVDLDVPANAEFILEGYVDPQEEWAVEGPFGDHTGFYTLPDRYPRFHVTAITMRRNP
VYPATIVGRPPMEDAYLIEASERLFLPAAQMILPEIVDYHMPPAGVAHNLVVVSIKKSYPGQAYKVAQGLLGLGQMMFAK
VVVVVDEDVQVNDFAAVWREVTARAVPGRDTLITRGPVDVLDHSSRGWGYGGKLIIDATTKLPEEIGSAVSSREELGREG
RVEPLFVPRVAVDLPNYEGVLAQRQTPDGYWSVALHKTRAGQSQALAQAFAAHPAASGVRHLLIADEQTDVHNTQDVWWT
VLNNIDPERDVRQLGGLLVWDGSRKLSEEGFVRTWPPKIEMTPEVRRRVDARWHLYGLPEL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=489, Percent_Identity=41.9222903885481, Blast_Score=373, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6320748, Length=473, Percent_Identity=24.5243128964059, Blast_Score=95, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 68736; Mature: 68736

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPARPASAPRSPDLQSFLRLLEERGELVRVSIPVDRELEITEIADRLVKQGGPAVLFE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
HVKGSPFPLVIGLLGTRERTARALGVADLDDLARKVRHLMDLKGGGGLSGLLGNVGKLRD
CCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
ALHLPPRRVRSGPAQEIIWTGDEVDLSKLPVLKCWPLDGGPFITLPLVMTRDPETGERNM
HHCCCHHHHCCCCCCEEEECCCCCCHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCCCC
GMYRMQVMGRNVTGMHWQRHKTGTRHLEKARRLGQKLPVAVALGGDPALIYAATAPLPPI
CEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCC
PGLDEYALAGYLRGERYPVMRGVTVDLDVPANAEFILEGYVDPQEEWAVEGPFGDHTGFY
CCCCHHHHHHHHCCCCCEEEECEEEEEECCCCCEEEEECCCCCHHHEEEECCCCCCCCEE
TLPDRYPRFHVTAITMRRNPVYPATIVGRPPMEDAYLIEASERLFLPAAQMILPEIVDYH
ECCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCC
MPPAGVAHNLVVVSIKKSYPGQAYKVAQGLLGLGQMMFAKVVVVVDEDVQVNDFAAVWRE
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH
VTARAVPGRDTLITRGPVDVLDHSSRGWGYGGKLIIDATTKLPEEIGSAVSSREELGREG
HHHHCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHHCCCC
RVEPLFVPRVAVDLPNYEGVLAQRQTPDGYWSVALHKTRAGQSQALAQAFAAHPAASGVR
CCCCEEECEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHCCE
HLLIADEQTDVHNTQDVWWTVLNNIDPERDVRQLGGLLVWDGSRKLSEEGFVRTWPPKIE
EEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCCCCCCEEECCCCCC
MTPEVRRRVDARWHLYGLPEL
CCHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MFLPARPASAPRSPDLQSFLRLLEERGELVRVSIPVDRELEITEIADRLVKQGGPAVLFE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
HVKGSPFPLVIGLLGTRERTARALGVADLDDLARKVRHLMDLKGGGGLSGLLGNVGKLRD
CCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
ALHLPPRRVRSGPAQEIIWTGDEVDLSKLPVLKCWPLDGGPFITLPLVMTRDPETGERNM
HHCCCHHHHCCCCCCEEEECCCCCCHHHCCEEEEEECCCCCEEEEEEEEECCCCCCCCCC
GMYRMQVMGRNVTGMHWQRHKTGTRHLEKARRLGQKLPVAVALGGDPALIYAATAPLPPI
CEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCC
PGLDEYALAGYLRGERYPVMRGVTVDLDVPANAEFILEGYVDPQEEWAVEGPFGDHTGFY
CCCCHHHHHHHHCCCCCEEEECEEEEEECCCCCEEEEECCCCCHHHEEEECCCCCCCCEE
TLPDRYPRFHVTAITMRRNPVYPATIVGRPPMEDAYLIEASERLFLPAAQMILPEIVDYH
ECCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCC
MPPAGVAHNLVVVSIKKSYPGQAYKVAQGLLGLGQMMFAKVVVVVDEDVQVNDFAAVWRE
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHH
VTARAVPGRDTLITRGPVDVLDHSSRGWGYGGKLIIDATTKLPEEIGSAVSSREELGREG
HHHHCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHHCCCC
RVEPLFVPRVAVDLPNYEGVLAQRQTPDGYWSVALHKTRAGQSQALAQAFAAHPAASGVR
CCCCEEECEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHCCE
HLLIADEQTDVHNTQDVWWTVLNNIDPERDVRQLGGLLVWDGSRKLSEEGFVRTWPPKIE
EEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCCCCCCEEECCCCCC
MTPEVRRRVDARWHLYGLPEL
CCHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]