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The map label for this gene is ykhA [H]

Identifier: 94986263

GI number: 94986263

Start: 2280616

End: 2281146

Strand: Reverse

Name: ykhA [H]

Synonym: Dgeo_2164

Alternate gene names: 94986263

Gene position: 2281146-2280616 (Counterclockwise)

Preceding gene: 94986270

Following gene: 94986262

Centisome position: 92.46

GC content: 68.55

Gene sequence:

>531_bases
TTGCCTGCCTCCTTTGCCCGCCGGGCAACGCATGAAAGGCGCCCCTGGCCGCAGCCCGCTCGCCCGCTACACTCGGACGC
GATGTCTGAATCTCCCTCTCCCGCCCGGCCCATCACCCCCGCCCCGCGCAGCCGCGCCCGGATGCTCGAACTGGTGTTTC
CCAAGGACACCAACTATCTGGGCACGGCGTTTGGCGGCTTTGTGTTGTCACTGATGGACAAGGCAGCCAGTGTCGCGGCG
GTGCGGCACGCGCGCGGCGCGGTTGTGACGGCCCGCATGGACGGCGTGGACTTTCATGTCCCCATCCGGGTCGGGGATGC
CGTGGCCCTCGACGCGCGGGTGGTGAAGGTGGGCCGCTCCTCCATGACGATCCAGGTGGACGTGTTTCGCGAGAACATGG
CCTCGGGCGAACAGCAGCTCGCCACCACCGGCTTTTTCGTCTTTGTTGCGGTGGATGAACACGGAAAGCCGCGCCCGGTG
CCGCCCCTCGCGGACGACGAGGGCGGAGCCGAAGCCGACGACCGGCCCTGA

Upstream 100 bases:

>100_bases
AAAACCGCAGAAAGCTGGAGCAGGACGGGCCGCCTTGGCCCTGGACGCAGTACAAGTTGGGTGTAAGTGTCATGCTGGCA
TGGGGAGCGGAGACTGTCAA

Downstream 100 bases:

>100_bases
CGTTCAGCCCCGAGCGTCTTTCAGCGCCAAAGACCGGCGGTTCTGGCAAGAGGAGGGCGCGTCTTGGCCGCGTTAAGCTC
AGCCTATGCTGACGCTCGCG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPASFARRATHERRPWPQPARPLHSDAMSESPSPARPITPAPRSRARMLELVFPKDTNYLGTAFGGFVLSLMDKAASVAA
VRHARGAVVTARMDGVDFHVPIRVGDAVALDARVVKVGRSSMTIQVDVFRENMASGEQQLATTGFFVFVAVDEHGKPRPV
PPLADDEGGAEADDRP

Sequences:

>Translated_176_residues
MPASFARRATHERRPWPQPARPLHSDAMSESPSPARPITPAPRSRARMLELVFPKDTNYLGTAFGGFVLSLMDKAASVAA
VRHARGAVVTARMDGVDFHVPIRVGDAVALDARVVKVGRSSMTIQVDVFRENMASGEQQLATTGFFVFVAVDEHGKPRPV
PPLADDEGGAEADDRP
>Mature_175_residues
PASFARRATHERRPWPQPARPLHSDAMSESPSPARPITPAPRSRARMLELVFPKDTNYLGTAFGGFVLSLMDKAASVAAV
RHARGAVVTARMDGVDFHVPIRVGDAVALDARVVKVGRSSMTIQVDVFRENMASGEQQLATTGFFVFVAVDEHGKPRPVP
PLADDEGGAEADDRP

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI75709208, Length=122, Percent_Identity=32.7868852459016, Blast_Score=80, Evalue=9e-16,
Organism=Homo sapiens, GI32528282, Length=122, Percent_Identity=32.7868852459016, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI32528284, Length=122, Percent_Identity=32.7868852459016, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI32528286, Length=122, Percent_Identity=32.7868852459016, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI22165400, Length=136, Percent_Identity=28.6764705882353, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI22165355, Length=136, Percent_Identity=28.6764705882353, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1787506, Length=123, Percent_Identity=39.8373983739837, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 19011; Mature: 18880

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASFARRATHERRPWPQPARPLHSDAMSESPSPARPITPAPRSRARMLELVFPKDTNYL
CCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCH
GTAFGGFVLSLMDKAASVAAVRHARGAVVTARMDGVDFHVPIRVGDAVALDARVVKVGRS
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCEEEECCEEEEECCC
SMTIQVDVFRENMASGEQQLATTGFFVFVAVDEHGKPRPVPPLADDEGGAEADDRP
CEEEEEEEEHHHHCCCHHHHEECEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PASFARRATHERRPWPQPARPLHSDAMSESPSPARPITPAPRSRARMLELVFPKDTNYL
CCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCH
GTAFGGFVLSLMDKAASVAAVRHARGAVVTARMDGVDFHVPIRVGDAVALDARVVKVGRS
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEECCEEEECCEEEEECCC
SMTIQVDVFRENMASGEQQLATTGFFVFVAVDEHGKPRPVPPLADDEGGAEADDRP
CEEEEEEEEHHHHCCCHHHHEECEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377; 10568751 [H]