| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yccK [H]
Identifier: 94986270
GI number: 94986270
Start: 2286336
End: 2287310
Strand: Reverse
Name: yccK [H]
Synonym: Dgeo_2171
Alternate gene names: 94986270
Gene position: 2287310-2286336 (Counterclockwise)
Preceding gene: 94986271
Following gene: 94986263
Centisome position: 92.71
GC content: 67.18
Gene sequence:
>975_bases ATGCAACACCGCAAGCTGCGCGAGCTTACCGTTTCCGCCCTGGGCCTGGGCTGCATGGGCATGAGCGAGTTCTACGGCGA GGCCGACGAGCAGGAGTCCATCCGGGTGATCCACCGGGCGCTCGACCTGGGCGTGACCTTTTTGGACACCGCCGACATGT ACGGTGTGGGCCGCAACGAGGAGCTGGTGGGGCGCGCCATTCGGGGTCGTCGGGACGAGGTGGTGCTGGCGACCAAGTTT GGCAACGTGCGGGGGCCGAACGGGGAACGCCTGGGCATCAACGGCCGCCCCGAGTATGTGCGCCAGGCCTGTGACGCCAG CCTGAAGCGGCTGGGAGTCGACCACATCGACCTGTACTACCAGCACCGCGTGGACCCCGACACGCCCATCGAGGAGACGG TGGGGGCGATGGCTGAGCTGGTGCATGCGGGCAAGGTGCGCTTCCTGGGCCTCTCCGAGGCGTCGGCCGCGACCCTGCGC CGCGCCAACGCCGTGCATCCCATCACCGCCCTTCAGAGCGAGTATTCCCTGTGGACCCGCGACCCGGAAGAGGAAGTGCT GCCCACCTGCCGCGAGCTGGGCATCGGGTTCGTGGCGTATAGCCCCCTGGGACGCGGCTTTCTGAGCGGTCAGTTCCGGT CGCCGGAGGATCTGCCCGCGGACGACTTCCGCCGCCACAATCCCCGCTTCCAGGGAGAGAACTTCCAGAAGAACTTGCGT CTGGTTGAGGCCGTGCAGGACATGGCGCGCGAGAAGGGCTGCACGGCCTCGCAGCTCGCGCTGGCCTGGCTGCTCGCGCA GGGGAACGACATCGTGCCGATTCCCGGCACCAAGCGGGTGAAGTACCTGGAAGACAATCTGGGCGCGCTGGACGTCCATC TGAATGCGGACGATCTGGCGCAGCTCGAAGCCGTGTTCCCGATGGGTGCCGCCGCCGGAGAGCGTTACCCAGACATGAGC AGTGTCAACCGCTAG
Upstream 100 bases:
>100_bases ACTGGCGGCTTCTGCAGGGCCGATGCTTTAAGCCTTGCTCAAGCCGCCTCATGACGGAAGGTGCCCGCCAAGGCGCAGCC TCAGCTTCAGGAGGTCAGAC
Downstream 100 bases:
>100_bases GGTGCCTCTTCCCGTTGAGCTTCCTGTTCAGTGCCTGCTTAGTGCCCGCTTAGTGCCCGCTTGTCGCCTTGAGGCCAATG ATCGCCACGATCATCATGCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQHRKLRELTVSALGLGCMGMSEFYGEADEQESIRVIHRALDLGVTFLDTADMYGVGRNEELVGRAIRGRRDEVVLATKF GNVRGPNGERLGINGRPEYVRQACDASLKRLGVDHIDLYYQHRVDPDTPIEETVGAMAELVHAGKVRFLGLSEASAATLR RANAVHPITALQSEYSLWTRDPEEEVLPTCRELGIGFVAYSPLGRGFLSGQFRSPEDLPADDFRRHNPRFQGENFQKNLR LVEAVQDMAREKGCTASQLALAWLLAQGNDIVPIPGTKRVKYLEDNLGALDVHLNADDLAQLEAVFPMGAAAGERYPDMS SVNR
Sequences:
>Translated_324_residues MQHRKLRELTVSALGLGCMGMSEFYGEADEQESIRVIHRALDLGVTFLDTADMYGVGRNEELVGRAIRGRRDEVVLATKF GNVRGPNGERLGINGRPEYVRQACDASLKRLGVDHIDLYYQHRVDPDTPIEETVGAMAELVHAGKVRFLGLSEASAATLR RANAVHPITALQSEYSLWTRDPEEEVLPTCRELGIGFVAYSPLGRGFLSGQFRSPEDLPADDFRRHNPRFQGENFQKNLR LVEAVQDMAREKGCTASQLALAWLLAQGNDIVPIPGTKRVKYLEDNLGALDVHLNADDLAQLEAVFPMGAAAGERYPDMS SVNR >Mature_324_residues MQHRKLRELTVSALGLGCMGMSEFYGEADEQESIRVIHRALDLGVTFLDTADMYGVGRNEELVGRAIRGRRDEVVLATKF GNVRGPNGERLGINGRPEYVRQACDASLKRLGVDHIDLYYQHRVDPDTPIEETVGAMAELVHAGKVRFLGLSEASAATLR RANAVHPITALQSEYSLWTRDPEEEVLPTCRELGIGFVAYSPLGRGFLSGQFRSPEDLPADDFRRHNPRFQGENFQKNLR LVEAVQDMAREKGCTASQLALAWLLAQGNDIVPIPGTKRVKYLEDNLGALDVHLNADDLAQLEAVFPMGAAAGERYPDMS SVNR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=309, Percent_Identity=30.42071197411, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI27436964, Length=306, Percent_Identity=29.4117647058824, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI27436969, Length=321, Percent_Identity=27.1028037383178, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=27.1028037383178, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI27436962, Length=309, Percent_Identity=30.0970873786408, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27436971, Length=306, Percent_Identity=28.1045751633987, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI223718702, Length=302, Percent_Identity=30.794701986755, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI41327764, Length=277, Percent_Identity=32.129963898917, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI41152114, Length=306, Percent_Identity=29.0849673202614, Blast_Score=88, Evalue=8e-18, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=36.1963190184049, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1788070, Length=306, Percent_Identity=34.640522875817, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789375, Length=306, Percent_Identity=32.3529411764706, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1788081, Length=325, Percent_Identity=28, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=31.1428571428571, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787674, Length=305, Percent_Identity=27.5409836065574, Blast_Score=106, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17564128, Length=332, Percent_Identity=23.4939759036145, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323998, Length=326, Percent_Identity=26.3803680981595, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319958, Length=305, Percent_Identity=25.5737704918033, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=326, Percent_Identity=25.4601226993865, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325384, Length=336, Percent_Identity=25.8928571428571, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6325169, Length=328, Percent_Identity=25.9146341463415, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322615, Length=260, Percent_Identity=26.5384615384615, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI45553081, Length=318, Percent_Identity=28.3018867924528, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI281366140, Length=289, Percent_Identity=28.3737024221453, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24657054, Length=323, Percent_Identity=25.3869969040248, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI20129731, Length=319, Percent_Identity=27.8996865203762, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646155, Length=307, Percent_Identity=25.7328990228013, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24640980, Length=328, Percent_Identity=22.2560975609756, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI45549126, Length=328, Percent_Identity=22.2560975609756, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646159, Length=222, Percent_Identity=27.9279279279279, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35889; Mature: 35889
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRKLRELTVSALGLGCMGMSEFYGEADEQESIRVIHRALDLGVTFLDTADMYGVGRNE CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEECHHHHCCCCCH ELVGRAIRGRRDEVVLATKFGNVRGPNGERLGINGRPEYVRQACDASLKRLGVDHIDLYY HHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHH QHRVDPDTPIEETVGAMAELVHAGKVRFLGLSEASAATLRRANAVHPITALQSEYSLWTR HCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCC DPEEEVLPTCRELGIGFVAYSPLGRGFLSGQFRSPEDLPADDFRRHNPRFQGENFQKNLR CCHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH LVEAVQDMAREKGCTASQLALAWLLAQGNDIVPIPGTKRVKYLEDNLGALDVHLNADDLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHCCCCEEEEEECHHHHH QLEAVFPMGAAAGERYPDMSSVNR HHHHHCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MQHRKLRELTVSALGLGCMGMSEFYGEADEQESIRVIHRALDLGVTFLDTADMYGVGRNE CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEECHHHHCCCCCH ELVGRAIRGRRDEVVLATKFGNVRGPNGERLGINGRPEYVRQACDASLKRLGVDHIDLYY HHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCHHHHHHH QHRVDPDTPIEETVGAMAELVHAGKVRFLGLSEASAATLRRANAVHPITALQSEYSLWTR HCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCC DPEEEVLPTCRELGIGFVAYSPLGRGFLSGQFRSPEDLPADDFRRHNPRFQGENFQKNLR CCHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH LVEAVQDMAREKGCTASQLALAWLLAQGNDIVPIPGTKRVKYLEDNLGALDVHLNADDLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHCCCCEEEEEECHHHHH QLEAVFPMGAAAGERYPDMSSVNR HHHHHCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]