| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is maeA [H]
Identifier: 94986253
GI number: 94986253
Start: 2268909
End: 2270645
Strand: Reverse
Name: maeA [H]
Synonym: Dgeo_2154
Alternate gene names: 94986253
Gene position: 2270645-2268909 (Counterclockwise)
Preceding gene: 94986254
Following gene: 94986248
Centisome position: 92.03
GC content: 66.03
Gene sequence:
>1737_bases ATGGCGCACATCTCCCGCTACTACGATGTGAAACGTGACCCTGCCGGGCACCGTGTGCTGGAAGTGCGGGTAACCGGTTT TCCGCTGCTGCATCTGCCGCTGCTCAACAAGTCGACGGCCTTCACCGAAGAGGAACGCCGCCTGCTGGGCTTGGAGGGGC TGCTGCCGCCCGGCGTCAGCACCTTGGGGGAGCAGAAGGAGCGGGCCTACCTGCGGTTTCGCCAACAGGGCACACCGCTG GAAAAGCACGCCTACCTGCGCAACCTGCAGGACTACAACGAGGTGCTGTTTTTCGCCCTGCTGGAAAACCACCTCGAGGA GATGCTGCCCATCATCTACACCCCCACGGTGGGCGACGCGGTGCGGGAGTTCTCGCGGCTGTACCGCTATCCGCGCGGTT TTGCGCTGAGCACGGCGCATGTGGGGCGGGTGCGCGAACTCCTGGACAATGTCCATCAGCAGGACGTGCGGATGATCGTG GCAACTGATTCCAGCGCGATTTTGGGCATCGGCGACCAAGGCTTTGGGGGCATGGCGATCTCCATCGGCAAGCTCAGCCT GTACACGGTCGCGGGCGGAGTGGGCCCCGACAAGACGCTGCCGGTCGAGTTGGACGTCGGCACGGGCCGCCAGGATCTGA TTGAAGACCCCCTCTACCTGGGGGCTCGCCACCCTCGCTTGACCGGCGAGGCGTATGACGCGTTCCTGGACGCCTTTGTG GAGGCCGTGAGGGACCGTTATCCCAAGGCGATCATCCAGTGGGAGGACTTCTCGAAGGACACAGCCTTCCGGGTGCTGGA GCGCTACCGCAAGGTGGTGCCGAGTTTCAATGACGATATTCAGGGCACCGGCGCGGTCACCTTGGCAGGTGTGCTGCGAG CCTGCGCGCTTAAGGGCGAACAGCTCCGCGAGCAGGTGATTGTGATTCACGGAGCGGGTGCCGGAGGTGCCGGTGTCGCC GCCGCGATCCGTGAGGGGATGCGGCAGGAGGGGCTGGGCGAGGACGAAATTGCCCGCCGGGTCTTTGTCCTCGATTCGCG CGGCCTCCTGACCGATGACCGCTCGCTGGAGGCCTACAAGCAGCCGCTCGCCACACCGAAGCGCCTCACCGACGGCTGGA CAGGAACCGACCTCCTGAGCGTGGTGCGGGAGGCGGGAGCGACCGTGCTGCTGGGCCTCAGCGGACAGGGTGGCATCTTC AACGAACCCATCGTGCGTGCGGTGCATGCCCAGACGGCCCGGCCCGTCGTCTTTCCGCTCTCTAACCCCACGGCCAACAC CGAGGCCCTGCCGGAAGACATCCTGCGCTGGACAGACGGCGCCGCCATCGTGGCGACCGGCAGTCCCTTCCCGGACGTGA CGTTGAACGGCCAGACGCACGTGATCGGGCAGGGCAACAACGCCTTCATCTTTCCCGGCCTGGGCCTTGCCGCTGTTCTC ACTCGCGCCTCGGAGATCACAGACGGGATGGTGGCCGAGGCGGCCTATGCGCTGGCCGACTTCACGGCCCGCACCTATCC CGAACGCACCTATCCGCCCACCCGCGCCCTACGCGACGCCAGCCGTGCCGTTGCCCTGCGGGTAGCTCGCAAAGCCATTC TGGAAGGCGTCGCCCGCGAGGAAAAGGTGCAGGGCCTCGACGACGACGCCCTCGCCGCCTTTATCGACAGCCGTTTCTGG GTGCCAAAGTATCTGCCGTACCGCATGGCGGAGGGAGCCGGGCCGGATCTGGGGTGA
Upstream 100 bases:
>100_bases CCCAAGTACCTGCCGCTCCGGAAGGCGGCGGGGGCGCGTGACTGAAACCTCTGCTCTAGGCAGGCTGGCCACGGCGTACG TCCCCTGGCTAGGCTGAGGC
Downstream 100 bases:
>100_bases GGGCGGCCCAGCGAGCAGCCAGAAAGGCAAAGCAAAAGGTGCAAAGCCTCCGCTTCGGCGGAGGCTTTTGCATCGTGCAT CGTCTCTGGCCATTAACTGG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MAHISRYYDVKRDPAGHRVLEVRVTGFPLLHLPLLNKSTAFTEEERRLLGLEGLLPPGVSTLGEQKERAYLRFRQQGTPL EKHAYLRNLQDYNEVLFFALLENHLEEMLPIIYTPTVGDAVREFSRLYRYPRGFALSTAHVGRVRELLDNVHQQDVRMIV ATDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTGRQDLIEDPLYLGARHPRLTGEAYDAFLDAFV EAVRDRYPKAIIQWEDFSKDTAFRVLERYRKVVPSFNDDIQGTGAVTLAGVLRACALKGEQLREQVIVIHGAGAGGAGVA AAIREGMRQEGLGEDEIARRVFVLDSRGLLTDDRSLEAYKQPLATPKRLTDGWTGTDLLSVVREAGATVLLGLSGQGGIF NEPIVRAVHAQTARPVVFPLSNPTANTEALPEDILRWTDGAAIVATGSPFPDVTLNGQTHVIGQGNNAFIFPGLGLAAVL TRASEITDGMVAEAAYALADFTARTYPERTYPPTRALRDASRAVALRVARKAILEGVAREEKVQGLDDDALAAFIDSRFW VPKYLPYRMAEGAGPDLG
Sequences:
>Translated_578_residues MAHISRYYDVKRDPAGHRVLEVRVTGFPLLHLPLLNKSTAFTEEERRLLGLEGLLPPGVSTLGEQKERAYLRFRQQGTPL EKHAYLRNLQDYNEVLFFALLENHLEEMLPIIYTPTVGDAVREFSRLYRYPRGFALSTAHVGRVRELLDNVHQQDVRMIV ATDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTGRQDLIEDPLYLGARHPRLTGEAYDAFLDAFV EAVRDRYPKAIIQWEDFSKDTAFRVLERYRKVVPSFNDDIQGTGAVTLAGVLRACALKGEQLREQVIVIHGAGAGGAGVA AAIREGMRQEGLGEDEIARRVFVLDSRGLLTDDRSLEAYKQPLATPKRLTDGWTGTDLLSVVREAGATVLLGLSGQGGIF NEPIVRAVHAQTARPVVFPLSNPTANTEALPEDILRWTDGAAIVATGSPFPDVTLNGQTHVIGQGNNAFIFPGLGLAAVL TRASEITDGMVAEAAYALADFTARTYPERTYPPTRALRDASRAVALRVARKAILEGVAREEKVQGLDDDALAAFIDSRFW VPKYLPYRMAEGAGPDLG >Mature_577_residues AHISRYYDVKRDPAGHRVLEVRVTGFPLLHLPLLNKSTAFTEEERRLLGLEGLLPPGVSTLGEQKERAYLRFRQQGTPLE KHAYLRNLQDYNEVLFFALLENHLEEMLPIIYTPTVGDAVREFSRLYRYPRGFALSTAHVGRVRELLDNVHQQDVRMIVA TDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTGRQDLIEDPLYLGARHPRLTGEAYDAFLDAFVE AVRDRYPKAIIQWEDFSKDTAFRVLERYRKVVPSFNDDIQGTGAVTLAGVLRACALKGEQLREQVIVIHGAGAGGAGVAA AIREGMRQEGLGEDEIARRVFVLDSRGLLTDDRSLEAYKQPLATPKRLTDGWTGTDLLSVVREAGATVLLGLSGQGGIFN EPIVRAVHAQTARPVVFPLSNPTANTEALPEDILRWTDGAAIVATGSPFPDVTLNGQTHVIGQGNNAFIFPGLGLAAVLT RASEITDGMVAEAAYALADFTARTYPERTYPPTRALRDASRAVALRVARKAILEGVAREEKVQGLDDDALAAFIDSRFWV PKYLPYRMAEGAGPDLG
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=531, Percent_Identity=39.1713747645951, Blast_Score=384, Evalue=1e-106, Organism=Homo sapiens, GI62420882, Length=559, Percent_Identity=37.7459749552773, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI62420880, Length=559, Percent_Identity=37.7459749552773, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI239049447, Length=559, Percent_Identity=37.7459749552773, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI4505145, Length=555, Percent_Identity=37.2972972972973, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI270265879, Length=462, Percent_Identity=39.8268398268398, Blast_Score=342, Evalue=5e-94, Organism=Escherichia coli, GI87081919, Length=559, Percent_Identity=45.438282647585, Blast_Score=470, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17537199, Length=510, Percent_Identity=40, Blast_Score=356, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6322823, Length=567, Percent_Identity=40.9171075837742, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI281362672, Length=566, Percent_Identity=38.5159010600707, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI281362674, Length=566, Percent_Identity=38.5159010600707, Blast_Score=384, Evalue=1e-106, Organism=Drosophila melanogaster, GI21356279, Length=566, Percent_Identity=38.5159010600707, Blast_Score=383, Evalue=1e-106, Organism=Drosophila melanogaster, GI24646386, Length=559, Percent_Identity=37.567084078712, Blast_Score=364, Evalue=1e-100, Organism=Drosophila melanogaster, GI24646388, Length=559, Percent_Identity=37.567084078712, Blast_Score=363, Evalue=1e-100, Organism=Drosophila melanogaster, GI78707242, Length=514, Percent_Identity=35.9922178988327, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI78707238, Length=514, Percent_Identity=35.9922178988327, Blast_Score=324, Evalue=1e-88, Organism=Drosophila melanogaster, GI78707240, Length=511, Percent_Identity=36.0078277886497, Blast_Score=323, Evalue=2e-88, Organism=Drosophila melanogaster, GI78707232, Length=504, Percent_Identity=34.1269841269841, Blast_Score=319, Evalue=4e-87, Organism=Drosophila melanogaster, GI281363505, Length=501, Percent_Identity=34.1317365269461, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI78707236, Length=501, Percent_Identity=34.1317365269461, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI281363503, Length=497, Percent_Identity=34.0040241448692, Blast_Score=315, Evalue=7e-86, Organism=Drosophila melanogaster, GI19922384, Length=523, Percent_Identity=28.2982791586998, Blast_Score=216, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 63138; Mature: 63006
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHISRYYDVKRDPAGHRVLEVRVTGFPLLHLPLLNKSTAFTEEERRLLGLEGLLPPGVS CCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHH TLGEQKERAYLRFRQQGTPLEKHAYLRNLQDYNEVLFFALLENHLEEMLPIIYTPTVGDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHH VREFSRLYRYPRGFALSTAHVGRVRELLDNVHQQDVRMIVATDSSAILGIGDQGFGGMAI HHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCEEEEEEECCCEEEECCCCCCCCEEE SIGKLSLYTVAGGVGPDKTLPVELDVGTGRQDLIEDPLYLGARHPRLTGEAYDAFLDAFV EECCEEEEEEECCCCCCCEEEEEEECCCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHH EAVRDRYPKAIIQWEDFSKDTAFRVLERYRKVVPSFNDDIQGTGAVTLAGVLRACALKGE HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCH QLREQVIVIHGAGAGGAGVAAAIREGMRQEGLGEDEIARRVFVLDSRGLLTDDRSLEAYK HHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCCCCCCHHHHHH QPLATPKRLTDGWTGTDLLSVVREAGATVLLGLSGQGGIFNEPIVRAVHAQTARPVVFPL HCCCCCHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEC SNPTANTEALPEDILRWTDGAAIVATGSPFPDVTLNGQTHVIGQGNNAFIFPGLGLAAVL CCCCCCCHHCHHHHHHHCCCCEEEECCCCCCCEEECCCEEEEECCCCEEEECCCHHHHHH TRASEITDGMVAEAAYALADFTARTYPERTYPPTRALRDASRAVALRVARKAILEGVARE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKVQGLDDDALAAFIDSRFWVPKYLPYRMAEGAGPDLG HHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure AHISRYYDVKRDPAGHRVLEVRVTGFPLLHLPLLNKSTAFTEEERRLLGLEGLLPPGVS CCCHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHH TLGEQKERAYLRFRQQGTPLEKHAYLRNLQDYNEVLFFALLENHLEEMLPIIYTPTVGDA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHH VREFSRLYRYPRGFALSTAHVGRVRELLDNVHQQDVRMIVATDSSAILGIGDQGFGGMAI HHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCEEEEEEECCCEEEECCCCCCCCEEE SIGKLSLYTVAGGVGPDKTLPVELDVGTGRQDLIEDPLYLGARHPRLTGEAYDAFLDAFV EECCEEEEEEECCCCCCCEEEEEEECCCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHH EAVRDRYPKAIIQWEDFSKDTAFRVLERYRKVVPSFNDDIQGTGAVTLAGVLRACALKGE HHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCH QLREQVIVIHGAGAGGAGVAAAIREGMRQEGLGEDEIARRVFVLDSRGLLTDDRSLEAYK HHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCCCCCCHHHHHH QPLATPKRLTDGWTGTDLLSVVREAGATVLLGLSGQGGIFNEPIVRAVHAQTARPVVFPL HCCCCCHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEC SNPTANTEALPEDILRWTDGAAIVATGSPFPDVTLNGQTHVIGQGNNAFIFPGLGLAAVL CCCCCCCHHCHHHHHHHCCCCEEEECCCCCCCEEECCCEEEEECCCCEEEECCCHHHHHH TRASEITDGMVAEAAYALADFTARTYPERTYPPTRALRDASRAVALRVARKAILEGVARE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKVQGLDDDALAAFIDSRFWVPKYLPYRMAEGAGPDLG HHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA