| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is maeA [H]
Identifier: 94986254
GI number: 94986254
Start: 2270701
End: 2272449
Strand: Reverse
Name: maeA [H]
Synonym: Dgeo_2155
Alternate gene names: 94986254
Gene position: 2272449-2270701 (Counterclockwise)
Preceding gene: 94986255
Following gene: 94986253
Centisome position: 92.11
GC content: 64.84
Gene sequence:
>1749_bases ATGCCCGAAGCTCCCCGCGTCTCCCGCTACTATGACGTGAAGCGCGACGAGAACGGCCACCGTTACCTCGACGTGAACGT CACCGGCTTCTCGCTGCTGCATATCCCCCTCCTCAACAAGTCAACCGGATTTACCCGGGAGGAACGCCGCGCGCTGGGGA TCGAGGGCCTGGTGCCGCCGCACCACAGCACCCTGGAGGAGCAGAAACAGCGCACCTACCTGCGGTACCTTCAGCAGACC ACAGACCTGGACAAGCATGAGTTTCTGCGCGCGCTTCAGGACCGCAACGAGGTGCTGTTCTATGCCCTGTTTGCAGATCA CCTCGAGGAGATGCTGCCCATCCTCTACACGCCCACCGTGGGCGAGGCGGTCCGGGTCTTTTCTCACATCTACCGCTATC CGCGCGGCTTTGCGGTCAGTACTGAGGACATCGACCGAGTGGACGAGCTGCTCGAAAACGTGCCCCTCAATGATGTGCGG ATGATTGTGGCAACCGATTCCAGCGCGATTCTGGGCATCGGCGACCAAGGCTTTGGGGGCATGGCGATCTCCATCGGCAA GCTCAGCCTGTACACGGTCGCGGGTGGCGTGGGCCCCGACAAGACGCTGCCGGTTGAGTTGGACGTGGGCACCGATCGCC AGGACCTGATCGACGACCCGCTTTACCTGGGGGTACATCACCGGCGCCTGACGGGACGCGACTACGACGAGTTTCTCGAC CGCTTTGTGGAGGCGACGGTCGCCCGCTATCCCAAGGCGATCATTCAGTGGGAGGACTTCGCGCGCGGCACAGCTTTTCG GGTGCTGGAGCGCTACCGCAAGGTGGTGCCGAGCTTCAATGACGACATTCAGGGCACCGGGGCGATGGCCCTGGCCGGGC TGATCAGCGCGAGCCGGCTCAAGGGGGAGCGGCTGCAAGACCAGACGTTCGTGGTCGTCGGTGCGGGGGCGGGCGGCATC GGCGTGGCGCTGGCCATTCGTCAGGGCCTGATGCGTGAGGGGCTGAGTTACGCCGAGGCGAATGCCCGCGTCTTTGTGGT GGACCGTTACGGCCTGCTGATGCACGGGCAGCCGGGCCTCGAAGAACACCAGCTTTCCTTTGCCCGCTCACCCGAGGATG TGGCGGGCTGGAGCTGTGAGGGCGAGTGGCCCAGCCTGCACGAGACGGTCGTGCGCAGCGGCGCAACGGCCCTGCTCGGC CTGACTGGCGTGCCTGGCCTCTTCCGTCAGCCGACTGTCGAGGCGATGCTGGCGCACACCTCCCGACCCATCGTGTTTCC CCTCTCCAACCCCACCAGCAATGTGGAGGCGCAACCCGCTGACCTGCTGCGCTGGACGAACGGCGCGGCGATCATCGCCA CCGGCAGCCCCTTCCCCGATATCGAATATGGCGGCCAGATGTACAGCATCGGACAGGGGAACAATGCCTTTATCTTCCCC GGCTTGGGCTTTGGCGCTGTGATCAGCCGCGCCCGTGAGATCACAGACGGCATGGTGATGGAGGCCGCGCAAACCCTGGC CGATGAGACGGTGGGGTACGGCAACCGAGTTTATCCGCCCATCAGCGCCATCCGCGAACTCAGCCTCAAGGTGGCCGTCC GCGTGGCTCGGCAGGCCATCAAGGAAGGGGTATGTGCCGAGCGCCGCATCCGCAACCTCACCGATGATGAGCTAGAGGCT TTTGTGCGAGGCCGCCAGTGGGTACCCAAGTACCTGCCGCTCCGGAAGGCGGCGGGGGCGCGTGACTGA
Upstream 100 bases:
>100_bases AGGTGGCAGGCCAGCCGGGACTGAAGATTCTTACATTGCGTAAAAAACCTGCACACGCGCTGGAAGACCTGCCCCCTATC TGGGCTAGACTCCTCAGGTT
Downstream 100 bases:
>100_bases AACCTCTGCTCTAGGCAGGCTGGCCACGGCGTACGTCCCCTGGCTAGGCTGAGGCATGGCGCACATCTCCCGCTACTACG ATGTGAAACGTGACCCTGCC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MPEAPRVSRYYDVKRDENGHRYLDVNVTGFSLLHIPLLNKSTGFTREERRALGIEGLVPPHHSTLEEQKQRTYLRYLQQT TDLDKHEFLRALQDRNEVLFYALFADHLEEMLPILYTPTVGEAVRVFSHIYRYPRGFAVSTEDIDRVDELLENVPLNDVR MIVATDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTDRQDLIDDPLYLGVHHRRLTGRDYDEFLD RFVEATVARYPKAIIQWEDFARGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLISASRLKGERLQDQTFVVVGAGAGGI GVALAIRQGLMREGLSYAEANARVFVVDRYGLLMHGQPGLEEHQLSFARSPEDVAGWSCEGEWPSLHETVVRSGATALLG LTGVPGLFRQPTVEAMLAHTSRPIVFPLSNPTSNVEAQPADLLRWTNGAAIIATGSPFPDIEYGGQMYSIGQGNNAFIFP GLGFGAVISRAREITDGMVMEAAQTLADETVGYGNRVYPPISAIRELSLKVAVRVARQAIKEGVCAERRIRNLTDDELEA FVRGRQWVPKYLPLRKAAGARD
Sequences:
>Translated_582_residues MPEAPRVSRYYDVKRDENGHRYLDVNVTGFSLLHIPLLNKSTGFTREERRALGIEGLVPPHHSTLEEQKQRTYLRYLQQT TDLDKHEFLRALQDRNEVLFYALFADHLEEMLPILYTPTVGEAVRVFSHIYRYPRGFAVSTEDIDRVDELLENVPLNDVR MIVATDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTDRQDLIDDPLYLGVHHRRLTGRDYDEFLD RFVEATVARYPKAIIQWEDFARGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLISASRLKGERLQDQTFVVVGAGAGGI GVALAIRQGLMREGLSYAEANARVFVVDRYGLLMHGQPGLEEHQLSFARSPEDVAGWSCEGEWPSLHETVVRSGATALLG LTGVPGLFRQPTVEAMLAHTSRPIVFPLSNPTSNVEAQPADLLRWTNGAAIIATGSPFPDIEYGGQMYSIGQGNNAFIFP GLGFGAVISRAREITDGMVMEAAQTLADETVGYGNRVYPPISAIRELSLKVAVRVARQAIKEGVCAERRIRNLTDDELEA FVRGRQWVPKYLPLRKAAGARD >Mature_581_residues PEAPRVSRYYDVKRDENGHRYLDVNVTGFSLLHIPLLNKSTGFTREERRALGIEGLVPPHHSTLEEQKQRTYLRYLQQTT DLDKHEFLRALQDRNEVLFYALFADHLEEMLPILYTPTVGEAVRVFSHIYRYPRGFAVSTEDIDRVDELLENVPLNDVRM IVATDSSAILGIGDQGFGGMAISIGKLSLYTVAGGVGPDKTLPVELDVGTDRQDLIDDPLYLGVHHRRLTGRDYDEFLDR FVEATVARYPKAIIQWEDFARGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLISASRLKGERLQDQTFVVVGAGAGGIG VALAIRQGLMREGLSYAEANARVFVVDRYGLLMHGQPGLEEHQLSFARSPEDVAGWSCEGEWPSLHETVVRSGATALLGL TGVPGLFRQPTVEAMLAHTSRPIVFPLSNPTSNVEAQPADLLRWTNGAAIIATGSPFPDIEYGGQMYSIGQGNNAFIFPG LGFGAVISRAREITDGMVMEAAQTLADETVGYGNRVYPPISAIRELSLKVAVRVARQAIKEGVCAERRIRNLTDDELEAF VRGRQWVPKYLPLRKAAGARD
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=552, Percent_Identity=39.6739130434783, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI62420882, Length=549, Percent_Identity=38.615664845173, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI62420880, Length=549, Percent_Identity=38.615664845173, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI239049447, Length=549, Percent_Identity=38.615664845173, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI4505145, Length=560, Percent_Identity=36.25, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI270265879, Length=465, Percent_Identity=37.8494623655914, Blast_Score=327, Evalue=2e-89, Organism=Escherichia coli, GI87081919, Length=562, Percent_Identity=43.4163701067616, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1788806, Length=375, Percent_Identity=25.8666666666667, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17537199, Length=552, Percent_Identity=38.9492753623188, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322823, Length=572, Percent_Identity=39.6853146853147, Blast_Score=416, Evalue=1e-117, Organism=Drosophila melanogaster, GI281362674, Length=527, Percent_Identity=39.8481973434535, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI281362672, Length=527, Percent_Identity=39.8481973434535, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI21356279, Length=527, Percent_Identity=39.8481973434535, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI24646388, Length=532, Percent_Identity=38.7218045112782, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI24646386, Length=532, Percent_Identity=38.7218045112782, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI78707242, Length=540, Percent_Identity=34.2592592592593, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI78707238, Length=540, Percent_Identity=34.2592592592593, Blast_Score=333, Evalue=3e-91, Organism=Drosophila melanogaster, GI78707240, Length=527, Percent_Identity=34.7248576850095, Blast_Score=330, Evalue=2e-90, Organism=Drosophila melanogaster, GI78707232, Length=510, Percent_Identity=33.921568627451, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI281363505, Length=507, Percent_Identity=33.9250493096647, Blast_Score=312, Evalue=5e-85, Organism=Drosophila melanogaster, GI78707236, Length=507, Percent_Identity=33.9250493096647, Blast_Score=312, Evalue=5e-85, Organism=Drosophila melanogaster, GI281363503, Length=503, Percent_Identity=33.7972166998012, Blast_Score=308, Evalue=5e-84, Organism=Drosophila melanogaster, GI19922384, Length=522, Percent_Identity=28.9272030651341, Blast_Score=239, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 64398; Mature: 64267
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAPRVSRYYDVKRDENGHRYLDVNVTGFSLLHIPLLNKSTGFTREERRALGIEGLVPP CCCCCCCCHHEECCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCC HHSTLEEQKQRTYLRYLQQTTDLDKHEFLRALQDRNEVLFYALFADHLEEMLPILYTPTV CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHEEECCCH GEAVRVFSHIYRYPRGFAVSTEDIDRVDELLENVPLNDVRMIVATDSSAILGIGDQGFGG HHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCC MAISIGKLSLYTVAGGVGPDKTLPVELDVGTDRQDLIDDPLYLGVHHRRLTGRDYDEFLD EEEEECCEEEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCEECCCHHCCCCCCHHHHHH RFVEATVARYPKAIIQWEDFARGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLISASRL HHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KGERLQDQTFVVVGAGAGGIGVALAIRQGLMREGLSYAEANARVFVVDRYGLLMHGQPGL CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCCEEEECCCCC EEHQLSFARSPEDVAGWSCEGEWPSLHETVVRSGATALLGLTGVPGLFRQPTVEAMLAHT HHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHC SRPIVFPLSNPTSNVEAQPADLLRWTNGAAIIATGSPFPDIEYGGQMYSIGQGNNAFIFP CCCEEEECCCCCCCCCCCCHHHHEECCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEC GLGFGAVISRAREITDGMVMEAAQTLADETVGYGNRVYPPISAIRELSLKVAVRVARQAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KEGVCAERRIRNLTDDELEAFVRGRQWVPKYLPLRKAAGARD HHCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCHHHHCCCCC >Mature Secondary Structure PEAPRVSRYYDVKRDENGHRYLDVNVTGFSLLHIPLLNKSTGFTREERRALGIEGLVPP CCCCCCCHHEECCCCCCCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCC HHSTLEEQKQRTYLRYLQQTTDLDKHEFLRALQDRNEVLFYALFADHLEEMLPILYTPTV CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHEEECCCH GEAVRVFSHIYRYPRGFAVSTEDIDRVDELLENVPLNDVRMIVATDSSAILGIGDQGFGG HHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCC MAISIGKLSLYTVAGGVGPDKTLPVELDVGTDRQDLIDDPLYLGVHHRRLTGRDYDEFLD EEEEECCEEEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCEECCCHHCCCCCCHHHHHH RFVEATVARYPKAIIQWEDFARGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLISASRL HHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH KGERLQDQTFVVVGAGAGGIGVALAIRQGLMREGLSYAEANARVFVVDRYGLLMHGQPGL CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCCEEEECCCCC EEHQLSFARSPEDVAGWSCEGEWPSLHETVVRSGATALLGLTGVPGLFRQPTVEAMLAHT HHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHC SRPIVFPLSNPTSNVEAQPADLLRWTNGAAIIATGSPFPDIEYGGQMYSIGQGNNAFIFP CCCEEEECCCCCCCCCCCCHHHHEECCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEEC GLGFGAVISRAREITDGMVMEAAQTLADETVGYGNRVYPPISAIRELSLKVAVRVARQAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KEGVCAERRIRNLTDDELEAFVRGRQWVPKYLPLRKAAGARD HHCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA