| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94986163
Identifier: 94986163
GI number: 94986163
Start: 2170158
End: 2170652
Strand: Reverse
Name: 94986163
Synonym: Dgeo_2064
Alternate gene names: NA
Gene position: 2170652-2170158 (Counterclockwise)
Preceding gene: 94986164
Following gene: 94986162
Centisome position: 87.98
GC content: 68.89
Gene sequence:
>495_bases GTGCATCTGGACGGCACCCTGTTGAAGAAGCGCGAGGAGGAAGGGGCGTACTGGCTGGCTCATCCGGACAAGAACCCGCT CGCGATCCGCGCCGACTTCGTGGGGGGCGAGCTGACGCTCGAGAACGAGCTGTGCGTCTACATCCAGGATGCCCGCTACG CCGACGGCCTGCCCCACTCCGGCCTGATCGTCACCAAGCGCCCCTGCCCGACCGTGTTCGACCTCACCCCGCAGGAGGTC GCCGCGACCCACGCCCTGCTCGCGGAAGTGAAGGCGCACCTCGACGCTGCCGTGCAGCCGGACGGGTACACGGTGGGCTG GAATGTCTACCCGGCGGGCGGGCAGCACATCCCGCATGTTCACCTGCACGTCATTCCCCGCTGGAATACGGACGCGGCGG CGGGCGCAGGGCTGCGGTTCTTCCTCAAAGAAGCCGCGCGGGAAGCGGAGCGACGATGGAGGCCCGAGGTGTCCGCTCTT CCCGACCCCGCCTGA
Upstream 100 bases:
>100_bases AGGAGAGTGTGAAATCTCGCCGGAGTTACGGGGGCACCGCGCCGGAGCGCGTGCGTGAACAGGTCGCGGCAGCAAAGGCG GCGCTCTCGTGAAGGTGACC
Downstream 100 bases:
>100_bases ACCCCGCTTCATGAAGGAGGCCCCGACATGACCCTCACCCCAGTGTCCATCAACACCATGCACGTCAAGCTGCGGCAGGC CGCGCCCGCCGACTTTCCCC
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Cell-Cycle Regulation Histidine Triad Protein; Protein Hit; Helicase-Related Protein; Cell-Cycle Regulation Histidine Triad HIT Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL PDPA
Sequences:
>Translated_164_residues MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL PDPA >Mature_164_residues MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHSGLIVTKRPCPTVFDLTPQEV AATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHVHLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSAL PDPA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18097; Mature: 18097
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHS CCCCCHHHHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCC GLIVTKRPCPTVFDLTPQEVAATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHV CEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCEE HLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSALPDPA EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHLDGTLLKKREEEGAYWLAHPDKNPLAIRADFVGGELTLENELCVYIQDARYADGLPHS CCCCCHHHHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCCC GLIVTKRPCPTVFDLTPQEVAATHALLAEVKAHLDAAVQPDGYTVGWNVYPAGGQHIPHV CEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEEEECCCCCCCCEE HLHVIPRWNTDAAAGAGLRFFLKEAAREAERRWRPEVSALPDPA EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA