Click here to switch to the map view.

The map label for this gene is 94986133

Identifier: 94986133

GI number: 94986133

Start: 2141965

End: 2142678

Strand: Reverse

Name: 94986133

Synonym: Dgeo_2034

Alternate gene names: NA

Gene position: 2142678-2141965 (Counterclockwise)

Preceding gene: 94986134

Following gene: 94986132

Centisome position: 86.85

GC content: 66.39

Gene sequence:

>714_bases
ATGACTGCCGCCTCCCCCCTCCCTTTCGCCAGTGGCCCGGTGCTGGCTGGACAGGTCATCGCAGTGACCGGCGCGGACCA
GGGGTATGGCCGAGCGATCAGCGGCGCGCTGGCGCGAGCGGGTGCCAGTGTGGTCCTGGTCGGCGGGAACAGCGAGTCGC
TGGCTGTCGCTGCCAGCAGCCTAGAACTGGCGGGCGGCACGGCCATTCCCATCAAAGCCGATGTGGGTGTCCCACTGGAC
TGGCTCAGTGCACAAAACCGCATTTTGGAAATTTTCGGCGCATTGCACGGCATCGTGCATCTGGCGGACAAGCGGGCGCA
CACCAACTTCACCTTGCTCAGTGAGAACGAGTGGATGGAGCTGTTTAACTGCAATGTGAAGAGCAGTGTCGCCATCGCGC
AGATCGTGCGCCGGCGCCTCACCGGCACCTGGCTGACCCTGGTTGGGCCGCACCTCGACGAGGTGGGCCTCCAGGTGCAT
CCCCAGCGCGGCGCGCTGCGCGGGCTGGTTGAACATGCCCATGACGAGGACCTGCGCGTGAATCTGGTGCTGCCTTCTCG
GGCGAGCAGCGGCGACGAGGCGCTGGACCGTCCACTGGCCGACGCGGTGTTGGCTCTCGCCACGCCTGCCCTTGCGCACC
TGCGCGGCAACGTGCTGGAGGTGCCGCTGCCGCCCGTTCCGAAGCTGCGTTCTCAGGAAGTGAACAGTCGGTGA

Upstream 100 bases:

>100_bases
CGCGCGGGCGAGCTGCCGCCAGGTGCCTTGCGCCCCCTGCCCGAGGCGAGTTGAGGCCGCGCGCTCCTGCCCCGGCCGAT
AGGGACGCTATGCTGAGGGT

Downstream 100 bases:

>100_bases
AATGCGTTCTCCTCCATGCCGAACGTTCTGGGCAGTGCCCCCGCGTGAAAGCGCGGACAAGCTCGCCATTCCAGGGCTGG
TTGGGGCCGCGCAGAGGGCG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Oxidoreductase; Short-Chain Dehydrogenase/Reductase Sdr

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTAASPLPFASGPVLAGQVIAVTGADQGYGRAISGALARAGASVVLVGGNSESLAVAASSLELAGGTAIPIKADVGVPLD
WLSAQNRILEIFGALHGIVHLADKRAHTNFTLLSENEWMELFNCNVKSSVAIAQIVRRRLTGTWLTLVGPHLDEVGLQVH
PQRGALRGLVEHAHDEDLRVNLVLPSRASSGDEALDRPLADAVLALATPALAHLRGNVLEVPLPPVPKLRSQEVNSR

Sequences:

>Translated_237_residues
MTAASPLPFASGPVLAGQVIAVTGADQGYGRAISGALARAGASVVLVGGNSESLAVAASSLELAGGTAIPIKADVGVPLD
WLSAQNRILEIFGALHGIVHLADKRAHTNFTLLSENEWMELFNCNVKSSVAIAQIVRRRLTGTWLTLVGPHLDEVGLQVH
PQRGALRGLVEHAHDEDLRVNLVLPSRASSGDEALDRPLADAVLALATPALAHLRGNVLEVPLPPVPKLRSQEVNSR
>Mature_236_residues
TAASPLPFASGPVLAGQVIAVTGADQGYGRAISGALARAGASVVLVGGNSESLAVAASSLELAGGTAIPIKADVGVPLDW
LSAQNRILEIFGALHGIVHLADKRAHTNFTLLSENEWMELFNCNVKSSVAIAQIVRRRLTGTWLTLVGPHLDEVGLQVHP
QRGALRGLVEHAHDEDLRVNLVLPSRASSGDEALDRPLADAVLALATPALAHLRGNVLEVPLPPVPKLRSQEVNSR

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24810; Mature: 24679

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASPLPFASGPVLAGQVIAVTGADQGYGRAISGALARAGASVVLVGGNSESLAVAASS
CCCCCCCCCCCCCEEECEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEE
LELAGGTAIPIKADVGVPLDWLSAQNRILEIFGALHGIVHLADKRAHTNFTLLSENEWME
EEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
LFNCNVKSSVAIAQIVRRRLTGTWLTLVGPHLDEVGLQVHPQRGALRGLVEHAHDEDLRV
HHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCEECCCHHHHHHHHHHCCCCCEEE
NLVLPSRASSGDEALDRPLADAVLALATPALAHLRGNVLEVPLPPVPKLRSQEVNSR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAASPLPFASGPVLAGQVIAVTGADQGYGRAISGALARAGASVVLVGGNSESLAVAASS
CCCCCCCCCCCCEEECEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEE
LELAGGTAIPIKADVGVPLDWLSAQNRILEIFGALHGIVHLADKRAHTNFTLLSENEWME
EEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
LFNCNVKSSVAIAQIVRRRLTGTWLTLVGPHLDEVGLQVHPQRGALRGLVEHAHDEDLRV
HHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCEECCCHHHHHHHHHHCCCCCEEE
NLVLPSRASSGDEALDRPLADAVLALATPALAHLRGNVLEVPLPPVPKLRSQEVNSR
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA