| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is apaG [H]
Identifier: 94986092
GI number: 94986092
Start: 2095686
End: 2096078
Strand: Reverse
Name: apaG [H]
Synonym: Dgeo_1993
Alternate gene names: 94986092
Gene position: 2096078-2095686 (Counterclockwise)
Preceding gene: 94986095
Following gene: 94986090
Centisome position: 84.96
GC content: 67.18
Gene sequence:
>393_bases ATGAGCCAAGCGACCGACACCCCCTCACCGGACGTGCGCGTGAGCGTGGACGTCTCCTATCTGCCCGCCCACTCCACCCC GGAGCGCCGCGTTTTTGCCTACGTCATCCGCATCGAAAACTGCAGCGATCAAACCTGGCAACTCCTGGCGCGGCACTGGG ACATCCTCGACGCCGGGGGCCGCGAGACTGTTGTGGATGGCGAGGGTGTGGTGGGCGAGCAGCCGGTGATCCCGCCCGGC GGGGCCTTCGTCTACAACTCCTTCGTGACGCTGGAGGACACCCCGGGACGGATGCAGGGCTACTACGTGATGCAGGACGC CTGGGGATTGCGGGCGCGAGTGCCGATTCCACCGTTCCGGCTGGAGGTGCCGGGGGAGCGGATGTGGCACTGA
Upstream 100 bases:
>100_bases CCGCTGCGCGCAGCAGGGCGAACAGGAACTCCTGATTGATGATTGGGTTGGGTTGAGCCGTCACAGGGCCAAGTCTACGC CGCGCGGCTATGCTCCCCAC
Downstream 100 bases:
>100_bases GAGATGAGGCCTGAGGGCGCTTCGGCTCTGGTTTTGGCCCACTCACCCCTGCTCCCTTCCTACGCCTGCGGCACCTCTGC CTCCACCAATGTTCCGTGAC
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSQATDTPSPDVRVSVDVSYLPAHSTPERRVFAYVIRIENCSDQTWQLLARHWDILDAGGRETVVDGEGVVGEQPVIPPG GAFVYNSFVTLEDTPGRMQGYYVMQDAWGLRARVPIPPFRLEVPGERMWH
Sequences:
>Translated_130_residues MSQATDTPSPDVRVSVDVSYLPAHSTPERRVFAYVIRIENCSDQTWQLLARHWDILDAGGRETVVDGEGVVGEQPVIPPG GAFVYNSFVTLEDTPGRMQGYYVMQDAWGLRARVPIPPFRLEVPGERMWH >Mature_129_residues SQATDTPSPDVRVSVDVSYLPAHSTPERRVFAYVIRIENCSDQTWQLLARHWDILDAGGRETVVDGEGVVGEQPVIPPGG AFVYNSFVTLEDTPGRMQGYYVMQDAWGLRARVPIPPFRLEVPGERMWH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812188, Length=126, Percent_Identity=38.8888888888889, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI15812186, Length=126, Percent_Identity=38.8888888888889, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI7661672, Length=125, Percent_Identity=34.4, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1786235, Length=118, Percent_Identity=47.4576271186441, Blast_Score=99, Evalue=1e-22, Organism=Drosophila melanogaster, GI21356905, Length=125, Percent_Identity=36, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644238, Length=125, Percent_Identity=36, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 14614; Mature: 14482
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQATDTPSPDVRVSVDVSYLPAHSTPERRVFAYVIRIENCSDQTWQLLARHWDILDAGG CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCEECCCC RETVVDGEGVVGEQPVIPPGGAFVYNSFVTLEDTPGRMQGYYVMQDAWGLRARVPIPPFR CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCCEE LEVPGERMWH EECCCHHCCC >Mature Secondary Structure SQATDTPSPDVRVSVDVSYLPAHSTPERRVFAYVIRIENCSDQTWQLLARHWDILDAGG CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCEECCCC RETVVDGEGVVGEQPVIPPGGAFVYNSFVTLEDTPGRMQGYYVMQDAWGLRARVPIPPFR CEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCEEECCCCCEE LEVPGERMWH EECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]