| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986067
Identifier: 94986067
GI number: 94986067
Start: 2069916
End: 2071301
Strand: Reverse
Name: 94986067
Synonym: Dgeo_1968
Alternate gene names: NA
Gene position: 2071301-2069916 (Counterclockwise)
Preceding gene: 94986068
Following gene: 94986061
Centisome position: 83.95
GC content: 67.75
Gene sequence:
>1386_bases ATGTCTTCACCCGGCTCATTCGAGGCTCAGAGGGGCGGCTGGCGAACGTTCCTGGCCCTGTGGGGATCGCAGTCGGTCAG CCAGGTTGGCAGTTATGTCTCGTGGTTTGCACTGAATGTGTACGTTGCGCAGACGCTCTTTCCCCGTCCTGACCAAAAGG CGCCGCTGGCGCTGGCCCTGGGGGCCTTTGCGATTGCCGCCACTTTGCTGGCAGTGGTGCTCGCGCCGGTCGCTGGGTCG GTGGCCGACCGCACCCACCGCAAGCGCGTCATGCTGGTCTGCGACCTGCTGAGCGGCCTCCTGACCACCCTGCTGGCAGC GCTGATGTTCTGGACCGTGGTGCCTTTCTGGCTCCTGCTCGCCTTCGTGATCGTCACGCAGGCGCTGAGCTTCTTTCATG AGGCCGCGTTGGAAAGCAGCTACGCCATGATCGTGCCCGAGGAGCAGCTCACGCGCGCCAACGGCATGATGCAGACCACC CGGCAGTTCAGCAGCCTGATTGCGCCCACGATCGCCACCCTGCTGATCGGCGTGCCCACCCTGCTGCACGGCAGCGGCTG GCTGGCCTCGTTGCGGGATGGCGTGCCTTTCGCGCTGCTGGTGGACGGCGTGAGCTTCCTGCTGGCCGCGCTCGTTCTTG CCTGGCTCGCTATTCCTAGCCCGCCCCCCGCCGAGGATCATGGGGGTGCCGCCGCCAACCTCAAGGCCGATACGCGCCTG GGCTGGACCTACCTGCTGCGCCGCCCGCCCCTGCTGCAACTCCTGATCGGGTCGGCCGTCTTGAACTTTGCCATGGCCGC GATTCCGGTGTACCAGACCCTGATCACCACCTTCACCTTGCAGCAAGACCGCGTTGCCCGGGGCCTGAGCTTTCCAACTG CTCTTGCCATCATCGACACCGCGACGGGCGTGGGCATGTTCCTGGGGGGGCTCGCCATCAGCACCTGGGGTGGGCTGAGG CGGCGCCGGGTGCTGGGTGTCCTGGTGCCCGCCCTGGTGTCAGGGGCAGGCCTGGTCCTGATGGGCCTTTCGGGCGACGT GTACCTGACCGCCGCCGCCTTCACCCTGACCGTCTTTGTGATGCCGATCTCGCAGGCGCACAGCGCGGGCATTTGGCAGG CGCAGGTGCCGCGCGAACTCCAGGGGCGCGTGTTCGCGGTGCGCCGCATCGTGAGCCGCTTCACCGTGCCGCTGGGCATG GCCTTTGTCAGCGGCGTGTCCACCGCCCTGCCTCCCGGCCCCGTGATCGCCACGCTGGGCCTGCTGGTGATCATCGTCGG CACGGCGCAGCTGCTGAACCCCACCGTGCAGCGGGTGGACGACAAGGACTACGTGGAGGGGCTGGCGGCAGCGCGGGGCG AGGCTTCCGTGGTGAGTGGGCAGTAG
Upstream 100 bases:
>100_bases CCCCAGCCAAAGGCGGGTCCAGCACAGTTTTTCCTGCTCAGCAGCCGGGCTGCTGCGCTTTTCCCGTTCCATCACACCAC GGCGTTTAGACTGCGCCATC
Downstream 100 bases:
>100_bases GTCCAGGAGGAGTAGGCCGCGAGAAAAGAGCGGGCGGGAGGCTTGAGCCTCTGCCCGCTGACACGGGCGACGGGGTCAGC GGTTCCCCCACTGATCACGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Amino Acid Adenylation Domain-Containing Protein; Facilitator Family Transporter; Macrolide Efflux Protein
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSSPGSFEAQRGGWRTFLALWGSQSVSQVGSYVSWFALNVYVAQTLFPRPDQKAPLALALGAFAIAATLLAVVLAPVAGS VADRTHRKRVMLVCDLLSGLLTTLLAALMFWTVVPFWLLLAFVIVTQALSFFHEAALESSYAMIVPEEQLTRANGMMQTT RQFSSLIAPTIATLLIGVPTLLHGSGWLASLRDGVPFALLVDGVSFLLAALVLAWLAIPSPPPAEDHGGAAANLKADTRL GWTYLLRRPPLLQLLIGSAVLNFAMAAIPVYQTLITTFTLQQDRVARGLSFPTALAIIDTATGVGMFLGGLAISTWGGLR RRRVLGVLVPALVSGAGLVLMGLSGDVYLTAAAFTLTVFVMPISQAHSAGIWQAQVPRELQGRVFAVRRIVSRFTVPLGM AFVSGVSTALPPGPVIATLGLLVIIVGTAQLLNPTVQRVDDKDYVEGLAAARGEASVVSGQ
Sequences:
>Translated_461_residues MSSPGSFEAQRGGWRTFLALWGSQSVSQVGSYVSWFALNVYVAQTLFPRPDQKAPLALALGAFAIAATLLAVVLAPVAGS VADRTHRKRVMLVCDLLSGLLTTLLAALMFWTVVPFWLLLAFVIVTQALSFFHEAALESSYAMIVPEEQLTRANGMMQTT RQFSSLIAPTIATLLIGVPTLLHGSGWLASLRDGVPFALLVDGVSFLLAALVLAWLAIPSPPPAEDHGGAAANLKADTRL GWTYLLRRPPLLQLLIGSAVLNFAMAAIPVYQTLITTFTLQQDRVARGLSFPTALAIIDTATGVGMFLGGLAISTWGGLR RRRVLGVLVPALVSGAGLVLMGLSGDVYLTAAAFTLTVFVMPISQAHSAGIWQAQVPRELQGRVFAVRRIVSRFTVPLGM AFVSGVSTALPPGPVIATLGLLVIIVGTAQLLNPTVQRVDDKDYVEGLAAARGEASVVSGQ >Mature_460_residues SSPGSFEAQRGGWRTFLALWGSQSVSQVGSYVSWFALNVYVAQTLFPRPDQKAPLALALGAFAIAATLLAVVLAPVAGSV ADRTHRKRVMLVCDLLSGLLTTLLAALMFWTVVPFWLLLAFVIVTQALSFFHEAALESSYAMIVPEEQLTRANGMMQTTR QFSSLIAPTIATLLIGVPTLLHGSGWLASLRDGVPFALLVDGVSFLLAALVLAWLAIPSPPPAEDHGGAAANLKADTRLG WTYLLRRPPLLQLLIGSAVLNFAMAAIPVYQTLITTFTLQQDRVARGLSFPTALAIIDTATGVGMFLGGLAISTWGGLRR RRVLGVLVPALVSGAGLVLMGLSGDVYLTAAAFTLTVFVMPISQAHSAGIWQAQVPRELQGRVFAVRRIVSRFTVPLGMA FVSGVSTALPPGPVIATLGLLVIIVGTAQLLNPTVQRVDDKDYVEGLAAARGEASVVSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48793; Mature: 48662
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPGSFEAQRGGWRTFLALWGSQSVSQVGSYVSWFALNVYVAQTLFPRPDQKAPLALAL CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GAFAIAATLLAVVLAPVAGSVADRTHRKRVMLVCDLLSGLLTTLLAALMFWTVVPFWLLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVIVTQALSFFHEAALESSYAMIVPEEQLTRANGMMQTTRQFSSLIAPTIATLLIGVPT HHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHGSGWLASLRDGVPFALLVDGVSFLLAALVLAWLAIPSPPPAEDHGGAAANLKADTRL HHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GWTYLLRRPPLLQLLIGSAVLNFAMAAIPVYQTLITTFTLQQDRVARGLSFPTALAIIDT CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH ATGVGMFLGGLAISTWGGLRRRRVLGVLVPALVSGAGLVLMGLSGDVYLTAAAFTLTVFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHH MPISQAHSAGIWQAQVPRELQGRVFAVRRIVSRFTVPLGMAFVSGVSTALPPGPVIATLG HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLVIIVGTAQLLNPTVQRVDDKDYVEGLAAARGEASVVSGQ HHHHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSPGSFEAQRGGWRTFLALWGSQSVSQVGSYVSWFALNVYVAQTLFPRPDQKAPLALAL CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GAFAIAATLLAVVLAPVAGSVADRTHRKRVMLVCDLLSGLLTTLLAALMFWTVVPFWLLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVIVTQALSFFHEAALESSYAMIVPEEQLTRANGMMQTTRQFSSLIAPTIATLLIGVPT HHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHGSGWLASLRDGVPFALLVDGVSFLLAALVLAWLAIPSPPPAEDHGGAAANLKADTRL HHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GWTYLLRRPPLLQLLIGSAVLNFAMAAIPVYQTLITTFTLQQDRVARGLSFPTALAIIDT CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH ATGVGMFLGGLAISTWGGLRRRRVLGVLVPALVSGAGLVLMGLSGDVYLTAAAFTLTVFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHH MPISQAHSAGIWQAQVPRELQGRVFAVRRIVSRFTVPLGMAFVSGVSTALPPGPVIATLG HHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLVIIVGTAQLLNPTVQRVDDKDYVEGLAAARGEASVVSGQ HHHHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA