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The map label for this gene is ygaZ [C]

Identifier: 94986054

GI number: 94986054

Start: 2060304

End: 2061032

Strand: Reverse

Name: ygaZ [C]

Synonym: Dgeo_1955

Alternate gene names: 94986054

Gene position: 2061032-2060304 (Counterclockwise)

Preceding gene: 94986057

Following gene: 94986053

Centisome position: 83.54

GC content: 69.55

Gene sequence:

>729_bases
ATGGCCTGCTCTGCCTCCCCGTCTGGGAAAGTCGCTGTTTCCTTCTGGCCCGCGTTTTGGCGTGGCTTTCGGGCGCTGAT
GCCGCTGTGGCTGGGTCTGGTCCCCTTTGCGGTGGCCTACGCCGTCACCGCGCGGGCGGCAGGACTAGGCATCGGGGAAA
CACAACTGATGAGCCTAACGGTCTTTGCGGGGGCGAGCCAGTTTGCGGCGGCGGGACTTTTTGCCAGCGGGACGTCCGCG
CTGGGCATCGTCGCCACCACCTTTTTGCTGAATGCCCGGCACGTGCTGTACGGCTTGAGTCTGGCGCGGCAGGTCCCGCT
CACCCGCCCGCAGCGGGTGCTGGCCGCGCAGTTCCTGACCGACGAAGCCTACGGCGTGGCGGTGGTGAACGGGGCCCGTG
TGCCGGGGAGCCTCTCCTTTGGCTTCCTGCTGGGAGCGGAACTTAGCCTGTACGCGGTCTGGAACGTCGCGACGTTCGGC
GGGGCACTGGCGGGGGGCGTGCTGCCGGACCCCGCTGCGTTGGGCGTGGGGGTCGTCTTCCCGCTGGCCTTCCTGGGGTT
GCTGGTGCCGCTGCTGGTTGATCGGCAGGCGTTGCTCGTGGCGTTTGCCTCGGGCGTGGGCGCTTGGGGTCTGTCGCGCG
TGCTGCCGGGCGGCCTGGTCGTGCTGCTTGCCGGAGTGGGTGGGGCGCTGCTGGGGGCCTGGCTGGTCACGCGCAAGGCG
GCAGCATGA

Upstream 100 bases:

>100_bases
GCCCCAGCTGGGTGGACGGCTCCGACTTGAAAGTAGTCTAGCGGGGCCTGTTCAGGCGAAAGTCAGCTTGTCTCACCTTC
GGGGCTAGACTGAGCGCCGC

Downstream 100 bases:

>100_bases
GTGCTCTGCCCGTCATCCTGCTGATGTGGGGCGTCACGTATCCGGTGCGGCTGCTGGGCCTGAGCCTGGGCCGCTTGCAG
CTGCCGCCTTTCTGGCTGGC

Product: AzlC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MACSASPSGKVAVSFWPAFWRGFRALMPLWLGLVPFAVAYAVTARAAGLGIGETQLMSLTVFAGASQFAAAGLFASGTSA
LGIVATTFLLNARHVLYGLSLARQVPLTRPQRVLAAQFLTDEAYGVAVVNGARVPGSLSFGFLLGAELSLYAVWNVATFG
GALAGGVLPDPAALGVGVVFPLAFLGLLVPLLVDRQALLVAFASGVGAWGLSRVLPGGLVVLLAGVGGALLGAWLVTRKA
AA

Sequences:

>Translated_242_residues
MACSASPSGKVAVSFWPAFWRGFRALMPLWLGLVPFAVAYAVTARAAGLGIGETQLMSLTVFAGASQFAAAGLFASGTSA
LGIVATTFLLNARHVLYGLSLARQVPLTRPQRVLAAQFLTDEAYGVAVVNGARVPGSLSFGFLLGAELSLYAVWNVATFG
GALAGGVLPDPAALGVGVVFPLAFLGLLVPLLVDRQALLVAFASGVGAWGLSRVLPGGLVVLLAGVGGALLGAWLVTRKA
AA
>Mature_241_residues
ACSASPSGKVAVSFWPAFWRGFRALMPLWLGLVPFAVAYAVTARAAGLGIGETQLMSLTVFAGASQFAAAGLFASGTSAL
GIVATTFLLNARHVLYGLSLARQVPLTRPQRVLAAQFLTDEAYGVAVVNGARVPGSLSFGFLLGAELSLYAVWNVATFGG
ALAGGVLPDPAALGVGVVFPLAFLGLLVPLLVDRQALLVAFASGVGAWGLSRVLPGGLVVLLAGVGGALLGAWLVTRKAA
A

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=187, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 24537; Mature: 24406

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACSASPSGKVAVSFWPAFWRGFRALMPLWLGLVPFAVAYAVTARAAGLGIGETQLMSLT
CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEE
VFAGASQFAAAGLFASGTSALGIVATTFLLNARHVLYGLSLARQVPLTRPQRVLAAQFLT
EECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEAYGVAVVNGARVPGSLSFGFLLGAELSLYAVWNVATFGGALAGGVLPDPAALGVGVVF
CCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
PLAFLGLLVPLLVDRQALLVAFASGVGAWGLSRVLPGGLVVLLAGVGGALLGAWLVTRKA
HHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
AA
CC
>Mature Secondary Structure 
ACSASPSGKVAVSFWPAFWRGFRALMPLWLGLVPFAVAYAVTARAAGLGIGETQLMSLT
CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEE
VFAGASQFAAAGLFASGTSALGIVATTFLLNARHVLYGLSLARQVPLTRPQRVLAAQFLT
EECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEAYGVAVVNGARVPGSLSFGFLLGAELSLYAVWNVATFGGALAGGVLPDPAALGVGVVF
CCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
PLAFLGLLVPLLVDRQALLVAFASGVGAWGLSRVLPGGLVVLLAGVGGALLGAWLVTRKA
HHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]