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The map label for this gene is yecS [H]

Identifier: 94986057

GI number: 94986057

Start: 2062029

End: 2062724

Strand: Reverse

Name: yecS [H]

Synonym: Dgeo_1958

Alternate gene names: 94986057

Gene position: 2062724-2062029 (Counterclockwise)

Preceding gene: 94986058

Following gene: 94986054

Centisome position: 83.61

GC content: 66.95

Gene sequence:

>696_bases
ATGTCCGATCTGCTGACGGGTTTTCGCACCATCCTGACCGGCGAGTACGTGGCGCTGCTGCTCTCCGGGTTGCGCCTCAC
GCTCGCCGTGAGTCTGTGCGCGCTGGGGGTGTCGGTGATGGTGGGGACGCTGCTTGGGGTGGCACGGGTGTTTCGTATGC
CGCTGCTGGGGTGGCTCGGCAACATCTACGTCGAGGTGGTGCGCGGCATCCCACTGATCGTGCTCCTGAGCGTGGTGTAC
TACGGCTTGCCTGCGCTTGGCCTCACCCTGGCGAGTTTCCCGGCGGCGGTGTTGGCGCTGGGCCTGTACTCGGCGGCGTA
TACCAGTGAGATCGTGCGCGGAGGGCTAGGCAGCGTACCGATTGGGCAGATCGAGGCGGCGCGGAGCCTGGGCCTCAGCC
GCGCCGGGGCGCTGCGGTATGTGGTGCTGCCGCAGGCGTGGCGGGTGGCGCTGCCCGCCCTCGGCAACGAGTTCATCAGC
CTGATTCTGGGCAGCAGCCTTGCCAGTGCCGTCACCCTGCAAGAACTCTTTGCGCAGGGCAAGTACATCACCGGCGTCAC
CTACCGCCAGTTCGAGGTGTACGCCGTGCTGGCGCTGATCTACTTTCTGCTCACCTTCATCCTGACCCGGCTGGTGCGCC
TGCTCGAGCGCCGCCTTGGCCGGGGTGAGACGCTGGGGACGCGGCGGGTGATTTAG

Upstream 100 bases:

>100_bases
ACCAGAAGCTGCTGAACAAGTGGATTGTGCAGAAATAAACGCCCGTGGGCGAGAAGGCCGAACGGTCGAGCCCTGGACAC
TGCCCGTACACTGATCCGTC

Downstream 100 bases:

>100_bases
GTGCTGTCAGCCGTCAGGACTGGCTCCCTTCCGCCAGATGCAGCACCGCCACGCTGCCCAGAATCAGGGCCAGCCCCAGC
CAGGCGCGCGGGGTGAAGCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSDLLTGFRTILTGEYVALLLSGLRLTLAVSLCALGVSVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVY
YGLPALGLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFIS
LILGSSLASAVTLQELFAQGKYITGVTYRQFEVYAVLALIYFLLTFILTRLVRLLERRLGRGETLGTRRVI

Sequences:

>Translated_231_residues
MSDLLTGFRTILTGEYVALLLSGLRLTLAVSLCALGVSVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVY
YGLPALGLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFIS
LILGSSLASAVTLQELFAQGKYITGVTYRQFEVYAVLALIYFLLTFILTRLVRLLERRLGRGETLGTRRVI
>Mature_230_residues
SDLLTGFRTILTGEYVALLLSGLRLTLAVSLCALGVSVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVYY
GLPALGLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFISL
ILGSSLASAVTLQELFAQGKYITGVTYRQFEVYAVLALIYFLLTFILTRLVRLLERRLGRGETLGTRRVI

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=37.799043062201, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=37.3205741626794, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=31.7972350230415, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=31.140350877193, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=34.841628959276, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=30.6976744186047, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=31.8840579710145, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=34.5971563981043, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=26.605504587156, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI48994930, Length=166, Percent_Identity=33.1325301204819, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24789; Mature: 24658

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLLTGFRTILTGEYVALLLSGLRLTLAVSLCALGVSVMVGTLLGVARVFRMPLLGWLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIYVEVVRGIPLIVLLSVVYYGLPALGLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFISLILGSSLASAVTLQELFAQG
CHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KYITGVTYRQFEVYAVLALIYFLLTFILTRLVRLLERRLGRGETLGTRRVI
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SDLLTGFRTILTGEYVALLLSGLRLTLAVSLCALGVSVMVGTLLGVARVFRMPLLGWLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIYVEVVRGIPLIVLLSVVYYGLPALGLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFISLILGSSLASAVTLQELFAQG
CHHHHHHHHHCCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KYITGVTYRQFEVYAVLALIYFLLTFILTRLVRLLERRLGRGETLGTRRVI
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]