| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is cutM [H]
Identifier: 94986045
GI number: 94986045
Start: 2048035
End: 2048826
Strand: Reverse
Name: cutM [H]
Synonym: Dgeo_1946
Alternate gene names: 94986045
Gene position: 2048826-2048035 (Counterclockwise)
Preceding gene: 94986046
Following gene: 94986043
Centisome position: 83.04
GC content: 67.17
Gene sequence:
>792_bases ATGTACCCAGCCCAGTTCGACTATCAGAAAGCCGCCACTGTCGATGAGGCCCTGGCCTTGATGGCGGCCAATCCGGACCT CAAGGTGATTGCGGGGGGCCACTCGCTGCTGCCGGCCATGAAGCTGCGGCTGGCGCAACCGCCCGCACTGCTCGATATCT GGGGCATCGCGGAACTCAAGGGCATTCGGCGTGAGGGAGATCATTTCGTGGTGGGGGCGATGACCACCCATGCGGATGTG TTGCGTTCCGAATTGCCGCTCTTTCCCGAGGTGGCCTCCGAGGTCGGAGACCCGATGGTCCGCAACCGAGGCACCATCGG CGGTTCTCTCGCCCACGCGGACCCCAGCGCCGACTACCCGGCGGCGGCGCTGGCCCTCGGTGTCGAGTTCGTGATACGTG GCCCCGAGGGCGAGCGGGTTGTGCCCGCCGATGAGATGTTCCTGGGCATGTTCGAGAGCGCGGTGCAGCCCGGCGAACTC CTGACCCACATTCGCATTCCGGCCAGGGTGCAGGGGGGTGCCTACGAGAAGTTCAAGCACCCAGCCAGTCACTACGCGAT TGTGGGGGTGGCTGTCGTCCGGGATGCCAGCGGTCAGATTCGCGCCGCCTACACCGGGGCGGGCGAGAAGGCCGAGCGGC TGCAGAGGCTGGAAGAGCGCCTGAACAGTGGCCAGCCGGTCGGCACCGGCCTGGTGGATCCGGCGGGCCTGCTGGGTGAC CGCTTTGCCAGCCCCGAGTACCGCGCGCATCTGGTGGACGTGTTGGCCGCCAGAGCAGCAGCACGGGTGTAG
Upstream 100 bases:
>100_bases TCGACATGCCCTACACCAGCGAGAAGGTCTGGCGCGCCATCCGTGAGGCGCGCGGCGGCCTGGGGCAGGCGGCAGACGAC TGAGAGATCCCGGAGGAAAC
Downstream 100 bases:
>100_bases GGAGGACGGCGGAAAAGAAGGCGGAACAGAAAAGAAGGTGGGTCAGCCCACCTTCTGCTTGGTCCTCTGGGTTGCCCGAT CGGCCCTTACTCGTGCTCGT
Product: molybdopterin dehydrogenase, FAD-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MYPAQFDYQKAATVDEALALMAANPDLKVIAGGHSLLPAMKLRLAQPPALLDIWGIAELKGIRREGDHFVVGAMTTHADV LRSELPLFPEVASEVGDPMVRNRGTIGGSLAHADPSADYPAAALALGVEFVIRGPEGERVVPADEMFLGMFESAVQPGEL LTHIRIPARVQGGAYEKFKHPASHYAIVGVAVVRDASGQIRAAYTGAGEKAERLQRLEERLNSGQPVGTGLVDPAGLLGD RFASPEYRAHLVDVLAARAAARV
Sequences:
>Translated_263_residues MYPAQFDYQKAATVDEALALMAANPDLKVIAGGHSLLPAMKLRLAQPPALLDIWGIAELKGIRREGDHFVVGAMTTHADV LRSELPLFPEVASEVGDPMVRNRGTIGGSLAHADPSADYPAAALALGVEFVIRGPEGERVVPADEMFLGMFESAVQPGEL LTHIRIPARVQGGAYEKFKHPASHYAIVGVAVVRDASGQIRAAYTGAGEKAERLQRLEERLNSGQPVGTGLVDPAGLLGD RFASPEYRAHLVDVLAARAAARV >Mature_263_residues MYPAQFDYQKAATVDEALALMAANPDLKVIAGGHSLLPAMKLRLAQPPALLDIWGIAELKGIRREGDHFVVGAMTTHADV LRSELPLFPEVASEVGDPMVRNRGTIGGSLAHADPSADYPAAALALGVEFVIRGPEGERVVPADEMFLGMFESAVQPGEL LTHIRIPARVQGGAYEKFKHPASHYAIVGVAVVRDASGQIRAAYTGAGEKAERLQRLEERLNSGQPVGTGLVDPAGLLGD RFASPEYRAHLVDVLAARAAARV
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=272, Percent_Identity=25.3676470588235, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 27969; Mature: 27969
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPAQFDYQKAATVDEALALMAANPDLKVIAGGHSLLPAMKLRLAQPPALLDIWGIAELK CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEHHHHHHHH GIRREGDHFVVGAMTTHADVLRSELPLFPEVASEVGDPMVRNRGTIGGSLAHADPSADYP HHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCC AAALALGVEFVIRGPEGERVVPADEMFLGMFESAVQPGELLTHIRIPARVQGGAYEKFKH HHHHHHCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCHHHHHEECCCEECCCCHHHHCC PASHYAIVGVAVVRDASGQIRAAYTGAGEKAERLQRLEERLNSGQPVGTGLVDPAGLLGD CCHHHEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RFASPEYRAHLVDVLAARAAARV HCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYPAQFDYQKAATVDEALALMAANPDLKVIAGGHSLLPAMKLRLAQPPALLDIWGIAELK CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEHHHHHHHH GIRREGDHFVVGAMTTHADVLRSELPLFPEVASEVGDPMVRNRGTIGGSLAHADPSADYP HHHCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCC AAALALGVEFVIRGPEGERVVPADEMFLGMFESAVQPGELLTHIRIPARVQGGAYEKFKH HHHHHHCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCHHHHHEECCCEECCCCHHHHCC PASHYAIVGVAVVRDASGQIRAAYTGAGEKAERLQRLEERLNSGQPVGTGLVDPAGLLGD CCHHHEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RFASPEYRAHLVDVLAARAAARV HCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]