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The map label for this gene is secY [H]

Identifier: 94985947

GI number: 94985947

Start: 1955095

End: 1956420

Strand: Reverse

Name: secY [H]

Synonym: Dgeo_1847

Alternate gene names: 94985947

Gene position: 1956420-1955095 (Counterclockwise)

Preceding gene: 94985948

Following gene: 94985946

Centisome position: 79.3

GC content: 62.52

Gene sequence:

>1326_bases
ATGCTGCGTGCCTTCCGCGACGCGTTCCGCATTCCGGACCTTCGGCGGAAGATTGTCTTTACCCTGCTGCTCCTCGCCGT
GTTCCGCCTCGGTAGCGCCATTCCCACGCCGGGCGTGAATACCGACGCACTCCAAAGGGCCACCTCGGGTGGCCTCTTTG
GGTTGATCAGCCTGATCTCGGGCGGCAATCTTTCGCAGTTCTCGATCTTTGCGTTGGGCGTGCTGCCCTACATCACGGCC
AGTATCGTCATCCAGCTCCTCACCACCACCGTCCCCGCGCTGGAAAAACTCAGCAAGGAGGGGGAAGAAGGTCGCAAGAA
GATCAACCAGTACACCCGCTACGCGGCCATTGGCCTGGGCGCGGTGCAAGCGCTGTTCTTCTCGCTGTACATCACCAGCA
ATCCCGCCTTTATCGCGGTGGGCTGGGATCCCGGCATCTTCACGGTGCTGGTGATGGTGCTGACTCAGGTGGCTGGGATC
GCCTTTACCATGTGGATCGGTGAACGCATCACCGAGGTCGGGGTCGGCAACGGCATCAGCCTGATCATCACGGCGGGCAT
CATCGCCCGTTATCCGCAGGAGATCGCGGCGACCGGACAGCTCTTCCGCACCGATCAGGTATCGCTGCTCCAACTGGTGG
CGTTTGTTGTGGTCATCCTGGCAACCATCGCTGGGATTGTGTACGTGTATCAGGGCGAGCGGCGGGTGCCGGTGACCTAT
GCCCGCGCACGGGGTGGCGCTCCGACGGGCGCGGCGCGCAACTTGGGCGGGCAGGCCACCTGGCTCCCCATCAAGGTGAA
TCAGGCGGGCGTGATCCCCGTGATCTTCGCCAGTGCGATGCTGATTATTCCCAACCTGATTGCCAGCGCAACCGCCACGC
GCGCGCCTGAGGTGAACGCCTTTATCCAGACGTACCTGACGCCGGGAAGTCCGTGGTACATCGCACTCGAAGCCTTGCTG
ATCTTTGGGTTTACCTACCTGTACAACAGCGTGCAGTTTGATCCCCGGCGGATCAGTGAGCAGCTGCGCGAGGCAGGCGG
CTTCATTCCCGGGGTGCGTCCGGGGACGCCGACCGCTGAGTTCTTGGGGGGCATCAGCGGGCGCCTGAGCTTGTGGGGCG
CGATCTTCCTGGTGGTCCTCACCGTTGTGCCGCAGGTCGTGCAGCGGGTAACGGGGATCACGACCTTCCAGTTCAGCGGC
ACGGGCCTGCTGATTATTGTGGGTGTGGGCCTGGAAACGCTCAAGCAGCTCGAAGCGCAGCTCACAGTCCGTCGCTACGA
TGGCTTTATCAGCAAGGGCCGCATTCGCAGTCGTCTGAACGGCTAA

Upstream 100 bases:

>100_bases
GATGCCGCCAGTGAAGCGGCCATCCGGGCGGTGGAGGCGGCGGGCGGCCGGGTTGTTGTGACAGGCGCGGATCGTCAGAA
CGCCGAGCAGGCGGGCTAAT

Downstream 100 bases:

>100_bases
GCGGTGTTGCCCTGTCGTTGGCCGCTCACCTGTGTGGTGGGCGGTCTTTGTTTGATCTGCTGCCGGTTCCGTCACCATAG
AGGGAACAGGGCTGGGCAGC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLRAFRDAFRIPDLRRKIVFTLLLLAVFRLGSAIPTPGVNTDALQRATSGGLFGLISLISGGNLSQFSIFALGVLPYITA
SIVIQLLTTTVPALEKLSKEGEEGRKKINQYTRYAAIGLGAVQALFFSLYITSNPAFIAVGWDPGIFTVLVMVLTQVAGI
AFTMWIGERITEVGVGNGISLIITAGIIARYPQEIAATGQLFRTDQVSLLQLVAFVVVILATIAGIVYVYQGERRVPVTY
ARARGGAPTGAARNLGGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNAFIQTYLTPGSPWYIALEALL
IFGFTYLYNSVQFDPRRISEQLREAGGFIPGVRPGTPTAEFLGGISGRLSLWGAIFLVVLTVVPQVVQRVTGITTFQFSG
TGLLIIVGVGLETLKQLEAQLTVRRYDGFISKGRIRSRLNG

Sequences:

>Translated_441_residues
MLRAFRDAFRIPDLRRKIVFTLLLLAVFRLGSAIPTPGVNTDALQRATSGGLFGLISLISGGNLSQFSIFALGVLPYITA
SIVIQLLTTTVPALEKLSKEGEEGRKKINQYTRYAAIGLGAVQALFFSLYITSNPAFIAVGWDPGIFTVLVMVLTQVAGI
AFTMWIGERITEVGVGNGISLIITAGIIARYPQEIAATGQLFRTDQVSLLQLVAFVVVILATIAGIVYVYQGERRVPVTY
ARARGGAPTGAARNLGGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNAFIQTYLTPGSPWYIALEALL
IFGFTYLYNSVQFDPRRISEQLREAGGFIPGVRPGTPTAEFLGGISGRLSLWGAIFLVVLTVVPQVVQRVTGITTFQFSG
TGLLIIVGVGLETLKQLEAQLTVRRYDGFISKGRIRSRLNG
>Mature_441_residues
MLRAFRDAFRIPDLRRKIVFTLLLLAVFRLGSAIPTPGVNTDALQRATSGGLFGLISLISGGNLSQFSIFALGVLPYITA
SIVIQLLTTTVPALEKLSKEGEEGRKKINQYTRYAAIGLGAVQALFFSLYITSNPAFIAVGWDPGIFTVLVMVLTQVAGI
AFTMWIGERITEVGVGNGISLIITAGIIARYPQEIAATGQLFRTDQVSLLQLVAFVVVILATIAGIVYVYQGERRVPVTY
ARARGGAPTGAARNLGGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNAFIQTYLTPGSPWYIALEALL
IFGFTYLYNSVQFDPRRISEQLREAGGFIPGVRPGTPTAEFLGGISGRLSLWGAIFLVVLTVVPQVVQRVTGITTFQFSG
TGLLIIVGVGLETLKQLEAQLTVRRYDGFISKGRIRSRLNG

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=429, Percent_Identity=38.2284382284382, Blast_Score=254, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47437; Mature: 47437

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAFRDAFRIPDLRRKIVFTLLLLAVFRLGSAIPTPGVNTDALQRATSGGLFGLISLIS
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHC
GGNLSQFSIFALGVLPYITASIVIQLLTTTVPALEKLSKEGEEGRKKINQYTRYAAIGLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVQALFFSLYITSNPAFIAVGWDPGIFTVLVMVLTQVAGIAFTMWIGERITEVGVGNGIS
HHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LIITAGIIARYPQEIAATGQLFRTDQVSLLQLVAFVVVILATIAGIVYVYQGERRVPVTY
HHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE
ARARGGAPTGAARNLGGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNA
HHCCCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FIQTYLTPGSPWYIALEALLIFGFTYLYNSVQFDPRRISEQLREAGGFIPGVRPGTPTAE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
FLGGISGRLSLWGAIFLVVLTVVPQVVQRVTGITTFQFSGTGLLIIVGVGLETLKQLEAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHH
LTVRRYDGFISKGRIRSRLNG
HHHHHHHCHHHCCHHHHHCCC
>Mature Secondary Structure
MLRAFRDAFRIPDLRRKIVFTLLLLAVFRLGSAIPTPGVNTDALQRATSGGLFGLISLIS
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHC
GGNLSQFSIFALGVLPYITASIVIQLLTTTVPALEKLSKEGEEGRKKINQYTRYAAIGLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AVQALFFSLYITSNPAFIAVGWDPGIFTVLVMVLTQVAGIAFTMWIGERITEVGVGNGIS
HHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LIITAGIIARYPQEIAATGQLFRTDQVSLLQLVAFVVVILATIAGIVYVYQGERRVPVTY
HHHHHHHHHHCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE
ARARGGAPTGAARNLGGQATWLPIKVNQAGVIPVIFASAMLIIPNLIASATATRAPEVNA
HHCCCCCCCCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FIQTYLTPGSPWYIALEALLIFGFTYLYNSVQFDPRRISEQLREAGGFIPGVRPGTPTAE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
FLGGISGRLSLWGAIFLVVLTVVPQVVQRVTGITTFQFSGTGLLIIVGVGLETLKQLEAQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHH
LTVRRYDGFISKGRIRSRLNG
HHHHHHHCHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2110998; 2139212; 2113521; 8635744; 9384377 [H]