Click here to switch to the map view.

The map label for this gene is infA [H]

Identifier: 94985945

GI number: 94985945

Start: 1953955

End: 1954254

Strand: Reverse

Name: infA [H]

Synonym: Dgeo_1845

Alternate gene names: 94985945

Gene position: 1954254-1953955 (Counterclockwise)

Preceding gene: 94985946

Following gene: 94985944

Centisome position: 79.21

GC content: 55.67

Gene sequence:

>300_bases
ATGCTAGCTTTAGCTTTGGCTTGTATCAAGCCCGGAGGTTGCGTGACGAGACGAAAGATGCCGGAACAGCGGGAAAAGCG
AAAGAAGGAAGAGTCCGATGTCGTGCGCGCCGAAGGCGTGGTGGAAGAAGCACTGCCCAATACCACGTTCCGCGTCAAGC
TCGACAGCGGACACGATATTCTGGCGTATATCAGCGGCAAGATGCGGATTCACTACATCCGGATTCTGCCAGGTGACCGT
GTGGTTCTGGAAATCAGTCCGTACGATACGTCGCGCGGGCGCATCGTCTACCGCAAGTAA

Upstream 100 bases:

>100_bases
TGCGCTAGTTGGCTGCGGGCGGAGCAGCGCACCTTCCGGAGGAAACACCGGCAATTTCCACCCCCTGTTCGCCGTCCCTC
TTGCTGATTGGGATGAGGTC

Downstream 100 bases:

>100_bases
CATCCGGGCTGCGGTACCCAACAGATTCCCCGTTAAGGCCCGTGTGGTCAGGGGGGTCGAGCGCTGCCGGGCGCACCGTC
ATGATGGACGGTGACGTGAG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MLALALACIKPGGCVTRRKMPEQREKRKKEESDVVRAEGVVEEALPNTTFRVKLDSGHDILAYISGKMRIHYIRILPGDR
VVLEISPYDTSRGRIVYRK

Sequences:

>Translated_99_residues
MLALALACIKPGGCVTRRKMPEQREKRKKEESDVVRAEGVVEEALPNTTFRVKLDSGHDILAYISGKMRIHYIRILPGDR
VVLEISPYDTSRGRIVYRK
>Mature_99_residues
MLALALACIKPGGCVTRRKMPEQREKRKKEESDVVRAEGVVEEALPNTTFRVKLDSGHDILAYISGKMRIHYIRILPGDR
VVLEISPYDTSRGRIVYRK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787110, Length=66, Percent_Identity=59.0909090909091, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 11296; Mature: 11296

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALALACIKPGGCVTRRKMPEQREKRKKEESDVVRAEGVVEEALPNTTFRVKLDSGHDI
CCEEEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHCCCCEEEEEECCCCEE
LAYISGKMRIHYIRILPGDRVVLEISPYDTSRGRIVYRK
EEEEECCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MLALALACIKPGGCVTRRKMPEQREKRKKEESDVVRAEGVVEEALPNTTFRVKLDSGHDI
CCEEEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHCCCCEEEEEECCCCEE
LAYISGKMRIHYIRILPGDRVVLEISPYDTSRGRIVYRK
EEEEECCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA