| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is pgi [H]
Identifier: 94985405
GI number: 94985405
Start: 1384152
End: 1386101
Strand: Reverse
Name: pgi [H]
Synonym: Dgeo_1304
Alternate gene names: 94985405
Gene position: 1386101-1384152 (Counterclockwise)
Preceding gene: 94985408
Following gene: 94985404
Centisome position: 56.18
GC content: 65.18
Gene sequence:
>1950_bases ATGACAGGAGATCCTTTCGCAAGAAGGTCGGGGGCAGGAGACGGGACAGTTCGACCGACATTCAAGCGCGGGCGGCACTC GGTTTCCAGAGTCAGGGTCCGCTATTCGGAACGCCCGCACCTGACACTTGCGAGGTCAGACCCACGTGTTGGCCTGCACC TCGCCACCGCCCCATGGTCAGAGGCTCCGGCCTTCTTTGCCGTCTCTTCATGCCAAGCCTTCCGGTTCGGGCGGATTGGG GGCCGCTGGTATGCTCGCCCCATGCGTGACTCTTCCTCCCCGGCGCGGCCCTCCCTGACCCAGCTTCCCGCCTGGCAGGC CCTGAAGTCGCACTTTGAGACGATGCGCGACAGGCATCTGCGCGACCTCTTCGCTGCCGACCCCCGGCGCGGCGAACGCC TGGTTGCCGAGGGGGCGGGCGTCTACCTCGACTACTCCAAAAACCGCATAACGGACGAGACGCTGCGCCTGCTGCTGCAA CTTGCGCGCGAAGCGGGGGTAGAGGCGCGGCGCGACGCAATGTTCGCGGGCGAGCGCATCAACCTGACGGAGAACCGCGC GGTGCTGCATTCTGCCCTGCGCGCTCCGCGCGGCGCAGCCGTGACCGTGGACGGCACGAATGTGGTGCAGGAGGTGCAGG AGGTGCTGGACCGCATGAGCGCCTTCGCGGACCGCGTGCGCGCCGGGACCTGGCTGGGCGCGACCGGCAAGCCCATCCGC AACATCGTGAACATCGGCATCGGCGGCTCGGATCTCGGTCCGGTGATGGCCTACGAGGCGCTGAAGTTTTACGCGGACCG CCGCCTCACGCTGCGCTTCGTGTCCAATGTGGACGGCACCGATCTGGTGGAGAAGACCCGCGACCTCGACCCGGCAGAAA CCCTCTTCATCGTGTCCAGCAAGACCTTCACTACGCTGGAGACGATGGCGAACGCGCAAAGCGCGCGGGCCTGGCTGCTT GCTGGGCTGGAGAACGTGCCGGATGAGAACGCGGCGATTGCCCGCCCCATCATCAGCAGGCACTTCGTCGCCGTCAGCAC AAACGCTGCCGAGGTCGAGCGTTTCGGGATCGACACCGCGAACATGTTTGGCTTCTGGGACTGGGTGGGGGGCCGCTACA GCGTGGACAGCGCAATCGGTCTCTCACTGATGATCGCCATCGGGCCGAACGGCTTCCGCGACTTTCTGGCGGGCTTTCAC GCCATGGACGAGCATTTCCGCAGCGCGCCCCTGGAACAGAATCTCCCCGTCCTGCTGGGTGTTCTGGGCGTGTGGTACCG TAACTTTTTCGGTGCGCAGACCTACGCGGTGCTGCCCTATGACCAGTACCTCGCCTACTTCCCGACCTATCTCCAGCAGC TTGACATGGAGAGCAACGGCAAACACGTCACCCTCGACGGGCAACCGGTGGACTACGACACCGGCCCGGTGGTGTGGGGG CAGCCGGGAACGAACGGCCAGCATGCCTTTTACCAACTCATCCACCAGGGCACCACGCTGATTCCCTGCGATTTCCTGGG CTTCTGCCAGACCCTCAACCCCCTGCCCACCCCGGGCGGCCCCTCTCACCATGACCTCCTGATGGCGAACATGTTCGCAC AGACCGAAGCCCTGGCCTTCGGCAAGTCGCTCGAGCAGGTGCAGGCTGAGGGGGTGGCCGCTGACCTCGCTCCACACCGC GTCTTTGAGGGCAACCGGCCCACGAACACGCTGCTGTTAGACCGCCTCACGCCCCGCACGCTGGGCACCCTGATCGCCCT CTACGAACACAAGGTCTTTGTGCAGGGTGCGATCTGGAACATCAACTCCTTTGATCAGTGGGGCGTCGAACTCGGTAAGG TGCTGGCCAGCAAGATCGTGCCGGAACTGGAGGCGCCGGGCGAGCCGGAGCTGAAGCACGACTCCAGCACCAACGCCTTG ATCCGGCGCTACCGAGCGCGCCGGAGATAA
Upstream 100 bases:
>100_bases GCGCACAGCCGAGAGCGAACCGCGAATCGCGCCGATGGGCGAACGAACCGCGGAAACAATCACCACATCGCGGTCTTGCA GGACAGGGGAGGAGGTGGAC
Downstream 100 bases:
>100_bases GGGCGAGGGGGCAAATTGGGCCAGAGCCGTCCAGCCCCCCGCGCTCTCCACCGTTTGCTCGCCTGTTCCTCACCTCCTGC CTCTAGCCTGCCGGGATGAT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MTGDPFARRSGAGDGTVRPTFKRGRHSVSRVRVRYSERPHLTLARSDPRVGLHLATAPWSEAPAFFAVSSCQAFRFGRIG GRWYARPMRDSSSPARPSLTQLPAWQALKSHFETMRDRHLRDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQ LAREAGVEARRDAMFAGERINLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIR NIVNIGIGGSDLGPVMAYEALKFYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSSKTFTTLETMANAQSARAWLL AGLENVPDENAAIARPIISRHFVAVSTNAAEVERFGIDTANMFGFWDWVGGRYSVDSAIGLSLMIAIGPNGFRDFLAGFH AMDEHFRSAPLEQNLPVLLGVLGVWYRNFFGAQTYAVLPYDQYLAYFPTYLQQLDMESNGKHVTLDGQPVDYDTGPVVWG QPGTNGQHAFYQLIHQGTTLIPCDFLGFCQTLNPLPTPGGPSHHDLLMANMFAQTEALAFGKSLEQVQAEGVAADLAPHR VFEGNRPTNTLLLDRLTPRTLGTLIALYEHKVFVQGAIWNINSFDQWGVELGKVLASKIVPELEAPGEPELKHDSSTNAL IRRYRARRR
Sequences:
>Translated_649_residues MTGDPFARRSGAGDGTVRPTFKRGRHSVSRVRVRYSERPHLTLARSDPRVGLHLATAPWSEAPAFFAVSSCQAFRFGRIG GRWYARPMRDSSSPARPSLTQLPAWQALKSHFETMRDRHLRDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQ LAREAGVEARRDAMFAGERINLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIR NIVNIGIGGSDLGPVMAYEALKFYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSSKTFTTLETMANAQSARAWLL AGLENVPDENAAIARPIISRHFVAVSTNAAEVERFGIDTANMFGFWDWVGGRYSVDSAIGLSLMIAIGPNGFRDFLAGFH AMDEHFRSAPLEQNLPVLLGVLGVWYRNFFGAQTYAVLPYDQYLAYFPTYLQQLDMESNGKHVTLDGQPVDYDTGPVVWG QPGTNGQHAFYQLIHQGTTLIPCDFLGFCQTLNPLPTPGGPSHHDLLMANMFAQTEALAFGKSLEQVQAEGVAADLAPHR VFEGNRPTNTLLLDRLTPRTLGTLIALYEHKVFVQGAIWNINSFDQWGVELGKVLASKIVPELEAPGEPELKHDSSTNAL IRRYRARRR >Mature_648_residues TGDPFARRSGAGDGTVRPTFKRGRHSVSRVRVRYSERPHLTLARSDPRVGLHLATAPWSEAPAFFAVSSCQAFRFGRIGG RWYARPMRDSSSPARPSLTQLPAWQALKSHFETMRDRHLRDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQL AREAGVEARRDAMFAGERINLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIRN IVNIGIGGSDLGPVMAYEALKFYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSSKTFTTLETMANAQSARAWLLA GLENVPDENAAIARPIISRHFVAVSTNAAEVERFGIDTANMFGFWDWVGGRYSVDSAIGLSLMIAIGPNGFRDFLAGFHA MDEHFRSAPLEQNLPVLLGVLGVWYRNFFGAQTYAVLPYDQYLAYFPTYLQQLDMESNGKHVTLDGQPVDYDTGPVVWGQ PGTNGQHAFYQLIHQGTTLIPCDFLGFCQTLNPLPTPGGPSHHDLLMANMFAQTEALAFGKSLEQVQAEGVAADLAPHRV FEGNRPTNTLLLDRLTPRTLGTLIALYEHKVFVQGAIWNINSFDQWGVELGKVLASKIVPELEAPGEPELKHDSSTNALI RRYRARRR
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=565, Percent_Identity=52.212389380531, Blast_Score=585, Evalue=1e-167, Organism=Homo sapiens, GI296080693, Length=573, Percent_Identity=48.8656195462478, Blast_Score=535, Evalue=1e-152, Organism=Escherichia coli, GI1790457, Length=558, Percent_Identity=55.1971326164875, Blast_Score=611, Evalue=1e-176, Organism=Caenorhabditis elegans, GI71996708, Length=565, Percent_Identity=53.2743362831858, Blast_Score=570, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71996703, Length=557, Percent_Identity=53.5008976660682, Blast_Score=569, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6319673, Length=564, Percent_Identity=51.9503546099291, Blast_Score=579, Evalue=1e-166, Organism=Drosophila melanogaster, GI24651916, Length=567, Percent_Identity=53.6155202821869, Blast_Score=591, Evalue=1e-169, Organism=Drosophila melanogaster, GI24651914, Length=567, Percent_Identity=53.6155202821869, Blast_Score=591, Evalue=1e-169, Organism=Drosophila melanogaster, GI17737445, Length=567, Percent_Identity=53.6155202821869, Blast_Score=591, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 71948; Mature: 71817
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGDPFARRSGAGDGTVRPTFKRGRHSVSRVRVRYSERPHLTLARSDPRVGLHLATAPWS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEECCCCCCEEEEEECCCC EAPAFFAVSSCQAFRFGRIGGRWYARPMRDSSSPARPSLTQLPAWQALKSHFETMRDRHL CCCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHH RDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQLAREAGVEARRDAMFAGERI HHHHHCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEE NLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIR CCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH NIVNIGIGGSDLGPVMAYEALKFYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSS HHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEC KTFTTLETMANAQSARAWLLAGLENVPDENAAIARPIISRHFVAVSTNAAEVERFGIDTA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHCCCHH NMFGFWDWVGGRYSVDSAIGLSLMIAIGPNGFRDFLAGFHAMDEHFRSAPLEQNLPVLLG HHHHHHHCCCCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH VLGVWYRNFFGAQTYAVLPYDQYLAYFPTYLQQLDMESNGKHVTLDGQPVDYDTGPVVWG HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEC QPGTNGQHAFYQLIHQGTTLIPCDFLGFCQTLNPLPTPGGPSHHDLLMANMFAQTEALAF CCCCCCHHHHHHHHHCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GKSLEQVQAEGVAADLAPHRVFEGNRPTNTLLLDRLTPRTLGTLIALYEHKVFVQGAIWN HHHHHHHHHCCCHHHCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCEEEEEEEEEC INSFDQWGVELGKVLASKIVPELEAPGEPELKHDSSTNALIRRYRARRR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TGDPFARRSGAGDGTVRPTFKRGRHSVSRVRVRYSERPHLTLARSDPRVGLHLATAPWS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEECCCCCCEEEEEECCCC EAPAFFAVSSCQAFRFGRIGGRWYARPMRDSSSPARPSLTQLPAWQALKSHFETMRDRHL CCCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHH RDLFAADPRRGERLVAEGAGVYLDYSKNRITDETLRLLLQLAREAGVEARRDAMFAGERI HHHHHCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCEE NLTENRAVLHSALRAPRGAAVTVDGTNVVQEVQEVLDRMSAFADRVRAGTWLGATGKPIR CCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH NIVNIGIGGSDLGPVMAYEALKFYADRRLTLRFVSNVDGTDLVEKTRDLDPAETLFIVSS HHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEC KTFTTLETMANAQSARAWLLAGLENVPDENAAIARPIISRHFVAVSTNAAEVERFGIDTA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCEEEEECCHHHHHHHCCCHH NMFGFWDWVGGRYSVDSAIGLSLMIAIGPNGFRDFLAGFHAMDEHFRSAPLEQNLPVLLG HHHHHHHCCCCCEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH VLGVWYRNFFGAQTYAVLPYDQYLAYFPTYLQQLDMESNGKHVTLDGQPVDYDTGPVVWG HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEC QPGTNGQHAFYQLIHQGTTLIPCDFLGFCQTLNPLPTPGGPSHHDLLMANMFAQTEALAF CCCCCCHHHHHHHHHCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GKSLEQVQAEGVAADLAPHRVFEGNRPTNTLLLDRLTPRTLGTLIALYEHKVFVQGAIWN HHHHHHHHHCCCHHHCCCHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCEEEEEEEEEC INSFDQWGVELGKVLASKIVPELEAPGEPELKHDSSTNALIRRYRARRR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA