| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985280
Identifier: 94985280
GI number: 94985280
Start: 1251231
End: 1251617
Strand: Reverse
Name: 94985280
Synonym: Dgeo_1178
Alternate gene names: NA
Gene position: 1251617-1251231 (Counterclockwise)
Preceding gene: 94985281
Following gene: 94985268
Centisome position: 50.73
GC content: 58.4
Gene sequence:
>387_bases ATGAAGGCGCGTGCCAAAGAGCTGAAGGCGGAAGCGCGTGCCAACAAGAACAGGGCAGATGGTGAAAGGGATGTGCTTGC CAAGATCGCCGAGATGCCGGAATCAGAGCGCGCTCTGGCCACGCAACTTCATGCGATCATCACGGCCAGTGCGCCAGAGC TTTCGCCAAAGACCTGGTATGGCATGCCCGCGTATGCCCGGGACGGCAAGATCGTTTGCTACTTTCAAAGTGCGCAGAAA TTTGGCTCGAGATACGCAACGTTCGGCTTTAACGACACCGCGAACCTCGACGAAGGAGCCATGTGGCCGACCTCCTTCGC CCTGAAGGAATTGACTGCCGACGTCGAGGCCCGGATTGTTGCCCTCGTGAAGAGGGCCATGAGCTGA
Upstream 100 bases:
>100_bases GTTCTTTTGGTCCAGTACGCTATCGACCATGAAGTCCGCCATGAACACGACTCCGCAGCACCAGACGTCCCAGGGCTTCA CCGCTGAGGAGCGAGCCGCC
Downstream 100 bases:
>100_bases GAGCCAAGCGCCGGCCGCAGGACTTTACCAGCGTCACTTCACCCGTGTCTTCTCGGGCAGGGTTCGCCGGGCAGCCTCAG CCTTGCCAGACGGCCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKARAKELKAEARANKNRADGERDVLAKIAEMPESERALATQLHAIITASAPELSPKTWYGMPAYARDGKIVCYFQSAQK FGSRYATFGFNDTANLDEGAMWPTSFALKELTADVEARIVALVKRAMS
Sequences:
>Translated_128_residues MKARAKELKAEARANKNRADGERDVLAKIAEMPESERALATQLHAIITASAPELSPKTWYGMPAYARDGKIVCYFQSAQK FGSRYATFGFNDTANLDEGAMWPTSFALKELTADVEARIVALVKRAMS >Mature_128_residues MKARAKELKAEARANKNRADGERDVLAKIAEMPESERALATQLHAIITASAPELSPKTWYGMPAYARDGKIVCYFQSAQK FGSRYATFGFNDTANLDEGAMWPTSFALKELTADVEARIVALVKRAMS
Specific function: Unknown
COG id: COG5646
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14116; Mature: 14116
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARAKELKAEARANKNRADGERDVLAKIAEMPESERALATQLHAIITASAPELSPKTWY CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC GMPAYARDGKIVCYFQSAQKFGSRYATFGFNDTANLDEGAMWPTSFALKELTADVEARIV CCCCCCCCCCEEEEEHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVKRAMS HHHHHHCC >Mature Secondary Structure MKARAKELKAEARANKNRADGERDVLAKIAEMPESERALATQLHAIITASAPELSPKTWY CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC GMPAYARDGKIVCYFQSAQKFGSRYATFGFNDTANLDEGAMWPTSFALKELTADVEARIV CCCCCCCCCCEEEEEHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVKRAMS HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA