Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 94985281

GI number: 94985281

Start: 1251841

End: 1253019

Strand: Reverse

Name: mmgC [H]

Synonym: Dgeo_1179

Alternate gene names: 94985281

Gene position: 1253019-1251841 (Counterclockwise)

Preceding gene: 94985282

Following gene: 94985280

Centisome position: 50.79

GC content: 67.85

Gene sequence:

>1179_bases
ATGACCACCACGACTGCCGCCGAGGGCGGGATGACCTTTGCTCTCTCGGACGAACAGCGCATGATCGTGCAGCATGTCCG
CGAGTTTTGCCGCGCCGAGATTGCCCCCAAGGCCGCTGAATACGACCGCAGCGGCGCGTACCCCCGCGAGCAGCTGCGCG
GCCTGGCCGAGCTGGGCCTGCTGGGTGCCACTGTGCCCGAGGGGTGGGACGGCGCGGGCCTCGATTCCGTCACCTACGCC
CTATGCCTCGAAGAAATTGCCGCCGCTGACGCGAGCGTGGCCGTGATCGTCAGTGTCCAAAACGGCCTCCCAGAGCAGAT
GATTCTGAAGTACGGCACCGACGCGCAGCGCGAAAGCTACTTGCGCCCCCTTGCCCGCGGTGAACACCTCGGCGCCTTCT
GTCTCACCGAGCCGGGCGCGGGCAGCGACGCGGCCAGCCTGTGCCTCCGGGCCGAACGCGAGGGAGACGAGTGGGTCCTA
CACGGCAGCAAGGCGTGGATCACGTCGGGCGGCCAGGCGGATACCTACCTTGTGATGGCCCGCACCGGTGGTCCCGGCGC
ACGCGGCATCTCCTGCTTCATCGTGCCAAAGGACATGCCCGGCCTCAGCTTCGGTCGCCCCGAGGAAAAGCTGGGTCTGC
ACGCTGCCCACACCACCACCGTCACCTTCGACGGGGTGCGCGTGCCCGCAGAGAACATGGTCGGGGAGGAAGGCCAAGGC
CTGGTGATCGCCCTCGCCAGCCTCGATGCGGGCCGCATTGGGATCGCGATGCAGGCGCTCGGGATTGCGCGCGCCGCGCT
GGAACATGCCGCCCGCTACGCCTCCGAGCGCGAGCAGTTCGGCCGCCCGCTCAAGGAGTTCGAGGGTGTCTCCTTTAAGG
TCGCGCGGATGGCGGCCCGCATCGAGTCGGCCCGCCTGGTGGCCCTCAAGGCTGCCTGGCTCAAGGACCAGGGCCGGCCC
TACGGCAAGGAAGCCAGCATCGCCAAGCTGCTTGCCTCCGAAACAGCGGTGGACTGCGCCCGCGACGCCATCCAAATTTT
CGGCGGCAACGGCTACAGCCGCGAGTACCCGGTCGAGCGCCTCTACCGTGACGCCAAGGTGACCGAGATCTACGAGGGCA
CCTCCGAGATTCAGCAGCTCGTGATCAGCCGGGCGGTGTTTGCCGAGTACGGGGGATAA

Upstream 100 bases:

>100_bases
ATCGAGGAGGCGCTGGTGCAGGCCCTGGGACGTGAAGCGTAGGCAGGTACGGTCTTCCTTCCTGCCCCCCGCCCTAACAA
GCGTTTGGTAGCCTGAGGGT

Downstream 100 bases:

>100_bases
CTCTTCAGTTCGCTTCAGAGTGGAGTTGTCCTGATGGGCAGCGGCGTCCCGGAGATGATGCCTGCAGAGCGTCCGACTTT
GAGCATAGGCAGGACGTGCT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTTTTAAEGGMTFALSDEQRMIVQHVREFCRAEIAPKAAEYDRSGAYPREQLRGLAELGLLGATVPEGWDGAGLDSVTYA
LCLEEIAAADASVAVIVSVQNGLPEQMILKYGTDAQRESYLRPLARGEHLGAFCLTEPGAGSDAASLCLRAEREGDEWVL
HGSKAWITSGGQADTYLVMARTGGPGARGISCFIVPKDMPGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQG
LVIALASLDAGRIGIAMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAARIESARLVALKAAWLKDQGRP
YGKEASIAKLLASETAVDCARDAIQIFGGNGYSREYPVERLYRDAKVTEIYEGTSEIQQLVISRAVFAEYGG

Sequences:

>Translated_392_residues
MTTTTAAEGGMTFALSDEQRMIVQHVREFCRAEIAPKAAEYDRSGAYPREQLRGLAELGLLGATVPEGWDGAGLDSVTYA
LCLEEIAAADASVAVIVSVQNGLPEQMILKYGTDAQRESYLRPLARGEHLGAFCLTEPGAGSDAASLCLRAEREGDEWVL
HGSKAWITSGGQADTYLVMARTGGPGARGISCFIVPKDMPGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQG
LVIALASLDAGRIGIAMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAARIESARLVALKAAWLKDQGRP
YGKEASIAKLLASETAVDCARDAIQIFGGNGYSREYPVERLYRDAKVTEIYEGTSEIQQLVISRAVFAEYGG
>Mature_391_residues
TTTTAAEGGMTFALSDEQRMIVQHVREFCRAEIAPKAAEYDRSGAYPREQLRGLAELGLLGATVPEGWDGAGLDSVTYAL
CLEEIAAADASVAVIVSVQNGLPEQMILKYGTDAQRESYLRPLARGEHLGAFCLTEPGAGSDAASLCLRAEREGDEWVLH
GSKAWITSGGQADTYLVMARTGGPGARGISCFIVPKDMPGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQGL
VIALASLDAGRIGIAMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAARIESARLVALKAAWLKDQGRPY
GKEASIAKLLASETAVDCARDAIQIFGGNGYSREYPVERLYRDAKVTEIYEGTSEIQQLVISRAVFAEYGG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=46.684350132626, Blast_Score=343, Evalue=2e-94,
Organism=Homo sapiens, GI4501859, Length=388, Percent_Identity=43.0412371134021, Blast_Score=321, Evalue=1e-87,
Organism=Homo sapiens, GI4557231, Length=385, Percent_Identity=40.5194805194805, Blast_Score=300, Evalue=1e-81,
Organism=Homo sapiens, GI187960098, Length=385, Percent_Identity=40.5194805194805, Blast_Score=300, Evalue=1e-81,
Organism=Homo sapiens, GI7656849, Length=379, Percent_Identity=37.9947229551451, Blast_Score=279, Evalue=4e-75,
Organism=Homo sapiens, GI226958412, Length=381, Percent_Identity=38.3202099737533, Blast_Score=277, Evalue=2e-74,
Organism=Homo sapiens, GI226958414, Length=345, Percent_Identity=37.6811594202899, Blast_Score=250, Evalue=1e-66,
Organism=Homo sapiens, GI21361497, Length=381, Percent_Identity=38.3202099737533, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI76496475, Length=340, Percent_Identity=38.5294117647059, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI4557235, Length=340, Percent_Identity=38.5294117647059, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI4501857, Length=380, Percent_Identity=32.1052631578947, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI4503943, Length=374, Percent_Identity=35.5614973262032, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI7669494, Length=360, Percent_Identity=35.2777777777778, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI48976061, Length=341, Percent_Identity=32.5513196480938, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI211971008, Length=341, Percent_Identity=32.258064516129, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI38505218, Length=395, Percent_Identity=28.8607594936709, Blast_Score=138, Evalue=8e-33,
Organism=Homo sapiens, GI218563752, Length=233, Percent_Identity=28.3261802575107, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI156104866, Length=324, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI156104864, Length=324, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=387, Percent_Identity=34.3669250645995, Blast_Score=204, Evalue=8e-54,
Organism=Escherichia coli, GI1786223, Length=384, Percent_Identity=32.2916666666667, Blast_Score=188, Evalue=7e-49,
Organism=Escherichia coli, GI87082384, Length=272, Percent_Identity=32.3529411764706, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI87081702, Length=390, Percent_Identity=27.6923076923077, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=377, Percent_Identity=40.8488063660477, Blast_Score=297, Evalue=8e-81,
Organism=Caenorhabditis elegans, GI17534899, Length=384, Percent_Identity=39.0625, Blast_Score=291, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI17569725, Length=384, Percent_Identity=38.5416666666667, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=38.4615384615385, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI17570075, Length=391, Percent_Identity=39.386189258312, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI17533517, Length=371, Percent_Identity=35.5795148247978, Blast_Score=254, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=36.0313315926893, Blast_Score=254, Evalue=8e-68,
Organism=Caenorhabditis elegans, GI71990804, Length=318, Percent_Identity=38.6792452830189, Blast_Score=228, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI71985184, Length=350, Percent_Identity=36.2857142857143, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17534353, Length=374, Percent_Identity=32.0855614973262, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI71985192, Length=297, Percent_Identity=35.016835016835, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=39.5744680851064, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=33.2116788321168, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=388, Percent_Identity=28.0927835051546, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17505929, Length=374, Percent_Identity=28.3422459893048, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=34.8547717842324, Blast_Score=145, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17562446, Length=334, Percent_Identity=29.0419161676647, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17531913, Length=183, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=277, Percent_Identity=29.2418772563177, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=277, Percent_Identity=29.2418772563177, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=48.1481481481481, Blast_Score=362, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24646207, Length=379, Percent_Identity=45.910290237467, Blast_Score=338, Evalue=5e-93,
Organism=Drosophila melanogaster, GI24660351, Length=383, Percent_Identity=43.0809399477807, Blast_Score=310, Evalue=7e-85,
Organism=Drosophila melanogaster, GI24666513, Length=391, Percent_Identity=37.5959079283887, Blast_Score=281, Evalue=8e-76,
Organism=Drosophila melanogaster, GI21355753, Length=383, Percent_Identity=37.0757180156658, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI281363737, Length=355, Percent_Identity=34.6478873239437, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI19920834, Length=376, Percent_Identity=33.5106382978723, Blast_Score=187, Evalue=9e-48,
Organism=Drosophila melanogaster, GI221473076, Length=355, Percent_Identity=25.0704225352113, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45550141, Length=355, Percent_Identity=25.0704225352113, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24652780, Length=272, Percent_Identity=23.8970588235294, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41994; Mature: 41863

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTAAEGGMTFALSDEQRMIVQHVREFCRAEIAPKAAEYDRSGAYPREQLRGLAELGL
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH
LGATVPEGWDGAGLDSVTYALCLEEIAAADASVAVIVSVQNGLPEQMILKYGTDAQRESY
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHHHHH
LRPLARGEHLGAFCLTEPGAGSDAASLCLRAEREGDEWVLHGSKAWITSGGQADTYLVMA
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEEEEE
RTGGPGARGISCFIVPKDMPGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQG
ECCCCCCCCEEEEEEECCCCCCCCCCCHHHHCEEEEEEEEEEECCEECCHHHHCCCCCCE
LVIALASLDAGRIGIAMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAAR
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHH
IESARLVALKAAWLKDQGRPYGKEASIAKLLASETAVDCARDAIQIFGGNGYSREYPVER
HHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHH
LYRDAKVTEIYEGTSEIQQLVISRAVFAEYGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTTAAEGGMTFALSDEQRMIVQHVREFCRAEIAPKAAEYDRSGAYPREQLRGLAELGL
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHH
LGATVPEGWDGAGLDSVTYALCLEEIAAADASVAVIVSVQNGLPEQMILKYGTDAQRESY
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCCHHHHHH
LRPLARGEHLGAFCLTEPGAGSDAASLCLRAEREGDEWVLHGSKAWITSGGQADTYLVMA
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCEEEEEE
RTGGPGARGISCFIVPKDMPGLSFGRPEEKLGLHAAHTTTVTFDGVRVPAENMVGEEGQG
ECCCCCCCCEEEEEEECCCCCCCCCCCHHHHCEEEEEEEEEEECCEECCHHHHCCCCCCE
LVIALASLDAGRIGIAMQALGIARAALEHAARYASEREQFGRPLKEFEGVSFKVARMAAR
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHH
IESARLVALKAAWLKDQGRPYGKEASIAKLLASETAVDCARDAIQIFGGNGYSREYPVER
HHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHH
LYRDAKVTEIYEGTSEIQQLVISRAVFAEYGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]