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The map label for this gene is 94985261

Identifier: 94985261

GI number: 94985261

Start: 1230738

End: 1232270

Strand: Reverse

Name: 94985261

Synonym: Dgeo_1159

Alternate gene names: NA

Gene position: 1232270-1230738 (Counterclockwise)

Preceding gene: 94985262

Following gene: 94985258

Centisome position: 49.95

GC content: 63.8

Gene sequence:

>1533_bases
TTGAGTTACTGGCGCACTGAAATCAAACCGCTGCTGGACGCAGAGACGGGGACCCTCTTCAAGCAGGCCCCGATTCGCGT
CACCTTGGCTTTTCCCAATCGTTACTCCGTGGGGATGGCTTCGCTGGGCTATCAGGTCATCTACCGGATGTTGAACCGGG
AGGAGGGTGTCGCCTGTGAGCGAGCTTTCCTGCCCGACGACGTCGAGGCCTTTGAGCGCAGCGGGCAGCCCCTTCCCACC
GTCGAATCGGGCCGCGCGGCGGGCGACTGCGAGCTGTTTGCGCTCAGTGTCTCCTTCGAGCTGGACCTCACCAACATCAT
CCGCACGCTCGATGTGGCCGGACTGCGCCCGCTGCGCGAAGAGCGCGACGACACCGACCCCATCGTGATGATCGGCGGCC
CCTTCACGTCCTCCAATCCCTATCCCCTCACGCCCTTTGCGGACGTGATTGTGATTGGAGACGGCGAGCAGATTGTGCCG
GTGGTCGCCGAGGCCCTGCGCGAGGCGAGCACGCGCGAGGAGTTCTACGACCTGATCGACGGACTGCCCGGGATTTTCCT
CCCGGCTCGCCACGTCCACGAACCAACCTGGGCGACGGCCCCCAAGGAACTGCTTCCGGCCTACTCCCAGATCGTCACGC
CGCACAGCGAACTCAGCAACATGTTCTTGGTGGAGGCGCAGCGGGGCTGCCCCCGCCCCTGCACCTTCTGCCTGGCCCGC
ACCATGTACGGCCCCAACCGCAACAACCAGGCGCAGGAGCTGCTGGACGTGATTCCGGACTGGGTGGAGAAGGTCGGTCT
GGTCGGCGCGGCTCTCTCGGATTTCCCGCACACCAAATACGTGGGGCGGGTCCTGACCGAGCGGGGCATCAAGTTGGGCG
TGAGCAGCATCCGCGCCGACACGGTGGACGAAGAACTGGCTGCGATTCTGAAAGCGGGTGGCCTGCGCACCTTTACCGTG
GCCTCCGACGCGCCCTCTGAACGGTTGCGCCGCTGGCTGAAAAAGGGCATCACCACCGAAGACCTGATCAAGACCGCGCA
GATCAGCCGCGACCTGGGCTTTTCCGGCATCAAGGTCTATATGATGATCGGCCTGGGCCCGGAGACGGACGACGACATCA
CCGAGCTGATCTCATTTACGAAAGACCTTGCCAAGATCAACCGGGTCGCGCTGGGCATCAGTCCCTTTGTGCCCAAACGC
CACACGCCGCACTTCGCCGACCCCTTTGCGGGCGTCGTCACCATCGAGCGGCGCCTCAAGCGCATCCAGAAGGAGCTGCG
CACGACCGCCGAACTCCGCAACGTATCTGCCAAGTGGGCCTGGGTTGAATCGGTGATTGCGCGCGGCGGCCCAGAGGTGG
GGATGGCTGCCTACCGGATCTACAGAAACGAGAGCATCGGCGCCTGGAAAAAGGCGCTGGAAGAAGTCGGATGGCGCGAC
GAATTTGAGTCCAACACGCCTGTGATCGAGCTTCCACCCGGGCAGTATGCGGCGAAGGAAGTGAGCGCCCACGCGCAGGG
GCTAGCCGTTTAA

Upstream 100 bases:

>100_bases
CCCGCTTCAGTTCGAACAACAAAACCCGCTACAATAAACGGCTGTGACGTGCGCTGCTCTCTAGAGTGTAGAAGACTCTC
CGGCGCCGTCTGGAGGCTTC

Downstream 100 bases:

>100_bases
AGAGTTTAAAGAGATGGAAGGCAGCGGGCGACTCTTGGTCCGCTGCCTTTCGCGTTTTGCTGCTTGTCCGCCCTAACTTG
TCCGTGCCTCCCGCAGCCGC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSYWRTEIKPLLDAETGTLFKQAPIRVTLAFPNRYSVGMASLGYQVIYRMLNREEGVACERAFLPDDVEAFERSGQPLPT
VESGRAAGDCELFALSVSFELDLTNIIRTLDVAGLRPLREERDDTDPIVMIGGPFTSSNPYPLTPFADVIVIGDGEQIVP
VVAEALREASTREEFYDLIDGLPGIFLPARHVHEPTWATAPKELLPAYSQIVTPHSELSNMFLVEAQRGCPRPCTFCLAR
TMYGPNRNNQAQELLDVIPDWVEKVGLVGAALSDFPHTKYVGRVLTERGIKLGVSSIRADTVDEELAAILKAGGLRTFTV
ASDAPSERLRRWLKKGITTEDLIKTAQISRDLGFSGIKVYMMIGLGPETDDDITELISFTKDLAKINRVALGISPFVPKR
HTPHFADPFAGVVTIERRLKRIQKELRTTAELRNVSAKWAWVESVIARGGPEVGMAAYRIYRNESIGAWKKALEEVGWRD
EFESNTPVIELPPGQYAAKEVSAHAQGLAV

Sequences:

>Translated_510_residues
MSYWRTEIKPLLDAETGTLFKQAPIRVTLAFPNRYSVGMASLGYQVIYRMLNREEGVACERAFLPDDVEAFERSGQPLPT
VESGRAAGDCELFALSVSFELDLTNIIRTLDVAGLRPLREERDDTDPIVMIGGPFTSSNPYPLTPFADVIVIGDGEQIVP
VVAEALREASTREEFYDLIDGLPGIFLPARHVHEPTWATAPKELLPAYSQIVTPHSELSNMFLVEAQRGCPRPCTFCLAR
TMYGPNRNNQAQELLDVIPDWVEKVGLVGAALSDFPHTKYVGRVLTERGIKLGVSSIRADTVDEELAAILKAGGLRTFTV
ASDAPSERLRRWLKKGITTEDLIKTAQISRDLGFSGIKVYMMIGLGPETDDDITELISFTKDLAKINRVALGISPFVPKR
HTPHFADPFAGVVTIERRLKRIQKELRTTAELRNVSAKWAWVESVIARGGPEVGMAAYRIYRNESIGAWKKALEEVGWRD
EFESNTPVIELPPGQYAAKEVSAHAQGLAV
>Mature_509_residues
SYWRTEIKPLLDAETGTLFKQAPIRVTLAFPNRYSVGMASLGYQVIYRMLNREEGVACERAFLPDDVEAFERSGQPLPTV
ESGRAAGDCELFALSVSFELDLTNIIRTLDVAGLRPLREERDDTDPIVMIGGPFTSSNPYPLTPFADVIVIGDGEQIVPV
VAEALREASTREEFYDLIDGLPGIFLPARHVHEPTWATAPKELLPAYSQIVTPHSELSNMFLVEAQRGCPRPCTFCLART
MYGPNRNNQAQELLDVIPDWVEKVGLVGAALSDFPHTKYVGRVLTERGIKLGVSSIRADTVDEELAAILKAGGLRTFTVA
SDAPSERLRRWLKKGITTEDLIKTAQISRDLGFSGIKVYMMIGLGPETDDDITELISFTKDLAKINRVALGISPFVPKRH
TPHFADPFAGVVTIERRLKRIQKELRTTAELRNVSAKWAWVESVIARGGPEVGMAAYRIYRNESIGAWKKALEEVGWRDE
FESNTPVIELPPGQYAAKEVSAHAQGLAV

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 56495; Mature: 56364

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYWRTEIKPLLDAETGTLFKQAPIRVTLAFPNRYSVGMASLGYQVIYRMLNREEGVACE
CCCCHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
RAFLPDDVEAFERSGQPLPTVESGRAAGDCELFALSVSFELDLTNIIRTLDVAGLRPLRE
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCHHHH
ERDDTDPIVMIGGPFTSSNPYPLTPFADVIVIGDGEQIVPVVAEALREASTREEFYDLID
CCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLPGIFLPARHVHEPTWATAPKELLPAYSQIVTPHSELSNMFLVEAQRGCPRPCTFCLAR
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHH
TMYGPNRNNQAQELLDVIPDWVEKVGLVGAALSDFPHTKYVGRVLTERGIKLGVSSIRAD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
TVDEELAAILKAGGLRTFTVASDAPSERLRRWLKKGITTEDLIKTAQISRDLGFSGIKVY
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
MMIGLGPETDDDITELISFTKDLAKINRVALGISPFVPKRHTPHFADPFAGVVTIERRLK
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RIQKELRTTAELRNVSAKWAWVESVIARGGPEVGMAAYRIYRNESIGAWKKALEEVGWRD
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC
EFESNTPVIELPPGQYAAKEVSAHAQGLAV
CCCCCCCEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SYWRTEIKPLLDAETGTLFKQAPIRVTLAFPNRYSVGMASLGYQVIYRMLNREEGVACE
CCCHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
RAFLPDDVEAFERSGQPLPTVESGRAAGDCELFALSVSFELDLTNIIRTLDVAGLRPLRE
HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHCCCHHHH
ERDDTDPIVMIGGPFTSSNPYPLTPFADVIVIGDGEQIVPVVAEALREASTREEFYDLID
CCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLPGIFLPARHVHEPTWATAPKELLPAYSQIVTPHSELSNMFLVEAQRGCPRPCTFCLAR
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHH
TMYGPNRNNQAQELLDVIPDWVEKVGLVGAALSDFPHTKYVGRVLTERGIKLGVSSIRAD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH
TVDEELAAILKAGGLRTFTVASDAPSERLRRWLKKGITTEDLIKTAQISRDLGFSGIKVY
HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
MMIGLGPETDDDITELISFTKDLAKINRVALGISPFVPKRHTPHFADPFAGVVTIERRLK
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RIQKELRTTAELRNVSAKWAWVESVIARGGPEVGMAAYRIYRNESIGAWKKALEEVGWRD
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC
EFESNTPVIELPPGQYAAKEVSAHAQGLAV
CCCCCCCEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]