Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985234

Identifier: 94985234

GI number: 94985234

Start: 1202034

End: 1202387

Strand: Reverse

Name: 94985234

Synonym: Dgeo_1132

Alternate gene names: NA

Gene position: 1202387-1202034 (Counterclockwise)

Preceding gene: 94985243

Following gene: 94985233

Centisome position: 48.73

GC content: 73.16

Gene sequence:

>354_bases
GTGTTTCTCGTGTCGTGGACCCGCCGCGTGCGCCTCCTGGCCGCGCTGCTGGCCCTGATCGCGGGGCTGGTCTACCCGGT
GCGGAATCTGCCCGACGTGTGGCTGTTGGGTGGGCCGCCACATTCGGCAGACCACTGCGGCGGCCCACCCGAGCACGGGT
CTTTTCCGAGCGCCGCCCATGACACCCATTGCCTGTTCTGTCTGACCGGGGCGTTTGCCGATGGGCCGCCGGCGCCGCTG
CGCGTGGCTCCTGGTGCGGATCCTCGGGCGGTGATTCGCCCGGCTGCGCCGCAAGTCCCGCACCCCCCGGTGGCCCACGC
GGATGCCCGCGCGCCACCCCACACGGCCGCCTGA

Upstream 100 bases:

>100_bases
TGTAACTCAACCCCGCCACCTGTGCCTTGGTGTGTTCTGGACACCAAAGGAAGGGTGAATGGGGCGATGTGTCCCTGCTC
GCCTCTCCTACACTGCGCCT

Downstream 100 bases:

>100_bases
AGTGCCCATACCCAACCGACGTTCCGCGTGGCGCCCTGTGCCGGGTGGCCCAATTCATTCCTCCAGGAGAACTGATGTCC
TTCCACCGTAGCCTTCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MFLVSWTRRVRLLAALLALIAGLVYPVRNLPDVWLLGGPPHSADHCGGPPEHGSFPSAAHDTHCLFCLTGAFADGPPAPL
RVAPGADPRAVIRPAAPQVPHPPVAHADARAPPHTAA

Sequences:

>Translated_117_residues
MFLVSWTRRVRLLAALLALIAGLVYPVRNLPDVWLLGGPPHSADHCGGPPEHGSFPSAAHDTHCLFCLTGAFADGPPAPL
RVAPGADPRAVIRPAAPQVPHPPVAHADARAPPHTAA
>Mature_117_residues
MFLVSWTRRVRLLAALLALIAGLVYPVRNLPDVWLLGGPPHSADHCGGPPEHGSFPSAAHDTHCLFCLTGAFADGPPAPL
RVAPGADPRAVIRPAAPQVPHPPVAHADARAPPHTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12185; Mature: 12185

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVSWTRRVRLLAALLALIAGLVYPVRNLPDVWLLGGPPHSADHCGGPPEHGSFPSAAH
CEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
DTHCLFCLTGAFADGPPAPLRVAPGADPRAVIRPAAPQVPHPPVAHADARAPPHTAA
CCEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFLVSWTRRVRLLAALLALIAGLVYPVRNLPDVWLLGGPPHSADHCGGPPEHGSFPSAAH
CEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
DTHCLFCLTGAFADGPPAPLRVAPGADPRAVIRPAAPQVPHPPVAHADARAPPHTAA
CCEEEEEEECCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA