| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is ywrD [H]
Identifier: 94985243
GI number: 94985243
Start: 1212264
End: 1213859
Strand: Reverse
Name: ywrD [H]
Synonym: Dgeo_1141
Alternate gene names: 94985243
Gene position: 1213859-1212264 (Counterclockwise)
Preceding gene: 94985244
Following gene: 94985234
Centisome position: 49.2
GC content: 70.11
Gene sequence:
>1596_bases GTGACCTACCAGCCCGAGACTCCAGTTATTCGGCAAGCGGTGTACGCGCAGCGCGGCATGGTTGCCACCAGCCAGCCCCT TGCCGCCCAAGCCGGGCTCAGCATCCTGCAGCAGGGCGGCAACGCCGTCGACGCGGCCATCGCCACCGCCGCCGCGCTGA CGGTCGTTGAACCCACCAGCAACGGGCTGGGCGGCGACCTCTTCGCCCTGGTGTGGGCAAGGGGCGAGCTGCACGGCCTG AATGCCAGCGGCGCCGCCCCCGCTGCCTTGACCCGCGACGTGTTGGCCGGCGGTGACATGCCCAGACATGGCTGGACCCC CGTCACCGTCCCCGGCGCGGTCCGCGGTTGGGCCGACCTGCACGCCCGCTTTGGCCGCCTCCCCTTCGCCGACGTCCTGC TCCCCGCCATCCGCTATGCCCGCGAGGGCTACCCCCTCTCGCCGGTCCTCGCCGCACACTGGACACGCGCCATCCGCAGC TACCGGGGCCTGCAGCTCCCCATCCTGGAGGAGTGGTTCCGGGTCTTCGCCCCAGACGGTTTCACCCCTGCCCCCGGGGC ACTCTGGCGCAGCGAAGACCACGCCCGCACCCTAGAGGCCATTGCCCGGACAGCAGGCGCGGACTTCTACGAGGGCAAGC TTGCCCAGCAGATCGACGCCCACGCCCGCGAGACGGGCGGTCTGCTTCGCGCCGCCGACCTCGCCGCCCACCGCTCCGAG TGGGTGAACCCCATCTACACCCGCTTCCTTGACCACCTCGTCTATGAGATCCCACCCAACGGGCAGGGCATCGCTGCACT GATCGCCCTGAACATCCTGGACGAACTCGACCTCCCCGACCGCCGCGACGATCCCCGGGGGCTGCACCTCCAGATCGAGG CGATGAAACGCGGCTTCCACGACGCCCACACCTTTGTCGGTGACCCGCGCCATGTGCCGGTGGATGTGGAAGGGCTCCTC TCCGCCGAAAACGCCGCCACCCACCGCACCTTCCTGGGTGAGCTGGCCCACGACCCCGCCACCCGCGCCCCCAGCAGTGG CGGCACCGTCTACCTCGCCACCGCCGACGGCGAGGGAGGAATGGTCAGCCTCATCCAGAGCAACTACATGGGCTTTGGCA GCGGCGTGGTCGTGCCCGGCACCGGCATCGCCCTCCACAACCGCGGCCACAACTTCCACCTCGACCCCGCCCACCCCAAC GCCCTCGCGCCCGGCAAACGGCCCTACCACACCATCATCCCCGGCTTCCTGTCACGCGCAGACGGCACCCCGCTCGGCCC CTTCGGGGTGATGGGCGGCTTCATGCAACCGCAGGGCCATGTTCAGGTCGTGCTGAACACCCTCCGCTACGGCTTGAATC CCCAGCAGGCCCTCGATGCCCCGCGCTGGCAGTGGCTCCAGGGCAAGGCTGTAGACCTTGAACCCGCCCTCGGCGCACAG TTGGCACGGGCCCTCGCCGCCCGTGGGCATGACGTGCGCCTCCAGCTCGACTCCAGCGCCTTTGGCCGCGGCCAGATCAT CTGGCGCAACCCCCACACCGGCGTGCTGGAAGGCGGCACAGAAAGCCGCACGGACGGACACATCGCCGTGTGGTAA
Upstream 100 bases:
>100_bases CCGAATATATACAAACCCCCCTGAGTTCTCCTCGAGGAAAGGGAATATATACAAAAAAAGCAAGAGGACACACCTCCTCA ACCGTACTAGCCTATCCCAC
Downstream 100 bases:
>100_bases AAAGCTCACCCCCCCACGTACGCCTCGCTCAGCGCCCATAGCCGCGCCGCTGCCCGGTCGTCGCGGGCCTGGGGCGCCTC CTTCGCCACCCGCTCGGCGC
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTYQPETPVIRQAVYAQRGMVATSQPLAAQAGLSILQQGGNAVDAAIATAAALTVVEPTSNGLGGDLFALVWARGELHGL NASGAAPAALTRDVLAGGDMPRHGWTPVTVPGAVRGWADLHARFGRLPFADVLLPAIRYAREGYPLSPVLAAHWTRAIRS YRGLQLPILEEWFRVFAPDGFTPAPGALWRSEDHARTLEAIARTAGADFYEGKLAQQIDAHARETGGLLRAADLAAHRSE WVNPIYTRFLDHLVYEIPPNGQGIAALIALNILDELDLPDRRDDPRGLHLQIEAMKRGFHDAHTFVGDPRHVPVDVEGLL SAENAATHRTFLGELAHDPATRAPSSGGTVYLATADGEGGMVSLIQSNYMGFGSGVVVPGTGIALHNRGHNFHLDPAHPN ALAPGKRPYHTIIPGFLSRADGTPLGPFGVMGGFMQPQGHVQVVLNTLRYGLNPQQALDAPRWQWLQGKAVDLEPALGAQ LARALAARGHDVRLQLDSSAFGRGQIIWRNPHTGVLEGGTESRTDGHIAVW
Sequences:
>Translated_531_residues MTYQPETPVIRQAVYAQRGMVATSQPLAAQAGLSILQQGGNAVDAAIATAAALTVVEPTSNGLGGDLFALVWARGELHGL NASGAAPAALTRDVLAGGDMPRHGWTPVTVPGAVRGWADLHARFGRLPFADVLLPAIRYAREGYPLSPVLAAHWTRAIRS YRGLQLPILEEWFRVFAPDGFTPAPGALWRSEDHARTLEAIARTAGADFYEGKLAQQIDAHARETGGLLRAADLAAHRSE WVNPIYTRFLDHLVYEIPPNGQGIAALIALNILDELDLPDRRDDPRGLHLQIEAMKRGFHDAHTFVGDPRHVPVDVEGLL SAENAATHRTFLGELAHDPATRAPSSGGTVYLATADGEGGMVSLIQSNYMGFGSGVVVPGTGIALHNRGHNFHLDPAHPN ALAPGKRPYHTIIPGFLSRADGTPLGPFGVMGGFMQPQGHVQVVLNTLRYGLNPQQALDAPRWQWLQGKAVDLEPALGAQ LARALAARGHDVRLQLDSSAFGRGQIIWRNPHTGVLEGGTESRTDGHIAVW >Mature_530_residues TYQPETPVIRQAVYAQRGMVATSQPLAAQAGLSILQQGGNAVDAAIATAAALTVVEPTSNGLGGDLFALVWARGELHGLN ASGAAPAALTRDVLAGGDMPRHGWTPVTVPGAVRGWADLHARFGRLPFADVLLPAIRYAREGYPLSPVLAAHWTRAIRSY RGLQLPILEEWFRVFAPDGFTPAPGALWRSEDHARTLEAIARTAGADFYEGKLAQQIDAHARETGGLLRAADLAAHRSEW VNPIYTRFLDHLVYEIPPNGQGIAALIALNILDELDLPDRRDDPRGLHLQIEAMKRGFHDAHTFVGDPRHVPVDVEGLLS AENAATHRTFLGELAHDPATRAPSSGGTVYLATADGEGGMVSLIQSNYMGFGSGVVVPGTGIALHNRGHNFHLDPAHPNA LAPGKRPYHTIIPGFLSRADGTPLGPFGVMGGFMQPQGHVQVVLNTLRYGLNPQQALDAPRWQWLQGKAVDLEPALGAQL ARALAARGHDVRLQLDSSAFGRGQIIWRNPHTGVLEGGTESRTDGHIAVW
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=521, Percent_Identity=27.831094049904, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI73915090, Length=521, Percent_Identity=27.831094049904, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI73915096, Length=521, Percent_Identity=27.831094049904, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI73915094, Length=521, Percent_Identity=27.831094049904, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI113429324, Length=529, Percent_Identity=27.2211720226843, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI113429326, Length=531, Percent_Identity=26.9303201506591, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI109148539, Length=507, Percent_Identity=30.1775147928994, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI153266885, Length=519, Percent_Identity=27.1676300578035, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI153266901, Length=520, Percent_Identity=27.5, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI153266907, Length=514, Percent_Identity=26.4591439688716, Blast_Score=112, Evalue=7e-25, Organism=Escherichia coli, GI1789856, Length=542, Percent_Identity=29.7047970479705, Blast_Score=201, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17506189, Length=513, Percent_Identity=27.8752436647173, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI72000294, Length=434, Percent_Identity=26.9585253456221, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI212646519, Length=482, Percent_Identity=25.9336099585062, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI193208245, Length=526, Percent_Identity=24.9049429657795, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI193208247, Length=504, Percent_Identity=25.1984126984127, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17542894, Length=526, Percent_Identity=23.384030418251, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323330, Length=523, Percent_Identity=21.6061185468451, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161077878, Length=513, Percent_Identity=27.4853801169591, Blast_Score=142, Evalue=7e-34, Organism=Drosophila melanogaster, GI24642670, Length=513, Percent_Identity=27.4853801169591, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI24642666, Length=513, Percent_Identity=27.4853801169591, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI45551474, Length=513, Percent_Identity=27.4853801169591, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI161077880, Length=513, Percent_Identity=27.4853801169591, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI161077496, Length=514, Percent_Identity=26.6536964980545, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI18859741, Length=511, Percent_Identity=26.4187866927593, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI18859893, Length=527, Percent_Identity=25.426944971537, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 56911; Mature: 56780
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYQPETPVIRQAVYAQRGMVATSQPLAAQAGLSILQQGGNAVDAAIATAAALTVVEPTS CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCC NGLGGDLFALVWARGELHGLNASGAAPAALTRDVLAGGDMPRHGWTPVTVPGAVRGWADL CCCCHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHH HARFGRLPFADVLLPAIRYAREGYPLSPVLAAHWTRAIRSYRGLQLPILEEWFRVFAPDG HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC FTPAPGALWRSEDHARTLEAIARTAGADFYEGKLAQQIDAHARETGGLLRAADLAAHRSE CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH WVNPIYTRFLDHLVYEIPPNGQGIAALIALNILDELDLPDRRDDPRGLHLQIEAMKRGFH HCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCH DAHTFVGDPRHVPVDVEGLLSAENAATHRTFLGELAHDPATRAPSSGGTVYLATADGEGG HHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC MVSLIQSNYMGFGSGVVVPGTGIALHNRGHNFHLDPAHPNALAPGKRPYHTIIPGFLSRA EEEEEHHCCCCCCCCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC DGTPLGPFGVMGGFMQPQGHVQVVLNTLRYGLNPQQALDAPRWQWLQGKAVDLEPALGAQ CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCCCCCHHHHHH LARALAARGHDVRLQLDSSAFGRGQIIWRNPHTGVLEGGTESRTDGHIAVW HHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEC >Mature Secondary Structure TYQPETPVIRQAVYAQRGMVATSQPLAAQAGLSILQQGGNAVDAAIATAAALTVVEPTS CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCC NGLGGDLFALVWARGELHGLNASGAAPAALTRDVLAGGDMPRHGWTPVTVPGAVRGWADL CCCCHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHH HARFGRLPFADVLLPAIRYAREGYPLSPVLAAHWTRAIRSYRGLQLPILEEWFRVFAPDG HHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC FTPAPGALWRSEDHARTLEAIARTAGADFYEGKLAQQIDAHARETGGLLRAADLAAHRSE CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH WVNPIYTRFLDHLVYEIPPNGQGIAALIALNILDELDLPDRRDDPRGLHLQIEAMKRGFH HCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCH DAHTFVGDPRHVPVDVEGLLSAENAATHRTFLGELAHDPATRAPSSGGTVYLATADGEGG HHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC MVSLIQSNYMGFGSGVVVPGTGIALHNRGHNFHLDPAHPNALAPGKRPYHTIIPGFLSRA EEEEEHHCCCCCCCCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC DGTPLGPFGVMGGFMQPQGHVQVVLNTLRYGLNPQQALDAPRWQWLQGKAVDLEPALGAQ CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCCCCCHHHHHH LARALAARGHDVRLQLDSSAFGRGQIIWRNPHTGVLEGGTESRTDGHIAVW HHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]