| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985184
Identifier: 94985184
GI number: 94985184
Start: 1149788
End: 1150669
Strand: Reverse
Name: 94985184
Synonym: Dgeo_1080
Alternate gene names: NA
Gene position: 1150669-1149788 (Counterclockwise)
Preceding gene: 94985185
Following gene: 94985181
Centisome position: 46.64
GC content: 67.46
Gene sequence:
>882_bases GTGACCGCTTCCTTGTTCGCAGTTGCCACAGACGGCGGCCTGGATGCCTTCGCAGAGCTGAAGAATGCTGTTCCGGTCGC GCCCTTCAGTCTGAACTTCGGCTCCAACACCTACCGGATGAACGAGATCACGCGCGAGTGGCTGTACCGCGAGTTGCAAA CCAACCCGCTGCACCCGACCTCCAGTCAGCCCACGCCGCAGGACTGGGCGGAGGCGTACCAGCAGGCAGGCGGGAGCGAA CTGCCCGTCCTGGCACTGACCATCAGCAGCGGACTTTCGGGGAGCATCAACGCAGCCGAGCAGGCGCGGGGGGTGGTCCC GGAAATACCGGTCACTCTCCACGACACACGCACCCTGAGTGCCGCACAGGCGTTTCAGGTTCACGCCGCGGTGACAGCGG CGGAGCGTGGCGAAACGCTAGAGACGGCACTGGACTGGGTGCGCCACACGGCGGCGGAAACCGAACTGTATTTCACAATC GAGACGCTGGAGTACCTGCGGCGGGGCGGGCGGATCGGACGGGTACAGGCTGCGCTGGGAGGGCTTTTGAACCTCAAGCC GGTAATCACGGTGGACCGGGCGACAGGTACCTACACGAACGTGGGCCGGGCCCGCAGCTACCGGGGGGCTATCGAGGCCA TCGCTGCCCAGGTCACCGCGCGGTACGGCAAGGGCACGCCGCTGCGGCTCGGCCTGCTGTACGGCAGCGTTCGCGAGGAT GCCAGCGCCCTGCTCGCGGCGATCCAGGCGCGTCATCCGGTTGTGTGGGCAGGCGCAACCGGCGTGAATCCGGTGCTCAA CGTTCATACCGGACCGCGGGCGGTGGGCGTGGCGGCCGCGCCGGGGAACTGGGTCTGGGAACGGGAGGGGGCAAGCGGGT AG
Upstream 100 bases:
>100_bases TGGCGGCACTTTACCGGGCAGCGGCGCACCGCGTCGGAGCAGAGGCCGATTACAGCGCCGCACTGAAACTGGTGGAGCAG CTGAACGGCGTGGAGATCGC
Downstream 100 bases:
>100_bases GCAGAGGGGGGGTTAGGCTGTTGCTGCAGATGTGGCTGCTTTGCCGCGATCAGACCATCGATCCGCTTTGTATATATTCG AGGCAGCGACGGGCGACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTASLFAVATDGGLDAFAELKNAVPVAPFSLNFGSNTYRMNEITREWLYRELQTNPLHPTSSQPTPQDWAEAYQQAGGSE LPVLALTISSGLSGSINAAEQARGVVPEIPVTLHDTRTLSAAQAFQVHAAVTAAERGETLETALDWVRHTAAETELYFTI ETLEYLRRGGRIGRVQAALGGLLNLKPVITVDRATGTYTNVGRARSYRGAIEAIAAQVTARYGKGTPLRLGLLYGSVRED ASALLAAIQARHPVVWAGATGVNPVLNVHTGPRAVGVAAAPGNWVWEREGASG
Sequences:
>Translated_293_residues MTASLFAVATDGGLDAFAELKNAVPVAPFSLNFGSNTYRMNEITREWLYRELQTNPLHPTSSQPTPQDWAEAYQQAGGSE LPVLALTISSGLSGSINAAEQARGVVPEIPVTLHDTRTLSAAQAFQVHAAVTAAERGETLETALDWVRHTAAETELYFTI ETLEYLRRGGRIGRVQAALGGLLNLKPVITVDRATGTYTNVGRARSYRGAIEAIAAQVTARYGKGTPLRLGLLYGSVRED ASALLAAIQARHPVVWAGATGVNPVLNVHTGPRAVGVAAAPGNWVWEREGASG >Mature_292_residues TASLFAVATDGGLDAFAELKNAVPVAPFSLNFGSNTYRMNEITREWLYRELQTNPLHPTSSQPTPQDWAEAYQQAGGSEL PVLALTISSGLSGSINAAEQARGVVPEIPVTLHDTRTLSAAQAFQVHAAVTAAERGETLETALDWVRHTAAETELYFTIE TLEYLRRGGRIGRVQAALGGLLNLKPVITVDRATGTYTNVGRARSYRGAIEAIAAQVTARYGKGTPLRLGLLYGSVREDA SALLAAIQARHPVVWAGATGVNPVLNVHTGPRAVGVAAAPGNWVWEREGASG
Specific function: Unknown
COG id: COG1307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DegV domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003797 [H]
Pfam domain/function: PF02645 DegV [H]
EC number: NA
Molecular weight: Translated: 31140; Mature: 31009
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLFAVATDGGLDAFAELKNAVPVAPFSLNFGSNTYRMNEITREWLYRELQTNPLHPT CCCEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCC SSQPTPQDWAEAYQQAGGSELPVLALTISSGLSGSINAAEQARGVVPEIPVTLHDTRTLS CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEECCCHHH AAQAFQVHAAVTAAERGETLETALDWVRHTAAETELYFTIETLEYLRRGGRIGRVQAALG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCEEHHHHHC GLLNLKPVITVDRATGTYTNVGRARSYRGAIEAIAAQVTARYGKGTPLRLGLLYGSVRED CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH ASALLAAIQARHPVVWAGATGVNPVLNVHTGPRAVGVAAAPGNWVWEREGASG HHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCC >Mature Secondary Structure TASLFAVATDGGLDAFAELKNAVPVAPFSLNFGSNTYRMNEITREWLYRELQTNPLHPT CCEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCC SSQPTPQDWAEAYQQAGGSELPVLALTISSGLSGSINAAEQARGVVPEIPVTLHDTRTLS CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEECCCHHH AAQAFQVHAAVTAAERGETLETALDWVRHTAAETELYFTIETLEYLRRGGRIGRVQAALG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCEEHHHHHC GLLNLKPVITVDRATGTYTNVGRARSYRGAIEAIAAQVTARYGKGTPLRLGLLYGSVRED CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH ASALLAAIQARHPVVWAGATGVNPVLNVHTGPRAVGVAAAPGNWVWEREGASG HHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]