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The map label for this gene is ylbK [H]

Identifier: 94985181

GI number: 94985181

Start: 1146559

End: 1147350

Strand: Reverse

Name: ylbK [H]

Synonym: Dgeo_1077

Alternate gene names: 94985181

Gene position: 1147350-1146559 (Counterclockwise)

Preceding gene: 94985184

Following gene: 94985180

Centisome position: 46.5

GC content: 68.18

Gene sequence:

>792_bases
ATGTCAGGTTTCGGGCTGGTGCTGGGGGGTGGGGGCGCGCGCGGGCTGGCGCACATCGGTGTTTGGCAGGTGCTGGAGGA
GGCTGGACTTCGTCCACACGTGTTGGCTGGCACCAGTATGGGCGGGCTGGTCGCGGCGTTGATCGCGGCGGGGACCAGCG
GCGAAGAACTGCGCCGAATCGCAGAGACGGTGTCGTGGCGGCGACTGCTGGACTGGCGACCTGGAGCTGGACTGCTCCGG
ACCAGCGCGTTCGAGGCGTGGCTGGCCGAACACCTTCCCCCGACCTTTGAGCAACTGCAGTGGCCCCTGGCGGTCACCGC
GACCGACGTGCTGACCGGGCGACTGGTCTACCTGTCACGCGGCAACTTGTATGCGGCGCTGCGCGCAACCAGCGCCTATC
CAGGAGCGATCGCCCCGGTCGCGCTGGATGACATGCTCCTGGCGGATGGAGGCATTCTGAATCAGGTGCCCGTGGATGCA
GCCTTCTTTCTGGGCGCGCAGAAGGTGGTGGCTGTGGACGCAACGTTCCCTGAACCCCTGGCACTGCCGGAGCGGCGGCG
CTGGCGCGGTGAGGGTCATCTGGGCGCCCTGCAGGCCTTGAGACGAGCGGTGGACATCATGCAGGCGCAGCTCACGGAAG
CGCGGCTGAGCCTCTACCGCCCGGATGTGTTGCTGCGGCCCCAGCTCGCCGGGGTAGAACTCCAGAGTTTCTGGCGTAGG
GCACAGGCCATCCGAGCGGGAGAAGCGGCGGCCCGAGCGCAGCTGCCGCAGCTGAGGGCGCTGCTTTCCTGA

Upstream 100 bases:

>100_bases
CCCCTCCCCCACCACCTGACCCGCCAGCGGCATTTCCTGCTCACGGTATCCCAGGGGCCGGGAGAAGTGATACCCCCAGT
GCCCCGCTTACAATTCCCCC

Downstream 100 bases:

>100_bases
CCCGCCGGCGGGGGAAGCACGCGGGGAAGGGCTGCCGTCCGCTATCCTGCGCGGCGGACAAGGAGCCGCATGACAAGACT
GAACAAACCCGCGCCGGGAC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSGFGLVLGGGGARGLAHIGVWQVLEEAGLRPHVLAGTSMGGLVAALIAAGTSGEELRRIAETVSWRRLLDWRPGAGLLR
TSAFEAWLAEHLPPTFEQLQWPLAVTATDVLTGRLVYLSRGNLYAALRATSAYPGAIAPVALDDMLLADGGILNQVPVDA
AFFLGAQKVVAVDATFPEPLALPERRRWRGEGHLGALQALRRAVDIMQAQLTEARLSLYRPDVLLRPQLAGVELQSFWRR
AQAIRAGEAAARAQLPQLRALLS

Sequences:

>Translated_263_residues
MSGFGLVLGGGGARGLAHIGVWQVLEEAGLRPHVLAGTSMGGLVAALIAAGTSGEELRRIAETVSWRRLLDWRPGAGLLR
TSAFEAWLAEHLPPTFEQLQWPLAVTATDVLTGRLVYLSRGNLYAALRATSAYPGAIAPVALDDMLLADGGILNQVPVDA
AFFLGAQKVVAVDATFPEPLALPERRRWRGEGHLGALQALRRAVDIMQAQLTEARLSLYRPDVLLRPQLAGVELQSFWRR
AQAIRAGEAAARAQLPQLRALLS
>Mature_262_residues
SGFGLVLGGGGARGLAHIGVWQVLEEAGLRPHVLAGTSMGGLVAALIAAGTSGEELRRIAETVSWRRLLDWRPGAGLLRT
SAFEAWLAEHLPPTFEQLQWPLAVTATDVLTGRLVYLSRGNLYAALRATSAYPGAIAPVALDDMLLADGGILNQVPVDAA
FFLGAQKVVAVDATFPEPLALPERRRWRGEGHLGALQALRRAVDIMQAQLTEARLSLYRPDVLLRPQLAGVELQSFWRRA
QAIRAGEAAARAQLPQLRALLS

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI260656041, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI260656039, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI260656037, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI116256487, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI148727290, Length=187, Percent_Identity=31.5508021390374, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI148727335, Length=187, Percent_Identity=31.5508021390374, Blast_Score=78, Evalue=6e-15,
Organism=Escherichia coli, GI226510936, Length=294, Percent_Identity=31.9727891156463, Blast_Score=108, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6323581, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 28230; Mature: 28099

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFGLVLGGGGARGLAHIGVWQVLEEAGLRPHVLAGTSMGGLVAALIAAGTSGEELRRI
CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHH
AETVSWRRLLDWRPGAGLLRTSAFEAWLAEHLPPTFEQLQWPLAVTATDVLTGRLVYLSR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHEEHHHHHHCEEEEEEC
GNLYAALRATSAYPGAIAPVALDDMLLADGGILNQVPVDAAFFLGAQKVVAVDATFPEPL
CCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCC
ALPERRRWRGEGHLGALQALRRAVDIMQAQLTEARLSLYRPDVLLRPQLAGVELQSFWRR
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHH
AQAIRAGEAAARAQLPQLRALLS
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGFGLVLGGGGARGLAHIGVWQVLEEAGLRPHVLAGTSMGGLVAALIAAGTSGEELRRI
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHH
AETVSWRRLLDWRPGAGLLRTSAFEAWLAEHLPPTFEQLQWPLAVTATDVLTGRLVYLSR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHEEHHHHHHCEEEEEEC
GNLYAALRATSAYPGAIAPVALDDMLLADGGILNQVPVDAAFFLGAQKVVAVDATFPEPL
CCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCC
ALPERRRWRGEGHLGALQALRRAVDIMQAQLTEARLSLYRPDVLLRPQLAGVELQSFWRR
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHH
AQAIRAGEAAARAQLPQLRALLS
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]