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The map label for this gene is ahpF [C]

Identifier: 94985118

GI number: 94985118

Start: 1086200

End: 1087195

Strand: Reverse

Name: ahpF [C]

Synonym: Dgeo_1013

Alternate gene names: 94985118

Gene position: 1087195-1086200 (Counterclockwise)

Preceding gene: 94985119

Following gene: 94985117

Centisome position: 44.07

GC content: 71.79

Gene sequence:

>996_bases
ATGCAGAGCAAGCAGGCCCCAGATACGGAGATTCTGGTGATTGGCGGCGGCCCGGCCGGGCTACATGCCGCCTTCTATGC
TGCTTGGCGCGGCCTGAGCGTGCGGGTGCTGGAGGCGCGCGGCGAGGTCGGCGGGCAACTGCTGGCGCTCTATCCCGACA
AGGTGATCTACGACGTGCCGGGCGTGCCACAGGTGCGAGCGGCAGAACTGGTGGCGGCCCTGTGCGCCCAGCTGGGGCCG
CTCGACGTGGACCTCCGGACCGGCGAGGTGGCCCGCACCCTGGAACCAGACGGCACGGGCGGCTGGGTGATCGGCACAGC
AGGAGCGCGGCATCGGGCGCGGGCGGTCATCCTGGCAGCGGGCATGGGCGCGCTGCTGCCGCGTGAGGTACGAGTACCGG
GCGCCGACACCCACCCGGACGTGCGGGCGGACCTCCCCGATCCTGCCGGGTTCGCCGGGCGGCGGGTGCTCGTCGTGGGG
GGCGTGCCCCAAGCGACACGGGCCGCAGTGGAACTGTTGGAAGCGGGGGCGACCGTCACGCTCACGCACCGCCGAGCAGG
GTTCCGGGGCGATCCGCTGACCCTCGCCCGGCTAGAGACAGCGCGGCAGGCGAGCCAGATGCGTCTGCTGGCGCCCGCCG
TGCTGTCCCGGCTCACCCCGCAGGGCGCCGAGCTGGTGGTGGAGGGCGCGCCGCTGGCGGTCCGGGCCGACACGGTCCTG
ATTCTCAACGGCTACCTGCCTGACCTTTCTCCCCTGCAGGCCTGGCCCCTTGCCTGGGACGGCGAGTACGTGCCAGATGG
TCCCAGCGGGCAGACGGTCTTGCCCGGCGTCTATGTGATCGGTGACCTGGCCCGCTCCGGCGGGGACTTCAAGCTGCTCT
CGCTGGCCTTTGCGCAGGCAGCGGTTGCTGCAAACCACGCCGCCCACCATGTCCGGCCCGAGTTGAAGATGCGACCGGGG
CACAGCAGCGAGCGCGGAGGATATCCGGTGCGTTAG

Upstream 100 bases:

>100_bases
CAGCGGGAGATGCAGCAGGCCGAAGGCTGAAGTCGGCCGGGGCAGAGCGCAGCGGGCAGGGAGAAGCGCCGAGCCGCTGC
GCTCTGCCATACTCGCCCCC

Downstream 100 bases:

>100_bases
GGGGTGCGGCCCGCTGGGGCCTGTCGGCCCTCTGCCCTCCCCGGCTAGAATGCCGCCTATGGCTTTTCTGTCCGTGCTGC
TCCTGGGGGTCGCTTTTGTG

Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQSKQAPDTEILVIGGGPAGLHAAFYAAWRGLSVRVLEARGEVGGQLLALYPDKVIYDVPGVPQVRAAELVAALCAQLGP
LDVDLRTGEVARTLEPDGTGGWVIGTAGARHRARAVILAAGMGALLPREVRVPGADTHPDVRADLPDPAGFAGRRVLVVG
GVPQATRAAVELLEAGATVTLTHRRAGFRGDPLTLARLETARQASQMRLLAPAVLSRLTPQGAELVVEGAPLAVRADTVL
ILNGYLPDLSPLQAWPLAWDGEYVPDGPSGQTVLPGVYVIGDLARSGGDFKLLSLAFAQAAVAANHAAHHVRPELKMRPG
HSSERGGYPVR

Sequences:

>Translated_331_residues
MQSKQAPDTEILVIGGGPAGLHAAFYAAWRGLSVRVLEARGEVGGQLLALYPDKVIYDVPGVPQVRAAELVAALCAQLGP
LDVDLRTGEVARTLEPDGTGGWVIGTAGARHRARAVILAAGMGALLPREVRVPGADTHPDVRADLPDPAGFAGRRVLVVG
GVPQATRAAVELLEAGATVTLTHRRAGFRGDPLTLARLETARQASQMRLLAPAVLSRLTPQGAELVVEGAPLAVRADTVL
ILNGYLPDLSPLQAWPLAWDGEYVPDGPSGQTVLPGVYVIGDLARSGGDFKLLSLAFAQAAVAANHAAHHVRPELKMRPG
HSSERGGYPVR
>Mature_331_residues
MQSKQAPDTEILVIGGGPAGLHAAFYAAWRGLSVRVLEARGEVGGQLLALYPDKVIYDVPGVPQVRAAELVAALCAQLGP
LDVDLRTGEVARTLEPDGTGGWVIGTAGARHRARAVILAAGMGALLPREVRVPGADTHPDVRADLPDPAGFAGRRVLVVG
GVPQATRAAVELLEAGATVTLTHRRAGFRGDPLTLARLETARQASQMRLLAPAVLSRLTPQGAELVVEGAPLAVRADTVL
ILNGYLPDLSPLQAWPLAWDGEYVPDGPSGQTVLPGVYVIGDLARSGGDFKLLSLAFAQAAVAANHAAHHVRPELKMRPG
HSSERGGYPVR

Specific function: Serves To Protect The Cell Against DNA Damage By Alkyl Hydroperoxides. It Can Use Either NADH Or NADPH As Electron Donor For Direct Reduction Of Redox Dyes Or Of Alkyl Hydroperoxides When Combined With The Ahpc Protein. [C]

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FENR_DEIGD (Q1IZM1)

Other databases:

- EMBL:   CP000359
- RefSeq:   YP_604482.1
- ProteinModelPortal:   Q1IZM1
- SMR:   Q1IZM1
- STRING:   Q1IZM1
- GeneID:   4058149
- GenomeReviews:   CP000359_GR
- KEGG:   dge:Dgeo_1013
- NMPDR:   fig|68909.1.peg.2001
- eggNOG:   COG0492
- HOGENOM:   HBG669726
- OMA:   FQVFELG
- ProtClustDB:   CLSK2468002
- BioCyc:   DGEO319795:DGEO_1013-MONOMER
- HAMAP:   MF_01685
- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR000103
- PRINTS:   PR00368
- PRINTS:   PR00469

Pfam domain/function: PF07992 Pyr_redox_2

EC number: =1.18.1.2

Molecular weight: Translated: 34589; Mature: 34589

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: BINDING 38-38 BINDING 46-46 BINDING 51-51 BINDING 91-91 BINDING 125-125 BINDING 282-282 BINDING 323-323

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKQAPDTEILVIGGGPAGLHAAFYAAWRGLSVRVLEARGEVGGQLLALYPDKVIYDVP
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCEEEEECC
GVPQVRAAELVAALCAQLGPLDVDLRTGEVARTLEPDGTGGWVIGTAGARHRARAVILAA
CCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEEECCCCCCHHEEEEEEC
GMGALLPREVRVPGADTHPDVRADLPDPAGFAGRRVLVVGGVPQATRAAVELLEAGATVT
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
LTHRRAGFRGDPLTLARLETARQASQMRLLAPAVLSRLTPQGAELVVEGAPLAVRADTVL
EEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCEEE
ILNGYLPDLSPLQAWPLAWDGEYVPDGPSGQTVLPGVYVIGDLARSGGDFKLLSLAFAQA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEHHHHCCCCEEHHHHHHHHH
AVAANHAAHHVRPELKMRPGHSSERGGYPVR
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQSKQAPDTEILVIGGGPAGLHAAFYAAWRGLSVRVLEARGEVGGQLLALYPDKVIYDVP
CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCEEEEECC
GVPQVRAAELVAALCAQLGPLDVDLRTGEVARTLEPDGTGGWVIGTAGARHRARAVILAA
CCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEEECCCCCCHHEEEEEEC
GMGALLPREVRVPGADTHPDVRADLPDPAGFAGRRVLVVGGVPQATRAAVELLEAGATVT
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEE
LTHRRAGFRGDPLTLARLETARQASQMRLLAPAVLSRLTPQGAELVVEGAPLAVRADTVL
EEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCEEE
ILNGYLPDLSPLQAWPLAWDGEYVPDGPSGQTVLPGVYVIGDLARSGGDFKLLSLAFAQA
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHEEEHHHHCCCCEEHHHHHHHHH
AVAANHAAHHVRPELKMRPGHSSERGGYPVR
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA