| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is fprA [H]
Identifier: 94985119
GI number: 94985119
Start: 1087266
End: 1088660
Strand: Reverse
Name: fprA [H]
Synonym: Dgeo_1014
Alternate gene names: 94985119
Gene position: 1088660-1087266 (Counterclockwise)
Preceding gene: 94985120
Following gene: 94985118
Centisome position: 44.13
GC content: 66.59
Gene sequence:
>1395_bases ATGACGACCTCCTCTGTGCAGCACTTCACCCCCGAACGGCCCCTGCGCGTTGCCGTGATCGGCAGCGGTCCCAGCGGCGT CTTCGCCACCGAGGCCCTGCTCAAGCAGACTGACATCCCCGTTCAGGTCGATGTGTTTGACCGCCTTCCTACCCCCTACG GCCTGGTGCGCTACGGCGTCGCCCCTGACCACCTCACCATCAAGAGCGTGACCAAGGGTTTTGAGAAGACCCTCTCCGAC CCGCGCGTCCGCTTCCTGGGCAACGTCGAGTTTGGGACCGATCTGACGTATGACGAGGCCCGCCGCCACTACGACGCCAT CATCTATACCGTGGGGGCCAGCAGTGACCGCCGCCTGGGCATTCCCGGCGAAGATCTGCGAGGCTCCATGAGCGCAACCG AGTTCGTGGCTTGGTACAACGGCCACCCCGACGCCGCCGCCCGCGAGATGGTGCTGAATGCGACCGGTGTCGCGGTGGTC GGCGTGGGCAACGTGGCGCTGGATGTGAGCCGCATTCTGGCCAAGACCGTAGAGGAATTGCGGGAGAGTGATATCGCCGC CCATGCATTGACGGCGCTGGAACAAAGCCCCGTGCGGGACGTGTGGGTGCTGGGCCGCCGCGGACCGCTGCAGGCCAAGT TCACCACCAAGGAGCTGCGCGAGTTTGGGGAGCTGGAGGGGGCAGACCCCGTCGTGAACCCCGAGGAGATCGCGGTGAGT GCGGCGGAAGAGGCCCAGGTCACCGACAATGTGGTGAAGAAGAATCTGGAAGTGCTGCGTGACTTTGCCGGGCGCACGCC GGAAGGCAAGCCCCGGCGCGTGCATCTGCGGTTCCTGGTCTCGCCGGTCGAGATTCTGGACGACGGTCAGGGGCACGTGG GCGGGCTGAAGGTGGAAAGAAACCGCCTGGATGAGAACGGCAACGCGGTGGGGACGGGCGAGTATGAGGTGCTGCCCGTC CAGATGGTGCTGCGCTCGGTGGGCTACAAGGGTGTGGGGCTGCCCGGTGTCCCCTTCGATGAACAGCGCGGTGTGATTCC CAACACGGAAGGCCGGGTGGAAGGCCGGACGGGCGAGTACACCGCCGGCTGGATCAAGCGCGGCCCTAGCGGCGTGATCG GCACCAACCGCAAGGATGCAGTCGACACCGTGGCGCAGCTGCTGGCCGATGCGCAAGCCGGCGCGCTCCCCCACGCAAGT CAGCCCAGCCGCGAGGCGGTGGATACGCTGCTGAGACAAAAGGGCGTGGAGGTGTACACCTTCGCGGACTGGCAGGCGCT TGACGCCCATGAAGTCGCCCAGGGCCGGGCGCAGGGACGCCCCCGCGCCAAGGTCGTCCACAAGCACGAGATGTTGCAGC ACCGCCAGCGGGAGATGCAGCAGGCCGAAGGCTGA
Upstream 100 bases:
>100_bases TTGTTGTGGGCAGTTATGGTGGACGCGGCGACCGAATCCTGAGCGCATTCGTCCAGATTCAAACGACCAGGTTTCCGGTC CTGCCCGCTAGACTCGCCTT
Downstream 100 bases:
>100_bases AGTCGGCCGGGGCAGAGCGCAGCGGGCAGGGAGAAGCGCCGAGCCGCTGCGCTCTGCCATACTCGCCCCCATGCAGAGCA AGCAGGCCCCAGATACGGAG
Product: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: NFR [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTTSSVQHFTPERPLRVAVIGSGPSGVFATEALLKQTDIPVQVDVFDRLPTPYGLVRYGVAPDHLTIKSVTKGFEKTLSD PRVRFLGNVEFGTDLTYDEARRHYDAIIYTVGASSDRRLGIPGEDLRGSMSATEFVAWYNGHPDAAAREMVLNATGVAVV GVGNVALDVSRILAKTVEELRESDIAAHALTALEQSPVRDVWVLGRRGPLQAKFTTKELREFGELEGADPVVNPEEIAVS AAEEAQVTDNVVKKNLEVLRDFAGRTPEGKPRRVHLRFLVSPVEILDDGQGHVGGLKVERNRLDENGNAVGTGEYEVLPV QMVLRSVGYKGVGLPGVPFDEQRGVIPNTEGRVEGRTGEYTAGWIKRGPSGVIGTNRKDAVDTVAQLLADAQAGALPHAS QPSREAVDTLLRQKGVEVYTFADWQALDAHEVAQGRAQGRPRAKVVHKHEMLQHRQREMQQAEG
Sequences:
>Translated_464_residues MTTSSVQHFTPERPLRVAVIGSGPSGVFATEALLKQTDIPVQVDVFDRLPTPYGLVRYGVAPDHLTIKSVTKGFEKTLSD PRVRFLGNVEFGTDLTYDEARRHYDAIIYTVGASSDRRLGIPGEDLRGSMSATEFVAWYNGHPDAAAREMVLNATGVAVV GVGNVALDVSRILAKTVEELRESDIAAHALTALEQSPVRDVWVLGRRGPLQAKFTTKELREFGELEGADPVVNPEEIAVS AAEEAQVTDNVVKKNLEVLRDFAGRTPEGKPRRVHLRFLVSPVEILDDGQGHVGGLKVERNRLDENGNAVGTGEYEVLPV QMVLRSVGYKGVGLPGVPFDEQRGVIPNTEGRVEGRTGEYTAGWIKRGPSGVIGTNRKDAVDTVAQLLADAQAGALPHAS QPSREAVDTLLRQKGVEVYTFADWQALDAHEVAQGRAQGRPRAKVVHKHEMLQHRQREMQQAEG >Mature_463_residues TTSSVQHFTPERPLRVAVIGSGPSGVFATEALLKQTDIPVQVDVFDRLPTPYGLVRYGVAPDHLTIKSVTKGFEKTLSDP RVRFLGNVEFGTDLTYDEARRHYDAIIYTVGASSDRRLGIPGEDLRGSMSATEFVAWYNGHPDAAAREMVLNATGVAVVG VGNVALDVSRILAKTVEELRESDIAAHALTALEQSPVRDVWVLGRRGPLQAKFTTKELREFGELEGADPVVNPEEIAVSA AEEAQVTDNVVKKNLEVLRDFAGRTPEGKPRRVHLRFLVSPVEILDDGQGHVGGLKVERNRLDENGNAVGTGEYEVLPVQ MVLRSVGYKGVGLPGVPFDEQRGVIPNTEGRVEGRTGEYTAGWIKRGPSGVIGTNRKDAVDTVAQLLADAQAGALPHASQ PSREAVDTLLRQKGVEVYTFADWQALDAHEVAQGRAQGRPRAKVVHKHEMLQHRQREMQQAEG
Specific function: May serve as electron transfer protein and supply electrons to P450 systems [H]
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI111118981, Length=466, Percent_Identity=42.7038626609442, Blast_Score=343, Evalue=3e-94, Organism=Homo sapiens, GI111118983, Length=472, Percent_Identity=42.1610169491525, Blast_Score=337, Evalue=2e-92, Organism=Escherichia coli, GI87082180, Length=164, Percent_Identity=31.0975609756098, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788811, Length=350, Percent_Identity=25.1428571428571, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17543860, Length=452, Percent_Identity=34.2920353982301, Blast_Score=244, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6320584, Length=498, Percent_Identity=30.5220883534137, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI17137178, Length=460, Percent_Identity=37.8260869565217, Blast_Score=268, Evalue=6e-72, Organism=Drosophila melanogaster, GI24665547, Length=156, Percent_Identity=31.4102564102564, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24665543, Length=156, Percent_Identity=31.4102564102564, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574881, Length=156, Percent_Identity=31.4102564102564, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24665539, Length=156, Percent_Identity=31.4102564102564, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR021163 - InterPro: IPR016040 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 50561; Mature: 50429
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSVQHFTPERPLRVAVIGSGPSGVFATEALLKQTDIPVQVDVFDRLPTPYGLVRYGV CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCHHHEEECC APDHLTIKSVTKGFEKTLSDPRVRFLGNVEFGTDLTYDEARRHYDAIIYTVGASSDRRLG CCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEECCCCCCCCC IPGEDLRGSMSATEFVAWYNGHPDAAAREMVLNATGVAVVGVGNVALDVSRILAKTVEEL CCCHHHCCCCCHHHEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH RESDIAAHALTALEQSPVRDVWVLGRRGPLQAKFTTKELREFGELEGADPVVNPEEIAVS HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHEEE AAEEAQVTDNVVKKNLEVLRDFAGRTPEGKPRRVHLRFLVSPVEILDDGQGHVGGLKVER CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHCCCCCCCCCEEEEH NRLDENGNAVGTGEYEVLPVQMVLRSVGYKGVGLPGVPFDEQRGVIPNTEGRVEGRTGEY HHCCCCCCEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAGWIKRGPSGVIGTNRKDAVDTVAQLLADAQAGALPHASQPSREAVDTLLRQKGVEVYT CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEE FADWQALDAHEVAQGRAQGRPRAKVVHKHEMLQHRQREMQQAEG ECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTSSVQHFTPERPLRVAVIGSGPSGVFATEALLKQTDIPVQVDVFDRLPTPYGLVRYGV CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCHHHEEECC APDHLTIKSVTKGFEKTLSDPRVRFLGNVEFGTDLTYDEARRHYDAIIYTVGASSDRRLG CCCCEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHEEEEEEEECCCCCCCCC IPGEDLRGSMSATEFVAWYNGHPDAAAREMVLNATGVAVVGVGNVALDVSRILAKTVEEL CCCHHHCCCCCHHHEEEEECCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH RESDIAAHALTALEQSPVRDVWVLGRRGPLQAKFTTKELREFGELEGADPVVNPEEIAVS HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHEEE AAEEAQVTDNVVKKNLEVLRDFAGRTPEGKPRRVHLRFLVSPVEILDDGQGHVGGLKVER CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHCCCCCCCCCEEEEH NRLDENGNAVGTGEYEVLPVQMVLRSVGYKGVGLPGVPFDEQRGVIPNTEGRVEGRTGEY HHCCCCCCEEECCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAGWIKRGPSGVIGTNRKDAVDTVAQLLADAQAGALPHASQPSREAVDTLLRQKGVEVYT CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEE FADWQALDAHEVAQGRAQGRPRAKVVHKHEMLQHRQREMQQAEG ECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036; 12071965; 12614197; 12102623 [H]