| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985102
Identifier: 94985102
GI number: 94985102
Start: 1070454
End: 1071254
Strand: Reverse
Name: 94985102
Synonym: Dgeo_0997
Alternate gene names: NA
Gene position: 1071254-1070454 (Counterclockwise)
Preceding gene: 94985104
Following gene: 94985101
Centisome position: 43.42
GC content: 68.54
Gene sequence:
>801_bases ATGTGTCAAGTTTTGAAGGCAGTTCGCGTGGTGGGCCTGGGGCTTACCGGGTTGCTCGGTGGGGCAGGTGCACAGGGCAC GACCACGAACACACCCACACCTGCGGCTCCGACCAAGAGTACGCCGGTTGCCGCCAACACCGCGCGCACGGCCAGCAGCG TCGCCGTCGAGATCAGCGGCACGGTGAAGGGACAGATCGTGGCCTGTCCCAAGGCCCTCAAGGTGAGCGCGGCGGCGGTC TGTCTCTACGTACAGAACACGCCCTCCAGCCTCCGCCCGCTTGTACGCGGCAAGCTCGGCGCCCGCGCGCTGGGCGACTG GAAGACTTCCGGCCAAGCCAGCTCGCTGCTGGTGTCCGACACACCGAACGGCCCGCTCGGCGCCTTTGTGCTGCTCGCCC CACTCACCGCGAACGAATCGCTGGTGGTCGTCGACGCGGTGCAGGCGCCCGCCGCCTCCGCTGCACCGCGGCCCGCCACG CCCGCCGGGGTCGTGAAGGGTCAGCCCTACGTCCTGGGCCGCGACCTGATCGGTGTGGTGAACGTCACGTCGCTGGGCGG CGGCAAGTTTCGCCTCAACAGCGGCGGCAGTCTGCCGCTTACGGTCACGGTCGGACAGAAAAGCGCGCAGCTTGGCAGCG GCACAGTAGAGCTGCCGCTGGCCCCTGCCAGTGACGGCCAGAACCTCATCTTCCCGCTGGCCGGTTTGCGCTCGCTGGGC TGCACCTTCACCCCCGCCGGAACGAACATGACGGTTGCCTGCGGATCTGCCAGCGTGGGTCTGCGGCCGATCGTGTTCTA G
Upstream 100 bases:
>100_bases CGCGGGTCTCTCGGTTCGCATTCGGCATCAGGTGAGGAACCTGACGGCTTCATGTGCCGCTCAAAGTGGACGCTCATGCG CGGCAGGTACCATACAGCCC
Downstream 100 bases:
>100_bases TGCCGAGCCGCTGGCAGACGGGGAAGGACCTCGCCCAAGGTGCTTTCCCGCGTCCTTGTTCTGGGTCCTTGGGTGCCTTG GCCCCTTGAGCTGGCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MCQVLKAVRVVGLGLTGLLGGAGAQGTTTNTPTPAAPTKSTPVAANTARTASSVAVEISGTVKGQIVACPKALKVSAAAV CLYVQNTPSSLRPLVRGKLGARALGDWKTSGQASSLLVSDTPNGPLGAFVLLAPLTANESLVVVDAVQAPAASAAPRPAT PAGVVKGQPYVLGRDLIGVVNVTSLGGGKFRLNSGGSLPLTVTVGQKSAQLGSGTVELPLAPASDGQNLIFPLAGLRSLG CTFTPAGTNMTVACGSASVGLRPIVF
Sequences:
>Translated_266_residues MCQVLKAVRVVGLGLTGLLGGAGAQGTTTNTPTPAAPTKSTPVAANTARTASSVAVEISGTVKGQIVACPKALKVSAAAV CLYVQNTPSSLRPLVRGKLGARALGDWKTSGQASSLLVSDTPNGPLGAFVLLAPLTANESLVVVDAVQAPAASAAPRPAT PAGVVKGQPYVLGRDLIGVVNVTSLGGGKFRLNSGGSLPLTVTVGQKSAQLGSGTVELPLAPASDGQNLIFPLAGLRSLG CTFTPAGTNMTVACGSASVGLRPIVF >Mature_266_residues MCQVLKAVRVVGLGLTGLLGGAGAQGTTTNTPTPAAPTKSTPVAANTARTASSVAVEISGTVKGQIVACPKALKVSAAAV CLYVQNTPSSLRPLVRGKLGARALGDWKTSGQASSLLVSDTPNGPLGAFVLLAPLTANESLVVVDAVQAPAASAAPRPAT PAGVVKGQPYVLGRDLIGVVNVTSLGGGKFRLNSGGSLPLTVTVGQKSAQLGSGTVELPLAPASDGQNLIFPLAGLRSLG CTFTPAGTNMTVACGSASVGLRPIVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26243; Mature: 26243
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQVLKAVRVVGLGLTGLLGGAGAQGTTTNTPTPAAPTKSTPVAANTARTASSVAVEISG CHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC TVKGQIVACPKALKVSAAAVCLYVQNTPSSLRPLVRGKLGARALGDWKTSGQASSLLVSD CCCEEEEECCHHHEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC TPNGPLGAFVLLAPLTANESLVVVDAVQAPAASAAPRPATPAGVVKGQPYVLGRDLIGVV CCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCEEECCCEEEEE NVTSLGGGKFRLNSGGSLPLTVTVGQKSAQLGSGTVELPLAPASDGQNLIFPLAGLRSLG EEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHCC CTFTPAGTNMTVACGSASVGLRPIVF CEECCCCCEEEEEECCCCCCCEEECC >Mature Secondary Structure MCQVLKAVRVVGLGLTGLLGGAGAQGTTTNTPTPAAPTKSTPVAANTARTASSVAVEISG CHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC TVKGQIVACPKALKVSAAAVCLYVQNTPSSLRPLVRGKLGARALGDWKTSGQASSLLVSD CCCEEEEECCHHHEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEC TPNGPLGAFVLLAPLTANESLVVVDAVQAPAASAAPRPATPAGVVKGQPYVLGRDLIGVV CCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCEEECCCEEEEE NVTSLGGGKFRLNSGGSLPLTVTVGQKSAQLGSGTVELPLAPASDGQNLIFPLAGLRSLG EEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHCC CTFTPAGTNMTVACGSASVGLRPIVF CEECCCCCEEEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA