Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985104

Identifier: 94985104

GI number: 94985104

Start: 1072506

End: 1073723

Strand: Reverse

Name: 94985104

Synonym: Dgeo_0999

Alternate gene names: NA

Gene position: 1073723-1072506 (Counterclockwise)

Preceding gene: 94985111

Following gene: 94985102

Centisome position: 43.52

GC content: 60.26

Gene sequence:

>1218_bases
ATGAGTAAGGTCATGATTATTGGCGCGGGTGGCGTGGGCAACGTCGTGGCAAAGAAGTGCGCGCAAAACGACAGCGTGTT
CACCGAGGTGCTGCTTGCCAGCCGCACCGTCAGCAAGTGCGACAAGATCGTCGCGGAGATTCGGGAACACTTCCCCCAGA
GCAAGACGCAGTTCACAACGGCGGCGGTGGACGCCGACAACGTCCCAGAGCTGGTGGCTCTCATCCGTTCCTTCGGGCCG
GAACTGGTGATCAACGTGGCTCTCCCCTATCAGGATCTCACGATCATGGACGCCTGCCTGGAAACGGGCGTGCATTACCT
CGACACCGCGAACTACGAACCGCGAGACGTGGCCAAGTTTGAGTATTCCTGGCAGTGGGCCTACCGTGAGCGCTTTGAGA
AAGCCGGGCTGATGGCGCTCCTGGGCTGCGGCTTCGACCCCGGCGCGACCAACGTGTTTACCGCCCACCACGCCAAACAT
CACTTTTCAGAAATCCATTACCTCGACATCGTCGACTGCAACAACGGCAGTCACGGCAAGGCCTTTGCCACCAACTTCAA
CCCAGAAATTAACCTCCGCGAGATCACCGCAAATGGGCGCTACTGGGAAAACGGGCAGTGGGTCGAGACGGCGCCGCTGG
AGATCAGCCAGGATATCTACTACCCCAATGTCGCCACCCGCAAGAGCTTCGTGCTGTACCACGAGGAACTCGAGTCGCTG
GTGATCAACTTTCCCACCATCCGGCGCGCCCGCTTTTGGATGACCTTTGGCGAGCAGTATCTCAAGTACCTCAGCGTGCT
GGAATCGGTCGGCATGACCTCCATCGAGCCGATCAACTTCCGAGGGATGGAGATCGCGCCCATCGAGTTTCTCAAGGCCG
TGCTGCCTGCTCCCGAATCGCTGGCCGCCGACTACACCGGCAAGACCTGCATCGGCGTGCAGGCGCGCGGCATCGGCAAG
GACGGCAAGGAGAAGGTGCATTTCGTCTATAACATCTGTGATCACGCAGAAGCGTACCGCGAGGTGCAGGCGCAGGCGAT
CAGCTACACGACCGGCGTGCCCGCCATGATCGGCGCGATGCTGATGCTGCAGGGCGTGTGGATGAAACCCGGCGTGTACA
ACGTCGAGGAATTCGACCCCGATCCCTTCATCGCCGCGATGAACACCTGGGGTCTGCCGGTCGACGAGTTGACGGGCATT
CAGCTCGTGCTGGACTGA

Upstream 100 bases:

>100_bases
CAGTGTTGCCTCCCACCACGCCCCACCACGCCCAGGCCGCGCCCTGGAGAAGGGGGAGGGAGGAGGGCAGGGCGCGAGAA
GCAGGGTACACTGGCCCCCG

Downstream 100 bases:

>100_bases
GCGCGGCTGACTCAGGCCCCGGAAGCGTTCCCGGCTCCGGGGTCTTTTCTTGGCCGAGTTCTTGCCGAGTTCTTGGCTGA
GGGCAGAGCTTCCTTACGCC

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSKVMIIGAGGVGNVVAKKCAQNDSVFTEVLLASRTVSKCDKIVAEIREHFPQSKTQFTTAAVDADNVPELVALIRSFGP
ELVINVALPYQDLTIMDACLETGVHYLDTANYEPRDVAKFEYSWQWAYRERFEKAGLMALLGCGFDPGATNVFTAHHAKH
HFSEIHYLDIVDCNNGSHGKAFATNFNPEINLREITANGRYWENGQWVETAPLEISQDIYYPNVATRKSFVLYHEELESL
VINFPTIRRARFWMTFGEQYLKYLSVLESVGMTSIEPINFRGMEIAPIEFLKAVLPAPESLAADYTGKTCIGVQARGIGK
DGKEKVHFVYNICDHAEAYREVQAQAISYTTGVPAMIGAMLMLQGVWMKPGVYNVEEFDPDPFIAAMNTWGLPVDELTGI
QLVLD

Sequences:

>Translated_405_residues
MSKVMIIGAGGVGNVVAKKCAQNDSVFTEVLLASRTVSKCDKIVAEIREHFPQSKTQFTTAAVDADNVPELVALIRSFGP
ELVINVALPYQDLTIMDACLETGVHYLDTANYEPRDVAKFEYSWQWAYRERFEKAGLMALLGCGFDPGATNVFTAHHAKH
HFSEIHYLDIVDCNNGSHGKAFATNFNPEINLREITANGRYWENGQWVETAPLEISQDIYYPNVATRKSFVLYHEELESL
VINFPTIRRARFWMTFGEQYLKYLSVLESVGMTSIEPINFRGMEIAPIEFLKAVLPAPESLAADYTGKTCIGVQARGIGK
DGKEKVHFVYNICDHAEAYREVQAQAISYTTGVPAMIGAMLMLQGVWMKPGVYNVEEFDPDPFIAAMNTWGLPVDELTGI
QLVLD
>Mature_404_residues
SKVMIIGAGGVGNVVAKKCAQNDSVFTEVLLASRTVSKCDKIVAEIREHFPQSKTQFTTAAVDADNVPELVALIRSFGPE
LVINVALPYQDLTIMDACLETGVHYLDTANYEPRDVAKFEYSWQWAYRERFEKAGLMALLGCGFDPGATNVFTAHHAKHH
FSEIHYLDIVDCNNGSHGKAFATNFNPEINLREITANGRYWENGQWVETAPLEISQDIYYPNVATRKSFVLYHEELESLV
INFPTIRRARFWMTFGEQYLKYLSVLESVGMTSIEPINFRGMEIAPIEFLKAVLPAPESLAADYTGKTCIGVQARGIGKD
GKEKVHFVYNICDHAEAYREVQAQAISYTTGVPAMIGAMLMLQGVWMKPGVYNVEEFDPDPFIAAMNTWGLPVDELTGIQ
LVLD

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45245; Mature: 45114

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVMIIGAGGVGNVVAKKCAQNDSVFTEVLLASRTVSKCDKIVAEIREHFPQSKTQFTT
CCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AAVDADNVPELVALIRSFGPELVINVALPYQDLTIMDACLETGVHYLDTANYEPRDVAKF
EECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE
EYSWQWAYRERFEKAGLMALLGCGFDPGATNVFTAHHAKHHFSEIHYLDIVDCNNGSHGK
EEEEEHHHHHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHCCEEEEEEEECCCCCCCC
AFATNFNPEINLREITANGRYWENGQWVETAPLEISQDIYYPNVATRKSFVLYHEELESL
EEEECCCCCEEEEEEECCCEEECCCCEEEECCCEECCCCCCCCCCCCCHHEEEHHHHHHH
VINFPTIRRARFWMTFGEQYLKYLSVLESVGMTSIEPINFRGMEIAPIEFLKAVLPAPES
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCCCHH
LAADYTGKTCIGVQARGIGKDGKEKVHFVYNICDHAEAYREVQAQAISYTTGVPAMIGAM
HHCCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LMLQGVWMKPGVYNVEEFDPDPFIAAMNTWGLPVDELTGIQLVLD
HHHCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHCCCEEEEEC
>Mature Secondary Structure 
SKVMIIGAGGVGNVVAKKCAQNDSVFTEVLLASRTVSKCDKIVAEIREHFPQSKTQFTT
CEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
AAVDADNVPELVALIRSFGPELVINVALPYQDLTIMDACLETGVHYLDTANYEPRDVAKF
EECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE
EYSWQWAYRERFEKAGLMALLGCGFDPGATNVFTAHHAKHHFSEIHYLDIVDCNNGSHGK
EEEEEHHHHHHHHHCCCCEEEECCCCCCCCCEEEHHHHHHHHCCEEEEEEEECCCCCCCC
AFATNFNPEINLREITANGRYWENGQWVETAPLEISQDIYYPNVATRKSFVLYHEELESL
EEEECCCCCEEEEEEECCCEEECCCCEEEECCCEECCCCCCCCCCCCCHHEEEHHHHHHH
VINFPTIRRARFWMTFGEQYLKYLSVLESVGMTSIEPINFRGMEIAPIEFLKAVLPAPES
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCCCHH
LAADYTGKTCIGVQARGIGKDGKEKVHFVYNICDHAEAYREVQAQAISYTTGVPAMIGAM
HHCCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LMLQGVWMKPGVYNVEEFDPDPFIAAMNTWGLPVDELTGIQLVLD
HHHCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA