| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985066
Identifier: 94985066
GI number: 94985066
Start: 1028450
End: 1028962
Strand: Reverse
Name: 94985066
Synonym: Dgeo_0961
Alternate gene names: NA
Gene position: 1028962-1028450 (Counterclockwise)
Preceding gene: 94985067
Following gene: 94985065
Centisome position: 41.71
GC content: 68.03
Gene sequence:
>513_bases GTGACCGGCTTTGACCCCTTTGCGGCAGCGCTGAACAACATGACCGCTGCCAAGACGCCGAGCGCGGGTGCGGAGCAGCG CCCCCTCACCCGCGCCCAGGCTGACCTGAAGCAGGCGGTGGAACTGCTGGAGGCGATGGCGGGAGCCAGCGAAGGCGTCA AGCGCAATTACCTGCGCCGCGTGAAGGACTTCCCCGCGCTCGTGATGCAAGTGGGCCTGGCGCAGGCGGTGGCCTTTAGC GTGGACAAGGCGGGCAAGAATGACGACCGGGGCGGGGCACACCGCCTGCTGCTCAACCATCTGTACGCGGTGTGGCGGCC AGAGACCCAGGGCCAACCCGTGCAGCTCGATGATGGCAAGGGCCGCGAACACGTGCTGAAGTTTCTGCAAGACCTCTCCA CCGCCGAGTACCGCCACCTCACCCGCCGCACCCTGGCGGCCTGGGTGTACTTCCGCCGCCTGAGCGAGAGCGTCCTGGAT CCCGACGGCACCCTGGGCGAGGAGCGCGAATGA
Upstream 100 bases:
>100_bases TGCGGCCCCAGGACGTGACCTTTGCGCCGCCCTCATCGCTGCAACTCGGCGGGAAGGGCAGCGTGGGGCGCGGCCTGCTG AGCGTGCAGGTGGTGGTCCG
Downstream 100 bases:
>100_bases GGCTGCCGGGACAGTTTCCCGTCAGGGGAGCCAGCCACGCCGGGCACGCGCTGACCCGGCGGGTGGCCGTGAAGCAGAGC AAGACCAGCGAGGGCCGCAG
Product: CRISPR-associated Cmr5 family protein
Products: NA
Alternate protein names: CRISPR-Associated Cmr5 Family Protein
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTGFDPFAAALNNMTAAKTPSAGAEQRPLTRAQADLKQAVELLEAMAGASEGVKRNYLRRVKDFPALVMQVGLAQAVAFS VDKAGKNDDRGGAHRLLLNHLYAVWRPETQGQPVQLDDGKGREHVLKFLQDLSTAEYRHLTRRTLAAWVYFRRLSESVLD PDGTLGEERE
Sequences:
>Translated_170_residues MTGFDPFAAALNNMTAAKTPSAGAEQRPLTRAQADLKQAVELLEAMAGASEGVKRNYLRRVKDFPALVMQVGLAQAVAFS VDKAGKNDDRGGAHRLLLNHLYAVWRPETQGQPVQLDDGKGREHVLKFLQDLSTAEYRHLTRRTLAAWVYFRRLSESVLD PDGTLGEERE >Mature_169_residues TGFDPFAAALNNMTAAKTPSAGAEQRPLTRAQADLKQAVELLEAMAGASEGVKRNYLRRVKDFPALVMQVGLAQAVAFSV DKAGKNDDRGGAHRLLLNHLYAVWRPETQGQPVQLDDGKGREHVLKFLQDLSTAEYRHLTRRTLAAWVYFRRLSESVLDP DGTLGEERE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18833; Mature: 18701
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFDPFAAALNNMTAAKTPSAGAEQRPLTRAQADLKQAVELLEAMAGASEGVKRNYLRR CCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VKDFPALVMQVGLAQAVAFSVDKAGKNDDRGGAHRLLLNHLYAVWRPETQGQPVQLDDGK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GREHVLKFLQDLSTAEYRHLTRRTLAAWVYFRRLSESVLDPDGTLGEERE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TGFDPFAAALNNMTAAKTPSAGAEQRPLTRAQADLKQAVELLEAMAGASEGVKRNYLRR CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VKDFPALVMQVGLAQAVAFSVDKAGKNDDRGGAHRLLLNHLYAVWRPETQGQPVQLDDGK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCC GREHVLKFLQDLSTAEYRHLTRRTLAAWVYFRRLSESVLDPDGTLGEERE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA