Click here to switch to the map view.

The map label for this gene is 94985067

Identifier: 94985067

GI number: 94985067

Start: 1028959

End: 1029753

Strand: Reverse

Name: 94985067

Synonym: Dgeo_0962

Alternate gene names: NA

Gene position: 1029753-1028959 (Counterclockwise)

Preceding gene: 94985068

Following gene: 94985066

Centisome position: 41.74

GC content: 70.31

Gene sequence:

>795_bases
ATGAACGCAAATGCAGAACTGTTGATGTGGCAGGCCCTCACCCCGGTGCACAGCGGCACCGGCCAAAGCAGCGCGGGCGT
GATTGACCTGCCCATCGCCCGCGAGGGGGCGACCGGTTTCCCGATGCTGCCCGGAAGTTCCATCAAGGGCGTGCTGCGGC
AGGGCCGCGAGGATGAGGAGGCCAAGCGGCTGTTCGGCTCGCTCGACGCCGCCGGGCGGCTCACCTTCACCGATGCCCGC
TTGCTGTGCCTGCCGGTGCGCTCGTACCGGGGCACCTTCGCCTACGTGACCTGCCCGCTCGTGCTTTCCCGTCTGCGGCG
CGACCTGGCGGCGCTGGGGCACCCGCTGGCGCTGCCAGAAGTCCCGGAAGTCAAAGAGAACACCGCCCAGGTCGCCGGGG
ACACGCTGATGCACGGCGGGCAGGTGCTGCTCGAAGACCTGGACCTTCAGGCCGAAGAGACGGCCTCCGCGCGGGCGTGG
GCCGAGGCCTTGGCAGAACTCAGCGGCCTGGGCGACGAGCTGCGCGAGCGCTTCGCCCTCCTGAGCGATGACGAGTTCGG
CTTCCTCGCCGAGACCGCCACCGAGGTGACGGCCCACATCCGCCTGGACGCCGAGACCAAGACGGTCGCGGGCGGGGCGC
TGTGGTACGAGGAAGCCCTGCCCGCCGCCAGTCTGCTCACCAGTTTCCTGCTGCGGCCCCAGGACGTGACCTTTGCGCCG
CCCTCATCGCTGCAACTCGGCGGGAAGGGCAGCGTGGGGCGCGGCCTGCTGAGCGTGCAGGTGGTGGTCCGGTGA

Upstream 100 bases:

>100_bases
ATCGCCAGAAGCTGCTGGAAGCCTGGCTCAAGCCCCTCAGCGACGACCAAGAGGACCAGCGCGACGGCTTCGGCTGCGCG
CTGTGGGGAGTGTGGAACTG

Downstream 100 bases:

>100_bases
CCGGCTTTGACCCCTTTGCGGCAGCGCTGAACAACATGACCGCTGCCAAGACGCCGAGCGCGGGTGCGGAGCAGCGCCCC
CTCACCCGCGCCCAGGCTGA

Product: CRISPR-associated RAMP Cmr4 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; Cmr4 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr4 Family Protein; CRISPR-Associated Ramp Protein Cmr4 Family; Crispr-Associated Ramp Protein Cmr4 Family; CRISPR-Associated RAMP Protein; Cmr Crispr-Associated Ramp Protein Cmr4 Family

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNANAELLMWQALTPVHSGTGQSSAGVIDLPIAREGATGFPMLPGSSIKGVLRQGREDEEAKRLFGSLDAAGRLTFTDAR
LLCLPVRSYRGTFAYVTCPLVLSRLRRDLAALGHPLALPEVPEVKENTAQVAGDTLMHGGQVLLEDLDLQAEETASARAW
AEALAELSGLGDELRERFALLSDDEFGFLAETATEVTAHIRLDAETKTVAGGALWYEEALPAASLLTSFLLRPQDVTFAP
PSSLQLGGKGSVGRGLLSVQVVVR

Sequences:

>Translated_264_residues
MNANAELLMWQALTPVHSGTGQSSAGVIDLPIAREGATGFPMLPGSSIKGVLRQGREDEEAKRLFGSLDAAGRLTFTDAR
LLCLPVRSYRGTFAYVTCPLVLSRLRRDLAALGHPLALPEVPEVKENTAQVAGDTLMHGGQVLLEDLDLQAEETASARAW
AEALAELSGLGDELRERFALLSDDEFGFLAETATEVTAHIRLDAETKTVAGGALWYEEALPAASLLTSFLLRPQDVTFAP
PSSLQLGGKGSVGRGLLSVQVVVR
>Mature_264_residues
MNANAELLMWQALTPVHSGTGQSSAGVIDLPIAREGATGFPMLPGSSIKGVLRQGREDEEAKRLFGSLDAAGRLTFTDAR
LLCLPVRSYRGTFAYVTCPLVLSRLRRDLAALGHPLALPEVPEVKENTAQVAGDTLMHGGQVLLEDLDLQAEETASARAW
AEALAELSGLGDELRERFALLSDDEFGFLAETATEVTAHIRLDAETKTVAGGALWYEEALPAASLLTSFLLRPQDVTFAP
PSSLQLGGKGSVGRGLLSVQVVVR

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28120; Mature: 28120

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANAELLMWQALTPVHSGTGQSSAGVIDLPIAREGATGFPMLPGSSIKGVLRQGREDEE
CCCCCCEEEEEHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHH
AKRLFGSLDAAGRLTFTDARLLCLPVRSYRGTFAYVTCPLVLSRLRRDLAALGHPLALPE
HHHHHHCCCCCCEEEEECCEEEEEEHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
VPEVKENTAQVAGDTLMHGGQVLLEDLDLQAEETASARAWAEALAELSGLGDELRERFAL
CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSDDEFGFLAETATEVTAHIRLDAETKTVAGGALWYEEALPAASLLTSFLLRPQDVTFAP
CCCCCCCHHHHHHHHEEEEEEECCCCCEECCCHHHHHHHCCHHHHHHHHHCCCCCCEECC
PSSLQLGGKGSVGRGLLSVQVVVR
CCCCEECCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNANAELLMWQALTPVHSGTGQSSAGVIDLPIAREGATGFPMLPGSSIKGVLRQGREDEE
CCCCCCEEEEEHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHH
AKRLFGSLDAAGRLTFTDARLLCLPVRSYRGTFAYVTCPLVLSRLRRDLAALGHPLALPE
HHHHHHCCCCCCEEEEECCEEEEEEHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
VPEVKENTAQVAGDTLMHGGQVLLEDLDLQAEETASARAWAEALAELSGLGDELRERFAL
CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSDDEFGFLAETATEVTAHIRLDAETKTVAGGALWYEEALPAASLLTSFLLRPQDVTFAP
CCCCCCCHHHHHHHHEEEEEEECCCCCEECCCHHHHHHHCCHHHHHHHHHCCCCCCEECC
PSSLQLGGKGSVGRGLLSVQVVVR
CCCCEECCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA