| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985034
Identifier: 94985034
GI number: 94985034
Start: 991611
End: 992252
Strand: Reverse
Name: 94985034
Synonym: Dgeo_0927
Alternate gene names: NA
Gene position: 992252-991611 (Counterclockwise)
Preceding gene: 94985035
Following gene: 94985033
Centisome position: 40.22
GC content: 66.2
Gene sequence:
>642_bases ATGAACCTCATCAAATCCAAACAGCGTGTGGCCGACCACGGCGAGGTCTTTACCCCGCCCTGGTTGGTGGAGGCCATGCT CGACCTCGTCGGGGGCGAAACCGAGCGCATCGACTCGCGCTTTCTGGAGCCGGCCTGCGGCAGCGGCAACTTCCTGGTGG CCGTGCTGCGCCGCAAGCTGGCCGCCGTCGAGGTGAAGTACGGCACGTCTAACTTTGAAAAACGCCACTACGCCCTGCTG GCGCTGATGTGTCTGTATGGCATCGAGCTGCTCGCCGACAACGTGGCCGAGTGCCGGGCCAACCTGCAAGAAATCCTGGC CGAGTACCTGGGGCTAGACGAAGACGACGACCTCTACCGCGCCGCCTCTTATGTGCTCGCGCAGAACCTGGTGCACGGGG ACGCCCTCAGGATGCAGACGCACGGCGGTCAGGCCATCATCTTTGCCGAGTGGGGCTACCTGGGCCGGGGCCGTTTTCAG CGCCGCGACTTCCGCCTCGACACCCTCGCCCTGTCGTCCACCTTCAGCGCCGAGGGGTCGCTGTTTGCCGGGCTGGGCAA GCACGAGGTCTTCACCCCCACCCGCACCTACCCCCCCATGACCATCCGCGACCTCGCCGCCGCCGGGGAGGAGAGCGCGT GA
Upstream 100 bases:
>100_bases AGCCAAAGCTGAGCGCCTGAAAAGGTACTCAGAATTGCGGTGGAGTCCAGACGCAAGCCCCCGCCTTTAGGCGCGGGGTC ATGACCCCCTCAGGAGAACC
Downstream 100 bases:
>100_bases CCATCCCTACCCAGGCCAAGTTCACCCTGCGGGGCCGCAACCCCGACGTGCTGAGCTGCATCGCCAACCTCTCCAACGAC GAGGTCTTCACCCCGCCGGA
Product: type III restriction system methylase
Products: NA
Alternate protein names: Methylase; DNA Methyltransferase; Type II Restriction- System Modification Subunit
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNLIKSKQRVADHGEVFTPPWLVEAMLDLVGGETERIDSRFLEPACGSGNFLVAVLRRKLAAVEVKYGTSNFEKRHYALL ALMCLYGIELLADNVAECRANLQEILAEYLGLDEDDDLYRAASYVLAQNLVHGDALRMQTHGGQAIIFAEWGYLGRGRFQ RRDFRLDTLALSSTFSAEGSLFAGLGKHEVFTPTRTYPPMTIRDLAAAGEESA
Sequences:
>Translated_213_residues MNLIKSKQRVADHGEVFTPPWLVEAMLDLVGGETERIDSRFLEPACGSGNFLVAVLRRKLAAVEVKYGTSNFEKRHYALL ALMCLYGIELLADNVAECRANLQEILAEYLGLDEDDDLYRAASYVLAQNLVHGDALRMQTHGGQAIIFAEWGYLGRGRFQ RRDFRLDTLALSSTFSAEGSLFAGLGKHEVFTPTRTYPPMTIRDLAAAGEESA >Mature_213_residues MNLIKSKQRVADHGEVFTPPWLVEAMLDLVGGETERIDSRFLEPACGSGNFLVAVLRRKLAAVEVKYGTSNFEKRHYALL ALMCLYGIELLADNVAECRANLQEILAEYLGLDEDDDLYRAASYVLAQNLVHGDALRMQTHGGQAIIFAEWGYLGRGRFQ RRDFRLDTLALSSTFSAEGSLFAGLGKHEVFTPTRTYPPMTIRDLAAAGEESA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23648; Mature: 23648
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIKSKQRVADHGEVFTPPWLVEAMLDLVGGETERIDSRFLEPACGSGNFLVAVLRRKL CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH AAVEVKYGTSNFEKRHYALLALMCLYGIELLADNVAECRANLQEILAEYLGLDEDDDLYR HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AASYVLAQNLVHGDALRMQTHGGQAIIFAEWGYLGRGRFQRRDFRLDTLALSSTFSAEGS HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCCCCC LFAGLGKHEVFTPTRTYPPMTIRDLAAAGEESA EEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MNLIKSKQRVADHGEVFTPPWLVEAMLDLVGGETERIDSRFLEPACGSGNFLVAVLRRKL CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH AAVEVKYGTSNFEKRHYALLALMCLYGIELLADNVAECRANLQEILAEYLGLDEDDDLYR HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AASYVLAQNLVHGDALRMQTHGGQAIIFAEWGYLGRGRFQRRDFRLDTLALSSTFSAEGS HHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHCCCCCCCC LFAGLGKHEVFTPTRTYPPMTIRDLAAAGEESA EEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA