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The map label for this gene is ybjT [H]

Identifier: 94985005

GI number: 94985005

Start: 957170

End: 958099

Strand: Reverse

Name: ybjT [H]

Synonym: Dgeo_0898

Alternate gene names: 94985005

Gene position: 958099-957170 (Counterclockwise)

Preceding gene: 94985030

Following gene: 94985004

Centisome position: 38.83

GC content: 69.14

Gene sequence:

>930_bases
ATGTCAGCCACTGCCCGCAGCACAGCTCCTGCTCGCAGCATTCGCGTCCTCGTGACGGGCGCGACCGGATTTGTTGGTCA
GGCCTTGGTGCGAGAACTCGTGAGCCGGGGCCATACGGTCTTCGCCGGATCACGCTCAGGCGGGGCATTGCCCGGCGCTA
CCGGTCTGCGGCTGGACGTGACGGATCCCGGCAGCGTGCTGCGAGCGGTGGGTGAGGCGGATCCCGAAGCCGTGGTGCAT
CTGGTGGGCATCATCCAGGAGGAAGGCACGCAGACCTTTAGGCGCGTGCATGTGGAGGGCACCCGCAACGTGCTCGCCGC
CACGCCCCGTCAGGCCCGCTACCTGCACATGAGCGCCCTGGGCGCAGACGAGGCCAGCGCGAGCCGTTACAGCGCGAGCA
AGGGCGAGGCCGAGCGGCTGGTGCGGGAGAGCGGCCTGGCATGGACCATCTTCCGGCCCAGCCTGATCTTCGGGGTGGGC
GACGATTTCTTCGGGCGGGTGCTGCGCGAACTCGTCACCGCCGCACCCATCGTGCCGCAGATCGGGGACGGCCACTTTCC
CTTCCGTCCGGTCAGCGTGGAGGACGTCGCGCTGGCCTTCGCCGGGGCACTGGAAAGGCCAGAGACGGCCGGGCACACCT
ACGCGCTGACCGGCCCGGAGGAATTCACCTTCCGCGCGCTGCTCGAGGAGGAGCAAGCAGCGCTGGGGCAGCGGCGGCCC
ATCGTGCCGGTGCCGCTCGCACTGATGAATCTGGCGGTGCCGCTGATGCAGCTCCTGCCGCATCCACCCATCACCCGCGA
CCAGTACCTGATGCTGAAAGCGGGCAACACTGCGCCGAACGAACCGGCCCGAACGGTCTTCGGCCTGCCGATGCACCGCC
TGCGAGAGCGGTTGCCGGAGATCCTGAGGCCGTCGGGGCCTGCCCACTGA

Upstream 100 bases:

>100_bases
CGGACCCGCCCACCGAACGTGCGCTGTGTGGCTTAGGGCCGGTGGGGAAAGCCGAGTGCATGCTTACGGTCCTGGCCCCC
GACCTGTGCGCCAATAGGGT

Downstream 100 bases:

>100_bases
TCCGGGAGCGCCTTGAGGCCCGAGCCTCTCCGGGAGGGCAGCTGCTCTTGCGCTTCGCCCCCGAGCGCTTGTCCTGACGC
ACTGCGCTGGGTGGTTGCGC

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSATARSTAPARSIRVLVTGATGFVGQALVRELVSRGHTVFAGSRSGGALPGATGLRLDVTDPGSVLRAVGEADPEAVVH
LVGIIQEEGTQTFRRVHVEGTRNVLAATPRQARYLHMSALGADEASASRYSASKGEAERLVRESGLAWTIFRPSLIFGVG
DDFFGRVLRELVTAAPIVPQIGDGHFPFRPVSVEDVALAFAGALERPETAGHTYALTGPEEFTFRALLEEEQAALGQRRP
IVPVPLALMNLAVPLMQLLPHPPITRDQYLMLKAGNTAPNEPARTVFGLPMHRLRERLPEILRPSGPAH

Sequences:

>Translated_309_residues
MSATARSTAPARSIRVLVTGATGFVGQALVRELVSRGHTVFAGSRSGGALPGATGLRLDVTDPGSVLRAVGEADPEAVVH
LVGIIQEEGTQTFRRVHVEGTRNVLAATPRQARYLHMSALGADEASASRYSASKGEAERLVRESGLAWTIFRPSLIFGVG
DDFFGRVLRELVTAAPIVPQIGDGHFPFRPVSVEDVALAFAGALERPETAGHTYALTGPEEFTFRALLEEEQAALGQRRP
IVPVPLALMNLAVPLMQLLPHPPITRDQYLMLKAGNTAPNEPARTVFGLPMHRLRERLPEILRPSGPAH
>Mature_308_residues
SATARSTAPARSIRVLVTGATGFVGQALVRELVSRGHTVFAGSRSGGALPGATGLRLDVTDPGSVLRAVGEADPEAVVHL
VGIIQEEGTQTFRRVHVEGTRNVLAATPRQARYLHMSALGADEASASRYSASKGEAERLVRESGLAWTIFRPSLIFGVGD
DFFGRVLRELVTAAPIVPQIGDGHFPFRPVSVEDVALAFAGALERPETAGHTYALTGPEEFTFRALLEEEQAALGQRRPI
VPVPLALMNLAVPLMQLLPHPPITRDQYLMLKAGNTAPNEPARTVFGLPMHRLRERLPEILRPSGPAH

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=302, Percent_Identity=26.8211920529801, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081793, Length=258, Percent_Identity=24.8062015503876, Blast_Score=75, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17556106, Length=235, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24667554, Length=252, Percent_Identity=28.968253968254, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33145; Mature: 33014

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATARSTAPARSIRVLVTGATGFVGQALVRELVSRGHTVFAGSRSGGALPGATGLRLDV
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEE
TDPGSVLRAVGEADPEAVVHLVGIIQEEGTQTFRRVHVEGTRNVLAATPRQARYLHMSAL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCHHHEEEHHHC
GADEASASRYSASKGEAERLVRESGLAWTIFRPSLIFGVGDDFFGRVLRELVTAAPIVPQ
CCCCHHHHHHCCCCHHHHHHHHHCCCEEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCC
IGDGHFPFRPVSVEDVALAFAGALERPETAGHTYALTGPEEFTFRALLEEEQAALGQRRP
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
IVPVPLALMNLAVPLMQLLPHPPITRDQYLMLKAGNTAPNEPARTVFGLPMHRLRERLPE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHH
ILRPSGPAH
HHCCCCCCC
>Mature Secondary Structure 
SATARSTAPARSIRVLVTGATGFVGQALVRELVSRGHTVFAGSRSGGALPGATGLRLDV
CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEE
TDPGSVLRAVGEADPEAVVHLVGIIQEEGTQTFRRVHVEGTRNVLAATPRQARYLHMSAL
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCHHHEEEHHHC
GADEASASRYSASKGEAERLVRESGLAWTIFRPSLIFGVGDDFFGRVLRELVTAAPIVPQ
CCCCHHHHHHCCCCHHHHHHHHHCCCEEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCC
IGDGHFPFRPVSVEDVALAFAGALERPETAGHTYALTGPEEFTFRALLEEEQAALGQRRP
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
IVPVPLALMNLAVPLMQLLPHPPITRDQYLMLKAGNTAPNEPARTVFGLPMHRLRERLPE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHH
ILRPSGPAH
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]