| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984978
Identifier: 94984978
GI number: 94984978
Start: 931558
End: 932670
Strand: Reverse
Name: 94984978
Synonym: Dgeo_0871
Alternate gene names: NA
Gene position: 932670-931558 (Counterclockwise)
Preceding gene: 94984979
Following gene: 94984976
Centisome position: 37.8
GC content: 68.91
Gene sequence:
>1113_bases ATGACCACCGACTTTCAGCACCTCATCTCCGGCTCGCGCCTGCGGCTGCGGGGCAAATCGGCCTTTTTCGCCACCCTGCT GCTGCACGCGGAGTTCGTGCCCTCGCGCGAGGTGCTGGGCGCCGGAACGGACGGCGAGCGGGTCTACGTGAACCCCGAAG TCGCGGCCAGCCTGCCACCCGATGTGCTCGACGGCCTCTTGCTGCATGAGGTGTTGCATGCGGCGCTCGCGCATGTCGAG CGGCGGGGACCGCGCGAGAAAAAACGCTGGAACCGAGCCGCTGACCTGATCGTGAACGGAATGGTGGCTGCGGCCGGGCT GCCTACACCCCCCCAAAGCCCGCGCGACGAGCATCTGGAAAAGCTCAGCGTGGAGGAGGTCTACAGCGCGCTGGAGAGGC AGGACGGGCAGGAAGGGGATGAATCCGGGGAGGATCTGCTCGACGGCCCCCCTTCCGACGCGCCACCGAAGGGCAGCCGG TCTGGGCAGAATGCCGCACGGCGCTGGCAACAGGCGCTCGCGCAAGCGCGCAGCGTGGACGCGATGAGCGGCGGCAAAGG GGACGATCCGCTGGGCGCGCACCGCGAACTCGCCCGCCTCTCCCCCGCCCGGCTCGACTGGCGCGCACAACTCTGGCGCT TCCTGGCGCGGACGCCAGTGGATTTTGGGGGCTTCGACCGCCGCTTTGTGGGCCGCGGCCTCTACCTGGAGGCGCTGGAC GACGAGAGCCTCACCGCCCTGATCGCAGTGGACACCTCCGGCAGCGTGGATGACCAGGCCGTGCGGGCGCTGGTGGGCGA GGTGCAGGGCGTGCTGGGGGCCTATCCGCACGTGAAGGCCGTCCTGTATTACGCTGATACCGAGGCGTACGGTCCCTTTG AGCTGCGCCCCGGCGACGCGATCCCGGCCCCAGTAGGCGGCGGCGGCACTGATTTCCGGCCCGTCTTCCAGTTGGCCGAC ACCCACGAACCCGACGTGCTGATCTACCTGACGGACGGATACGGAGATTTCCCGGAGAAAGCGCCCGGCATGCCGACGCT CTGGGTGGTGCCTCCCGGCGGGCTGGAGGACGAGGGCTTTCCCTTTGGGGACGTGCTGCGGTTGGAAGAGTAG
Upstream 100 bases:
>100_bases TGAAGATGTCAGAGGACAGGGATCAGCGCTGGGTGAGGCGTGGGCAGGGTCTTGCCCACTCCCTGCGCCGGACTCGCAGG ACTGCAACGCAGAGGCGCAT
Downstream 100 bases:
>100_bases GGCGATAAGAGGGCAGTGGAGGTCGAGGTCTCGCCGTCGCGACTGGCCTGCCCGCATCCTTCCGCCTGAGCCCCCCGTGA TCGACGCGGTGGCCGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTTDFQHLISGSRLRLRGKSAFFATLLLHAEFVPSREVLGAGTDGERVYVNPEVAASLPPDVLDGLLLHEVLHAALAHVE RRGPREKKRWNRAADLIVNGMVAAAGLPTPPQSPRDEHLEKLSVEEVYSALERQDGQEGDESGEDLLDGPPSDAPPKGSR SGQNAARRWQQALAQARSVDAMSGGKGDDPLGAHRELARLSPARLDWRAQLWRFLARTPVDFGGFDRRFVGRGLYLEALD DESLTALIAVDTSGSVDDQAVRALVGEVQGVLGAYPHVKAVLYYADTEAYGPFELRPGDAIPAPVGGGGTDFRPVFQLAD THEPDVLIYLTDGYGDFPEKAPGMPTLWVVPPGGLEDEGFPFGDVLRLEE
Sequences:
>Translated_370_residues MTTDFQHLISGSRLRLRGKSAFFATLLLHAEFVPSREVLGAGTDGERVYVNPEVAASLPPDVLDGLLLHEVLHAALAHVE RRGPREKKRWNRAADLIVNGMVAAAGLPTPPQSPRDEHLEKLSVEEVYSALERQDGQEGDESGEDLLDGPPSDAPPKGSR SGQNAARRWQQALAQARSVDAMSGGKGDDPLGAHRELARLSPARLDWRAQLWRFLARTPVDFGGFDRRFVGRGLYLEALD DESLTALIAVDTSGSVDDQAVRALVGEVQGVLGAYPHVKAVLYYADTEAYGPFELRPGDAIPAPVGGGGTDFRPVFQLAD THEPDVLIYLTDGYGDFPEKAPGMPTLWVVPPGGLEDEGFPFGDVLRLEE >Mature_369_residues TTDFQHLISGSRLRLRGKSAFFATLLLHAEFVPSREVLGAGTDGERVYVNPEVAASLPPDVLDGLLLHEVLHAALAHVER RGPREKKRWNRAADLIVNGMVAAAGLPTPPQSPRDEHLEKLSVEEVYSALERQDGQEGDESGEDLLDGPPSDAPPKGSRS GQNAARRWQQALAQARSVDAMSGGKGDDPLGAHRELARLSPARLDWRAQLWRFLARTPVDFGGFDRRFVGRGLYLEALDD ESLTALIAVDTSGSVDDQAVRALVGEVQGVLGAYPHVKAVLYYADTEAYGPFELRPGDAIPAPVGGGGTDFRPVFQLADT HEPDVLIYLTDGYGDFPEKAPGMPTLWVVPPGGLEDEGFPFGDVLRLEE
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40083; Mature: 39952
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDFQHLISGSRLRLRGKSAFFATLLLHAEFVPSREVLGAGTDGERVYVNPEVAASLPP CCCCHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCHHCCCCCH DVLDGLLLHEVLHAALAHVERRGPREKKRWNRAADLIVNGMVAAAGLPTPPQSPRDEHLE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KLSVEEVYSALERQDGQEGDESGEDLLDGPPSDAPPKGSRSGQNAARRWQQALAQARSVD HCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH AMSGGKGDDPLGAHRELARLSPARLDWRAQLWRFLARTPVDFGGFDRRFVGRGLYLEALD HHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEC DESLTALIAVDTSGSVDDQAVRALVGEVQGVLGAYPHVKAVLYYADTEAYGPFELRPGDA CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCC IPAPVGGGGTDFRPVFQLADTHEPDVLIYLTDGYGDFPEKAPGMPTLWVVPPGGLEDEGF CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC PFGDVLRLEE CCHHEEEECC >Mature Secondary Structure TTDFQHLISGSRLRLRGKSAFFATLLLHAEFVPSREVLGAGTDGERVYVNPEVAASLPP CCCHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCHHCCCCCH DVLDGLLLHEVLHAALAHVERRGPREKKRWNRAADLIVNGMVAAAGLPTPPQSPRDEHLE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KLSVEEVYSALERQDGQEGDESGEDLLDGPPSDAPPKGSRSGQNAARRWQQALAQARSVD HCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH AMSGGKGDDPLGAHRELARLSPARLDWRAQLWRFLARTPVDFGGFDRRFVGRGLYLEALD HHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEC DESLTALIAVDTSGSVDDQAVRALVGEVQGVLGAYPHVKAVLYYADTEAYGPFELRPGDA CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCC IPAPVGGGGTDFRPVFQLADTHEPDVLIYLTDGYGDFPEKAPGMPTLWVVPPGGLEDEGF CCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC PFGDVLRLEE CCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA