Click here to switch to the map view.

The map label for this gene is 94984976

Identifier: 94984976

GI number: 94984976

Start: 929297

End: 930688

Strand: Reverse

Name: 94984976

Synonym: Dgeo_0869

Alternate gene names: NA

Gene position: 930688-929297 (Counterclockwise)

Preceding gene: 94984978

Following gene: 94984974

Centisome position: 37.72

GC content: 73.71

Gene sequence:

>1392_bases
ATGACCTTTTCAGAACTCGACCCGCGCACCCTCACGGCGCTGGATGTGGAGCGGGCGCTGGAGGCGGCCGGGGCGGCGCG
GGCGACCGCCGAAACGTTGCGGGGCCTGAGCGCCCACCCCGACAGCCGCGTGCGGGCACAGGTCGCGCGGCATCCCAACA
CGCCAGTTGAGGTGCTGGGCGCCCTCTCTCCCCTGTTCGCCCGCGAGGTCCTGGACAACCCCGGCCTCCCGCTGATGCGC
CTGGCGCGGCCGAACCTGTTGAGTGCGTTCCCCTCAGAGGGCGTCATTGCCCTGCTGGCTCTGCCGGACGTGCCCAGCTG
GGTGCTGGACGGCGCAGCGCGGCACGAAGACTTCGGGGTAAGGGCGGCACTGGCCGCGCGGCCCGGGCTGAGTCTGCAAC
GGGTGGAGGCGCTCGCTCAGGACGCTGGGTGGCAGGTGCGCGAGGCGGTGGCCGGACGGCCCGACCTGCCCGAAGCCCTG
CTGCGTCAACTCGCCGCAGACGACGACTATGACGTGCGGAAGGCGGTGGCCGCCCGGCCCGATCTCCCCGGTGACGTGCT
GCGCACGCTTGTGCAGGATGCCCACGGCACTGTGCGGGCCAGCGTGGCGCGGCGGCTCGACCTGCCGCTGGACTGCATGC
TCACCCTGGCCGCCGACGGCGACGTGGATGTGCTCGCAACCCTGGCCCGGCGCGTGGACCTCCCGCGCGACGTGCGCGAG
TGGCTGGCCGGGCACGCACAGCCCCTGGTGCGGAGTGCGGCGCTGCAAGCCTGGAACGTGCCCGCCCCCTGGCTGGACCG
GGCCGAACACGACGCCGACCCCGAGGTGCGCGCGGCACTGGCCCGCCGCCCCGACACCGGCGCCGAACGGCTGGCGCGCC
TGGCGACCGACGAGGCAGAAACCGTGCGCCGGGCGCTGCTGGAACGCAACGACCTGCCCGAGGAGGCCATTCTGCTCCTT
GCCCGCGCTCCCGAGCAGGACATTCGCCTGCACGTCGCCAGTGCGGAAGGCCTCACCCCCGCCGTGCTGGACGCTCTGCT
GGCCGACCCCGACCCCGCCGTCCGCACCATCCTCGCGGTGCGACCTGATCTCGGTCAGGAACGGCTGGAACGCCTCGCCG
CTGACCCCAATGCGGAAGTGCGCCGGGCGGTCGCCTATGCCACTGCCCCGGGTGAGCCTGTGTTGACCCAGCTGGCTGCC
GACCCGAACGCCGGGGTTCGTCGCGCCGCCGCCCGTCACCGCGACCTCCCCGCAGCCCTGCTCCCCGCGCTTGCCGCCGA
CCCGGACGATGGGGTGCGGCTGGCAGTCGCGGGACGTGCGGACCTCCCAGAAGCACTGCGCGAACAGTTGAGCCGGGACG
CCAACGCGAGCGTCCGCGCAGAGGCAGGCTGA

Upstream 100 bases:

>100_bases
CAGCACGGCCTCCAGTGCGAAACGGTTGCCATGAACGTCACTCAGGATCGCCACTCTCATAGACACCATCCTGCCACCGG
CGGTCTGCGATATTGACCGC

Downstream 100 bases:

>100_bases
TCCTGCCAGGCCGGAGAGGCGCCCCCTAAGGAAGCGGAACGAGGCTTCAAGCTCTCGTCAGATTGGCGAACTTCACCAGC
AGCTTTTTTGTGCCCGCCGA

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: Leucine Rich Repeat Variant Protein; Leucine Rich Repeat Protein; AbrB Family Trancriptional Regulator; Leucine Rich Repeat Variant

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MTFSELDPRTLTALDVERALEAAGAARATAETLRGLSAHPDSRVRAQVARHPNTPVEVLGALSPLFAREVLDNPGLPLMR
LARPNLLSAFPSEGVIALLALPDVPSWVLDGAARHEDFGVRAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDLPEAL
LRQLAADDDYDVRKAVAARPDLPGDVLRTLVQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVRE
WLAGHAQPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAETVRRALLERNDLPEEAILLL
ARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAVRPDLGQERLERLAADPNAEVRRAVAYATAPGEPVLTQLAA
DPNAGVRRAAARHRDLPAALLPALAADPDDGVRLAVAGRADLPEALREQLSRDANASVRAEAG

Sequences:

>Translated_463_residues
MTFSELDPRTLTALDVERALEAAGAARATAETLRGLSAHPDSRVRAQVARHPNTPVEVLGALSPLFAREVLDNPGLPLMR
LARPNLLSAFPSEGVIALLALPDVPSWVLDGAARHEDFGVRAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDLPEAL
LRQLAADDDYDVRKAVAARPDLPGDVLRTLVQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVRE
WLAGHAQPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAETVRRALLERNDLPEEAILLL
ARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAVRPDLGQERLERLAADPNAEVRRAVAYATAPGEPVLTQLAA
DPNAGVRRAAARHRDLPAALLPALAADPDDGVRLAVAGRADLPEALREQLSRDANASVRAEAG
>Mature_462_residues
TFSELDPRTLTALDVERALEAAGAARATAETLRGLSAHPDSRVRAQVARHPNTPVEVLGALSPLFAREVLDNPGLPLMRL
ARPNLLSAFPSEGVIALLALPDVPSWVLDGAARHEDFGVRAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDLPEALL
RQLAADDDYDVRKAVAARPDLPGDVLRTLVQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVREW
LAGHAQPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAETVRRALLERNDLPEEAILLLA
RAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAVRPDLGQERLERLAADPNAEVRRAVAYATAPGEPVLTQLAAD
PNAGVRRAAARHRDLPAALLPALAADPDDGVRLAVAGRADLPEALREQLSRDANASVRAEAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49500; Mature: 49368

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSELDPRTLTALDVERALEAAGAARATAETLRGLSAHPDSRVRAQVARHPNTPVEVLG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH
ALSPLFAREVLDNPGLPLMRLARPNLLSAFPSEGVIALLALPDVPSWVLDGAARHEDFGV
HHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCEEEEECCCCCHHHHCCCHHCCCCCH
RAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDLPEALLRQLAADDDYDVRKAVAARP
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC
DLPGDVLRTLVQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVRE
CCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHCCCCHHHHH
WLAGHAQPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAE
HHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHH
TVRRALLERNDLPEEAILLLARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHH
RPDLGQERLERLAADPNAEVRRAVAYATAPGEPVLTQLAADPNAGVRRAAARHRDLPAAL
CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHH
LPALAADPDDGVRLAVAGRADLPEALREQLSRDANASVRAEAG
HHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure 
TFSELDPRTLTALDVERALEAAGAARATAETLRGLSAHPDSRVRAQVARHPNTPVEVLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH
ALSPLFAREVLDNPGLPLMRLARPNLLSAFPSEGVIALLALPDVPSWVLDGAARHEDFGV
HHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCEEEEECCCCCHHHHCCCHHCCCCCH
RAALAARPGLSLQRVEALAQDAGWQVREAVAGRPDLPEALLRQLAADDDYDVRKAVAARP
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC
DLPGDVLRTLVQDAHGTVRASVARRLDLPLDCMLTLAADGDVDVLATLARRVDLPRDVRE
CCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHCCCCHHHHH
WLAGHAQPLVRSAALQAWNVPAPWLDRAEHDADPEVRAALARRPDTGAERLARLATDEAE
HHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHH
TVRRALLERNDLPEEAILLLARAPEQDIRLHVASAEGLTPAVLDALLADPDPAVRTILAV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHH
RPDLGQERLERLAADPNAEVRRAVAYATAPGEPVLTQLAADPNAGVRRAAARHRDLPAAL
CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHH
LPALAADPDDGVRLAVAGRADLPEALREQLSRDANASVRAEAG
HHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA