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The map label for this gene is ygdQ [H]

Identifier: 94984894

GI number: 94984894

Start: 844406

End: 845176

Strand: Reverse

Name: ygdQ [H]

Synonym: Dgeo_0787

Alternate gene names: 94984894

Gene position: 845176-844406 (Counterclockwise)

Preceding gene: 94984895

Following gene: 94984890

Centisome position: 34.26

GC content: 60.83

Gene sequence:

>771_bases
GTGATAGAATCCCTTTTTGGCTGGGTCAGTCAACCTGAGGCGTGGCTGGCCTTTGGAACCTTACTTCTGCTTGAAGTGGT
GCTTGGCATCGACAACGTCATCTTCCTGAGCATCCTGGCAGGCAAACTACCCCGCGAGCAGCAGCAGCGGGCGCGCACGG
TCGGCCTGCTGGCAGCCATGCTGATGCGGCTGGCGCTGTTGTTTTCGATCACCTGGATCTACCGGCTGCAGGATGATCTG
TTCCGCGTCTTCGGCCTGGGCTTTTCGGGACGCGACCTGATTCTGCTCGGCGGTGGTCTCTTCCTGCTGTACAAGGCCGT
CAAGGAGATGCACGAGCAGCTGGAAGGTCCTGGTGCCCACGAAACCAACGTGGTGAAACAGGGAACCGCCAACTTTGCGG
CGACCATTGCCCAGATCATGCTGCTCGACATCGTCTTTAGTCTGGACTCGGTGATCACGGCGGTGGGCCTGGCCGACGAC
CTCGGCGTCATGGTGTGCGCGGTGGTTGTGACGGTGGGCATCATGCTGTTTGCCGCGCGGCCTATCGGCGACTTTGTGCA
GGCCCATCCCACCGTCAAGATGCTGGCACTGGCCTTTCTGCTCCTGATCGGGATGAACCTGATCGCAGACGGCTTTGACT
TCCACATTCCCAAGGGCTACACCTACTTCGCCATGGGCTTTGCCATCATGGTCGAGCTGCTGAACATGCGCGTCCGCCGT
GGCAAGCCGGTGGACCTGCACGAGACGCAGCGGCACCCCGACGCAGGCTGA

Upstream 100 bases:

>100_bases
CCCCCGGATCTTTTGCCGCAGTCAGCGGTTCGTGTTGGTTTCGTGTTGGTGTGGGAGACCTGGTCTGTGTCCCACTCTTT
TCTCTTGACCTGGAGTTTCC

Downstream 100 bases:

>100_bases
ACAGCGCCACTGCAAAGGAGGCTGTGACAAAAGATCGCCTCGGTGTCAGCCGGTTTCCGACCTCGTCGGTGTGACACCCA
TTCTGTCTTCAGCACCAGGG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MIESLFGWVSQPEAWLAFGTLLLLEVVLGIDNVIFLSILAGKLPREQQQRARTVGLLAAMLMRLALLFSITWIYRLQDDL
FRVFGLGFSGRDLILLGGGLFLLYKAVKEMHEQLEGPGAHETNVVKQGTANFAATIAQIMLLDIVFSLDSVITAVGLADD
LGVMVCAVVVTVGIMLFAARPIGDFVQAHPTVKMLALAFLLLIGMNLIADGFDFHIPKGYTYFAMGFAIMVELLNMRVRR
GKPVDLHETQRHPDAG

Sequences:

>Translated_256_residues
MIESLFGWVSQPEAWLAFGTLLLLEVVLGIDNVIFLSILAGKLPREQQQRARTVGLLAAMLMRLALLFSITWIYRLQDDL
FRVFGLGFSGRDLILLGGGLFLLYKAVKEMHEQLEGPGAHETNVVKQGTANFAATIAQIMLLDIVFSLDSVITAVGLADD
LGVMVCAVVVTVGIMLFAARPIGDFVQAHPTVKMLALAFLLLIGMNLIADGFDFHIPKGYTYFAMGFAIMVELLNMRVRR
GKPVDLHETQRHPDAG
>Mature_256_residues
MIESLFGWVSQPEAWLAFGTLLLLEVVLGIDNVIFLSILAGKLPREQQQRARTVGLLAAMLMRLALLFSITWIYRLQDDL
FRVFGLGFSGRDLILLGGGLFLLYKAVKEMHEQLEGPGAHETNVVKQGTANFAATIAQIMLLDIVFSLDSVITAVGLADD
LGVMVCAVVVTVGIMLFAARPIGDFVQAHPTVKMLALAFLLLIGMNLIADGFDFHIPKGYTYFAMGFAIMVELLNMRVRR
GKPVDLHETQRHPDAG

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=240, Percent_Identity=58.75, Blast_Score=264, Evalue=4e-72,
Organism=Escherichia coli, GI1788119, Length=231, Percent_Identity=51.5151515151515, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI87082033, Length=228, Percent_Identity=51.7543859649123, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 28131; Mature: 28131

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESLFGWVSQPEAWLAFGTLLLLEVVLGIDNVIFLSILAGKLPREQQQRARTVGLLAAM
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LMRLALLFSITWIYRLQDDLFRVFGLGFSGRDLILLGGGLFLLYKAVKEMHEQLEGPGAH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
ETNVVKQGTANFAATIAQIMLLDIVFSLDSVITAVGLADDLGVMVCAVVVTVGIMLFAAR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIGDFVQAHPTVKMLALAFLLLIGMNLIADGFDFHIPKGYTYFAMGFAIMVELLNMRVRR
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GKPVDLHETQRHPDAG
CCCCCHHHHCCCCCCC
>Mature Secondary Structure
MIESLFGWVSQPEAWLAFGTLLLLEVVLGIDNVIFLSILAGKLPREQQQRARTVGLLAAM
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LMRLALLFSITWIYRLQDDLFRVFGLGFSGRDLILLGGGLFLLYKAVKEMHEQLEGPGAH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
ETNVVKQGTANFAATIAQIMLLDIVFSLDSVITAVGLADDLGVMVCAVVVTVGIMLFAAR
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIGDFVQAHPTVKMLALAFLLLIGMNLIADGFDFHIPKGYTYFAMGFAIMVELLNMRVRR
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GKPVDLHETQRHPDAG
CCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]