| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is ppc [H]
Identifier: 94984768
GI number: 94984768
Start: 717742
End: 720237
Strand: Reverse
Name: ppc [H]
Synonym: Dgeo_0661
Alternate gene names: 94984768
Gene position: 720237-717742 (Counterclockwise)
Preceding gene: 94984769
Following gene: 94984767
Centisome position: 29.19
GC content: 68.67
Gene sequence:
>2496_bases GTGGGGCTGAGCCATGACGTGAATGTGCTGGGGCGCACGCTGGGGCAGGTGCTCAAGGAACAGGAGGGTGAAGGCTTTTT CGAGCTGGTTGAGCGTACGCGGGCGCTCGTGCGCGACGTGCGTGCTGGGGGCGACGACACCGAACTGCGCGGCCTGATCG AGCGTCTGGATCAACGCACCGCCGAGAATCTGGTGCGGGCCTTTAGCTGGTACTTCCAGCTGGTGAATCTGGCCGAAGAG TACGAGCGGGTCCGGGTGCTGTCAGGCATCCAGGGCGTGCGCCCGCAGAGCATCGCACAGGCCCTGACGGAGCTGAAAGC GCAGGGCGTGACCGCCGAGGAGGCCGAGGCGCTGCTCCAGCGGCTGGATCTGGGCCTCACCTTCACCGCACACCCAACCG AGATGCGCCGCCGCACGGTCCGCAACCATCTGGTGGAGGTTGCGCGAGACATCCCCCATCTGGACGGTGAGGGGCTGGAA CGGGTGGCCGCCCATATCGAGGCGATGTGGGGCACGCCCGAGCTGCGCCGCCTCAAGCCCACCGTGCTCGACGAGGTCAA GGGCGGACTGAACTACGTGAGCTCTATCGCGCAGGCGCTGCCTGAGCTGCAGCGCGACCTGGTGCGGGCCTTCCATCAGG TGTACGGGCGCGCGACGCAGGCACCGCTTCCCCTCAGTTTCAGTTCGTGGATGGGTGGGGACCGCGACGGCAACCCCTTC GTCACGCCGCAAGCCACCCGCGACACGCTGGCCCTGCACCGCGAGCGGGCGCGCGAGCTGCTTCTCGGAGTGCTGCGGCA GGCGTACACGGACCTCAGTCAGGAAGACCTGGAGGAGCCGGAGCAGGCGCCCTACCGTGCCGAACTGCGCGAGCTGCATC AGGCCGTTCGAGAGGGTGAACCGGTCGACCTTGTGCCCCGGCTGGAAGCGCTGCGGGCGAGGCTCTACGCAGACGGCCAG CACCGCAGCGCTGACCTGCTGCTCACGCCACTGCTGACGGTCGCGCGGGTGTTCGGGCAGCACCTCGTCAGCCTGGATCT CCGCGAACACAGCGCGCAAACGGGCGCGGCGGTCGCGCGGCTGCTGGCAGAGGCCGGCGTGGAGACGGACTACCTGAACC TCCCCGAACATGCCAAACAGGAGGTGCTCACCCGTGAACTCCGCTCGCGCCGCCCGCTGTGGCCCGCTGGAGAGGCGCTG CCCGCGGAGCTGGAAAACGCCATCGGTCCCATCCGCGAGGTCCAGGCGGCCACCCGCGTGAGTGGGCCGCGCGCCTTTGG GCGCTACATCATCAGCATGAGCGAGAGCGTTTCGGATGTGCTGGAGCCGCTGCTGCTGGCGCGCGAGGTGGGCTTTCGCA TCCTGCCGGTGCCGCTGTTCGAGACGCTCGCCGACCTCGACCGCGCGCCACAGGTCGTATGGGAGCTGCTCAGCGTACCC GAGTACCGCGCCGTGTTGGGAGATGACGTGCAGGAGATCATGCTGGGGTACAGCGACTCCAACAAGGACGCGGGCTTTCT GGCCGCCAACTGGGCACTGCACGAAGCCCAACGCAAGATCAGCGAGGTGTGCCGCCGAGCCGGCGTTCGGTGGCGGTTTT TCCATGGCCGCGGTACCTCGATCGGGCGGGGAGGCGGCCCGGCGGCCCGGGCCATCCTAGGTCAGCCTGCCGGAACGATT GACGCGGGCCTGCGCATCACCGAACAGGGCGAGGCGCTGGCCGACAAGTACAGCCACCCGGTCCTGGCGCGGCGCAACCT CGAACAGGCCCTCTACGGCCTGCTGCTCGCCGCCGCCCGCCCCGCCGAAAACCCGCCCGCCGAATGGACGCAGGCGCTGA CGCGGGCAGCCGAGGCGAGCGCCGCCGCCTACCGCGCGTTGGTCCATGACCCCGACTTCCTGCCGTTCTTTGAGGCGGTC ACGCCCATCCACGAGATCGCCCGGCTCAACATCGCCTCACGACCCGTGCGCCGTCCGGGGGCGCCCAGTCTGGGCAATCT GCGCGCGATTCCCTGGGTGATGAGCTGGACACAAAATCGCGCCAACCTTCCCGGCTGGTATGGCCTTGCGGAGGGCCTGC GCGAAATCGGCCCCGATCTCGCGCGGCAAATGTACCAGGAGTGGCCCTTTTTCCGCACGGTGCTGGACAACGCGCAGATG AGCCTCGCCAAGAGTGACTTTCTGATCTTCGCGGAGTACCTGCGCCTCTCGGGCGAGCAACGGCTGGCCGAGCAGCTCCG GGCCGCCTACGACGAGACGGTGCGGCTGGTGCAGGAAGCAGTCGGCGCGGAGCTGCTGACGAACGAGCCGAGACTGCGCG CGAGCATCAAGCTCCGCAACCCCTACATCGACCCGATCCACCGCATTCAGGTCGAACTGCTGCGCCGCGCCCGTAGCGCC GCGGGCAGCGCCGACGATTCAGGCACAGACGAGTATGAGCGGCCCCTGCTGCTCAGCCTCCAGGGCATCGCGGCGGGGGT GCGGAATACAGGCTGA
Upstream 100 bases:
>100_bases GGCGGGGGGGCCAGCAGAGCTCAACGGGGTGATTGTCCAGATAGCGGGGAACCGCGCACACCGTGTCGAGCGTTACCGTT ACGCGGAGGAGGGCTGAGAC
Downstream 100 bases:
>100_bases CGCCTCTCCGGCCTGCGGGCGGCGTGCCTCGCTCAGAGACGACGCCTCGGCCACCGCAAGTCGGCCGGCGCGGTCTTGCC CCTCCTCGGCCCGCAGGCTG
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 831; Mature: 830
Protein sequence:
>831_residues MGLSHDVNVLGRTLGQVLKEQEGEGFFELVERTRALVRDVRAGGDDTELRGLIERLDQRTAENLVRAFSWYFQLVNLAEE YERVRVLSGIQGVRPQSIAQALTELKAQGVTAEEAEALLQRLDLGLTFTAHPTEMRRRTVRNHLVEVARDIPHLDGEGLE RVAAHIEAMWGTPELRRLKPTVLDEVKGGLNYVSSIAQALPELQRDLVRAFHQVYGRATQAPLPLSFSSWMGGDRDGNPF VTPQATRDTLALHRERARELLLGVLRQAYTDLSQEDLEEPEQAPYRAELRELHQAVREGEPVDLVPRLEALRARLYADGQ HRSADLLLTPLLTVARVFGQHLVSLDLREHSAQTGAAVARLLAEAGVETDYLNLPEHAKQEVLTRELRSRRPLWPAGEAL PAELENAIGPIREVQAATRVSGPRAFGRYIISMSESVSDVLEPLLLAREVGFRILPVPLFETLADLDRAPQVVWELLSVP EYRAVLGDDVQEIMLGYSDSNKDAGFLAANWALHEAQRKISEVCRRAGVRWRFFHGRGTSIGRGGGPAARAILGQPAGTI DAGLRITEQGEALADKYSHPVLARRNLEQALYGLLLAAARPAENPPAEWTQALTRAAEASAAAYRALVHDPDFLPFFEAV TPIHEIARLNIASRPVRRPGAPSLGNLRAIPWVMSWTQNRANLPGWYGLAEGLREIGPDLARQMYQEWPFFRTVLDNAQM SLAKSDFLIFAEYLRLSGEQRLAEQLRAAYDETVRLVQEAVGAELLTNEPRLRASIKLRNPYIDPIHRIQVELLRRARSA AGSADDSGTDEYERPLLLSLQGIAAGVRNTG
Sequences:
>Translated_831_residues MGLSHDVNVLGRTLGQVLKEQEGEGFFELVERTRALVRDVRAGGDDTELRGLIERLDQRTAENLVRAFSWYFQLVNLAEE YERVRVLSGIQGVRPQSIAQALTELKAQGVTAEEAEALLQRLDLGLTFTAHPTEMRRRTVRNHLVEVARDIPHLDGEGLE RVAAHIEAMWGTPELRRLKPTVLDEVKGGLNYVSSIAQALPELQRDLVRAFHQVYGRATQAPLPLSFSSWMGGDRDGNPF VTPQATRDTLALHRERARELLLGVLRQAYTDLSQEDLEEPEQAPYRAELRELHQAVREGEPVDLVPRLEALRARLYADGQ HRSADLLLTPLLTVARVFGQHLVSLDLREHSAQTGAAVARLLAEAGVETDYLNLPEHAKQEVLTRELRSRRPLWPAGEAL PAELENAIGPIREVQAATRVSGPRAFGRYIISMSESVSDVLEPLLLAREVGFRILPVPLFETLADLDRAPQVVWELLSVP EYRAVLGDDVQEIMLGYSDSNKDAGFLAANWALHEAQRKISEVCRRAGVRWRFFHGRGTSIGRGGGPAARAILGQPAGTI DAGLRITEQGEALADKYSHPVLARRNLEQALYGLLLAAARPAENPPAEWTQALTRAAEASAAAYRALVHDPDFLPFFEAV TPIHEIARLNIASRPVRRPGAPSLGNLRAIPWVMSWTQNRANLPGWYGLAEGLREIGPDLARQMYQEWPFFRTVLDNAQM SLAKSDFLIFAEYLRLSGEQRLAEQLRAAYDETVRLVQEAVGAELLTNEPRLRASIKLRNPYIDPIHRIQVELLRRARSA AGSADDSGTDEYERPLLLSLQGIAAGVRNTG >Mature_830_residues GLSHDVNVLGRTLGQVLKEQEGEGFFELVERTRALVRDVRAGGDDTELRGLIERLDQRTAENLVRAFSWYFQLVNLAEEY ERVRVLSGIQGVRPQSIAQALTELKAQGVTAEEAEALLQRLDLGLTFTAHPTEMRRRTVRNHLVEVARDIPHLDGEGLER VAAHIEAMWGTPELRRLKPTVLDEVKGGLNYVSSIAQALPELQRDLVRAFHQVYGRATQAPLPLSFSSWMGGDRDGNPFV TPQATRDTLALHRERARELLLGVLRQAYTDLSQEDLEEPEQAPYRAELRELHQAVREGEPVDLVPRLEALRARLYADGQH RSADLLLTPLLTVARVFGQHLVSLDLREHSAQTGAAVARLLAEAGVETDYLNLPEHAKQEVLTRELRSRRPLWPAGEALP AELENAIGPIREVQAATRVSGPRAFGRYIISMSESVSDVLEPLLLAREVGFRILPVPLFETLADLDRAPQVVWELLSVPE YRAVLGDDVQEIMLGYSDSNKDAGFLAANWALHEAQRKISEVCRRAGVRWRFFHGRGTSIGRGGGPAARAILGQPAGTID AGLRITEQGEALADKYSHPVLARRNLEQALYGLLLAAARPAENPPAEWTQALTRAAEASAAAYRALVHDPDFLPFFEAVT PIHEIARLNIASRPVRRPGAPSLGNLRAIPWVMSWTQNRANLPGWYGLAEGLREIGPDLARQMYQEWPFFRTVLDNAQMS LAKSDFLIFAEYLRLSGEQRLAEQLRAAYDETVRLVQEAVGAELLTNEPRLRASIKLRNPYIDPIHRIQVELLRRARSAA GSADDSGTDEYERPLLLSLQGIAAGVRNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=892, Percent_Identity=35.5381165919283, Blast_Score=429, Evalue=1e-121,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 92478; Mature: 92347
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSHDVNVLGRTLGQVLKEQEGEGFFELVERTRALVRDVRAGGDDTELRGLIERLDQRT CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AENLVRAFSWYFQLVNLAEEYERVRVLSGIQGVRPQSIAQALTELKAQGVTAEEAEALLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH RLDLGLTFTAHPTEMRRRTVRNHLVEVARDIPHLDGEGLERVAAHIEAMWGTPELRRLKP HHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCH TVLDEVKGGLNYVSSIAQALPELQRDLVRAFHQVYGRATQAPLPLSFSSWMGGDRDGNPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC VTPQATRDTLALHRERARELLLGVLRQAYTDLSQEDLEEPEQAPYRAELRELHQAVREGE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCCCHHHHHHHHHHHHHCCC PVDLVPRLEALRARLYADGQHRSADLLLTPLLTVARVFGQHLVSLDLREHSAQTGAAVAR CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEAGVETDYLNLPEHAKQEVLTRELRSRRPLWPAGEALPAELENAIGPIREVQAATRV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC SGPRAFGRYIISMSESVSDVLEPLLLAREVGFRILPVPLFETLADLDRAPQVVWELLSVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCC EYRAVLGDDVQEIMLGYSDSNKDAGFLAANWALHEAQRKISEVCRRAGVRWRFFHGRGTS HHHHHHCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC IGRGGGPAARAILGQPAGTIDAGLRITEQGEALADKYSHPVLARRNLEQALYGLLLAAAR CCCCCCHHHHHHHCCCCCCHHHCCEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC PAENPPAEWTQALTRAAEASAAAYRALVHDPDFLPFFEAVTPIHEIARLNIASRPVRRPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC APSLGNLRAIPWVMSWTQNRANLPGWYGLAEGLREIGPDLARQMYQEWPFFRTVLDNAQM CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHH SLAKSDFLIFAEYLRLSGEQRLAEQLRAAYDETVRLVQEAVGAELLTNEPRLRASIKLRN HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECC PYIDPIHRIQVELLRRARSAAGSADDSGTDEYERPLLLSLQGIAAGVRNTG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHEEHHHHHHHHCCCC >Mature Secondary Structure GLSHDVNVLGRTLGQVLKEQEGEGFFELVERTRALVRDVRAGGDDTELRGLIERLDQRT CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AENLVRAFSWYFQLVNLAEEYERVRVLSGIQGVRPQSIAQALTELKAQGVTAEEAEALLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH RLDLGLTFTAHPTEMRRRTVRNHLVEVARDIPHLDGEGLERVAAHIEAMWGTPELRRLKP HHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCH TVLDEVKGGLNYVSSIAQALPELQRDLVRAFHQVYGRATQAPLPLSFSSWMGGDRDGNPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC VTPQATRDTLALHRERARELLLGVLRQAYTDLSQEDLEEPEQAPYRAELRELHQAVREGE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCCCHHHHHHHHHHHHHCCC PVDLVPRLEALRARLYADGQHRSADLLLTPLLTVARVFGQHLVSLDLREHSAQTGAAVAR CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEAGVETDYLNLPEHAKQEVLTRELRSRRPLWPAGEALPAELENAIGPIREVQAATRV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC SGPRAFGRYIISMSESVSDVLEPLLLAREVGFRILPVPLFETLADLDRAPQVVWELLSVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCC EYRAVLGDDVQEIMLGYSDSNKDAGFLAANWALHEAQRKISEVCRRAGVRWRFFHGRGTS HHHHHHCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC IGRGGGPAARAILGQPAGTIDAGLRITEQGEALADKYSHPVLARRNLEQALYGLLLAAAR CCCCCCHHHHHHHCCCCCCHHHCCEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC PAENPPAEWTQALTRAAEASAAAYRALVHDPDFLPFFEAVTPIHEIARLNIASRPVRRPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC APSLGNLRAIPWVMSWTQNRANLPGWYGLAEGLREIGPDLARQMYQEWPFFRTVLDNAQM CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHH SLAKSDFLIFAEYLRLSGEQRLAEQLRAAYDETVRLVQEAVGAELLTNEPRLRASIKLRN HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECC PYIDPIHRIQVELLRRARSAAGSADDSGTDEYERPLLLSLQGIAAGVRNTG CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8543565 [H]