| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94984738
Identifier: 94984738
GI number: 94984738
Start: 680373
End: 681560
Strand: Reverse
Name: 94984738
Synonym: Dgeo_0631
Alternate gene names: NA
Gene position: 681560-680373 (Counterclockwise)
Preceding gene: 94984739
Following gene: 94984737
Centisome position: 27.62
GC content: 70.54
Gene sequence:
>1188_bases ATGAGCCGCCCTCAAGGCCAAACTCGCCGCTGGCCCGACCTCTTGATTGGCCTGCTGGTGCTGCTGCTGCTCGCGGGCTT CGTGACCCTGCTGCTGGGCCAGCGCTCCCCCGCTCCAACTCCAACGGCCACGCAGGCCCCTGCTCCAGAGGCCACCTCAG CGGCCACTCCGCCCGCGCCCGTCGTCATCCCCAGCGCCCCGGGCACCGATCTCGGACAGACAGAGACCCCTGCCCCGACT GCCGCTCCCCAGAACCCGGCCGCGACCTCCTCAGCCGCAACATCCGCCCAGACGGCTGAACCGGCCTCCAGCCAGCCTGC GGCGAGCCAGCCAGAAACAGCCGCCACGCCGCAGGCGACCGCCACGACTCCGTCCGCCACCAGCACGCCCTCGGCAAGTA CCACCATCCCCGTCGTGCCTGCCGAGCCGATCCCAGCACCGGTCACGTCCCCAGCTGCCCAGGCCCCGGTGCCTACACCC TCCACCTCTTCGGCGCAGACCACCCCGGCGACCACCCCGGCGCCGTCCACAGCCAGCGCCAGCGTGCCGCCCCGGTCTGG CGGCGCCGTCGCCACCAGCGAGCAGCGCACGCCCCTGCGCAGCGACTACCGCATCAGCCTGGGAACGTTTGGCAGCACCG GCGAGGCACAGAGCCGTACCCAGGGCGTGAGTGAGCTGGGGTATACCGTGTACCCCATTGACCTGGGCAGCCAGGTGGTG GCCCAGGTCGGCCCCTTTGCAGATGAGGCCACCGCACGGCAGGCTCTGGCGGACATCCAGCGGGCCTACCCCGGCGCAAT CCTGTATCCGCCCCGCAACCGCAGCCTGACGGGCAGCAGCCGCGCAAACGGCACAGCGGCTGAGTCTTCTCCCTCCACGC CCACAGCACCCGCAGCGGTCCAGTCGGAGTCCACATCCACGACGTCCACTGCACCGGCAGAGACCACCACGGCCAGGACG ACGCCTGCCCCCAGCGGCCCGGTGTACCTCCAAGTCGGGGCCTTCGACCGGGTGGAAAGCGCACAGAACCTGGTTGGCCA GCTGCGCGAGCAGGGCTATACTCCCACCGTCAACGCACCCGAAGGACGCAAGGTCACCGTCTTGATCGGCCCCTTCAGCG GCAAGGCGCTCACCGATGCCGAGGCGAAGCTGGACGCGAACGGTTTTGACCACTTCCGGGTGCGGTGA
Upstream 100 bases:
>100_bases TGGGCCTCGCGCAGCGCGCCCAGGCGCGGGAAACGGAGGCCCGCCAGTCCTTTAAGACCGCTGCGAACCTGGGGAACACC CGGGCGAAAGGAGCCCTCAA
Downstream 100 bases:
>100_bases GCGGATGAACGGCATTCCAACCGCGACCATCAGCCGCCTGGTCACCTATCTCCGCATCCTCGAAGGGCTGGAGGCACAGG ACGTCAGCCGCACCAGCAGC
Product: sporulation related
Products: NA
Alternate protein names: Sporulation Related Domain-Containing Protein
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSRPQGQTRRWPDLLIGLLVLLLLAGFVTLLLGQRSPAPTPTATQAPAPEATSAATPPAPVVIPSAPGTDLGQTETPAPT AAPQNPAATSSAATSAQTAEPASSQPAASQPETAATPQATATTPSATSTPSASTTIPVVPAEPIPAPVTSPAAQAPVPTP STSSAQTTPATTPAPSTASASVPPRSGGAVATSEQRTPLRSDYRISLGTFGSTGEAQSRTQGVSELGYTVYPIDLGSQVV AQVGPFADEATARQALADIQRAYPGAILYPPRNRSLTGSSRANGTAAESSPSTPTAPAAVQSESTSTTSTAPAETTTART TPAPSGPVYLQVGAFDRVESAQNLVGQLREQGYTPTVNAPEGRKVTVLIGPFSGKALTDAEAKLDANGFDHFRVR
Sequences:
>Translated_395_residues MSRPQGQTRRWPDLLIGLLVLLLLAGFVTLLLGQRSPAPTPTATQAPAPEATSAATPPAPVVIPSAPGTDLGQTETPAPT AAPQNPAATSSAATSAQTAEPASSQPAASQPETAATPQATATTPSATSTPSASTTIPVVPAEPIPAPVTSPAAQAPVPTP STSSAQTTPATTPAPSTASASVPPRSGGAVATSEQRTPLRSDYRISLGTFGSTGEAQSRTQGVSELGYTVYPIDLGSQVV AQVGPFADEATARQALADIQRAYPGAILYPPRNRSLTGSSRANGTAAESSPSTPTAPAAVQSESTSTTSTAPAETTTART TPAPSGPVYLQVGAFDRVESAQNLVGQLREQGYTPTVNAPEGRKVTVLIGPFSGKALTDAEAKLDANGFDHFRVR >Mature_394_residues SRPQGQTRRWPDLLIGLLVLLLLAGFVTLLLGQRSPAPTPTATQAPAPEATSAATPPAPVVIPSAPGTDLGQTETPAPTA APQNPAATSSAATSAQTAEPASSQPAASQPETAATPQATATTPSATSTPSASTTIPVVPAEPIPAPVTSPAAQAPVPTPS TSSAQTTPATTPAPSTASASVPPRSGGAVATSEQRTPLRSDYRISLGTFGSTGEAQSRTQGVSELGYTVYPIDLGSQVVA QVGPFADEATARQALADIQRAYPGAILYPPRNRSLTGSSRANGTAAESSPSTPTAPAAVQSESTSTTSTAPAETTTARTT PAPSGPVYLQVGAFDRVESAQNLVGQLREQGYTPTVNAPEGRKVTVLIGPFSGKALTDAEAKLDANGFDHFRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39799; Mature: 39668
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPQGQTRRWPDLLIGLLVLLLLAGFVTLLLGQRSPAPTPTATQAPAPEATSAATPPAP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC VVIPSAPGTDLGQTETPAPTAAPQNPAATSSAATSAQTAEPASSQPAASQPETAATPQAT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ATTPSATSTPSASTTIPVVPAEPIPAPVTSPAAQAPVPTPSTSSAQTTPATTPAPSTASA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVPPRSGGAVATSEQRTPLRSDYRISLGTFGSTGEAQSRTQGVSELGYTVYPIDLGSQVV CCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCHHHH AQVGPFADEATARQALADIQRAYPGAILYPPRNRSLTGSSRANGTAAESSPSTPTAPAAV HHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE QSESTSTTSTAPAETTTARTTPAPSGPVYLQVGAFDRVESAQNLVGQLREQGYTPTVNAP CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC EGRKVTVLIGPFSGKALTDAEAKLDANGFDHFRVR CCCEEEEEEECCCCCEECCCHHHCCCCCCCCEEEC >Mature Secondary Structure SRPQGQTRRWPDLLIGLLVLLLLAGFVTLLLGQRSPAPTPTATQAPAPEATSAATPPAP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC VVIPSAPGTDLGQTETPAPTAAPQNPAATSSAATSAQTAEPASSQPAASQPETAATPQAT EEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ATTPSATSTPSASTTIPVVPAEPIPAPVTSPAAQAPVPTPSTSSAQTTPATTPAPSTASA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVPPRSGGAVATSEQRTPLRSDYRISLGTFGSTGEAQSRTQGVSELGYTVYPIDLGSQVV CCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCHHHH AQVGPFADEATARQALADIQRAYPGAILYPPRNRSLTGSSRANGTAAESSPSTPTAPAAV HHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE QSESTSTTSTAPAETTTARTTPAPSGPVYLQVGAFDRVESAQNLVGQLREQGYTPTVNAP CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC EGRKVTVLIGPFSGKALTDAEAKLDANGFDHFRVR CCCEEEEEEECCCCCEECCCHHHCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA