Click here to switch to the map view.

The map label for this gene is 94984739

Identifier: 94984739

GI number: 94984739

Start: 681557

End: 683182

Strand: Reverse

Name: 94984739

Synonym: Dgeo_0632

Alternate gene names: NA

Gene position: 683182-681557 (Counterclockwise)

Preceding gene: 94984740

Following gene: 94984738

Centisome position: 27.69

GC content: 70.73

Gene sequence:

>1626_bases
GTGACCCAATGTAACCTTAAGGTGCTGCTTGGCCTGCTGCTGGCCGCCGCACCTGCCGCCAGCGCGCAGACCCTCCTTGA
CACGTCTGCGGCCATAGCCGTCCAGAACACCCTGCAACAGACTGCGGCGCCCAGCATGCCCGCCGTACCGACCCCGTCCA
CCGCGCCGACCCCCGCTCCCGCGCAAGCACCCGCCAGCGGTGATCCCTCGACCGCTCCCACCCCGCCCGCCACACCCCTG
ACCCCTGCGCAGCAGGCGCAGCTCGCTCAGGCGCAAGCAGCGCTCGGAGCAGGGCAACTCACGCAGGCACGCGCGCTCTT
CGAAGAGCTGATAGCACAGAACTACGCGCAGCCCGAACCTCACTTCGGCCTGGGCCTCACCCTATTGGCGCAGGGCAAGC
TGAAGGAGGCCGCCTTCGAGTTCACGCAGCTGAGGGCGCTGGCACCGGACCGCTACGAGGCGCCCTACAACCTGGGCGTG
ATTGCCACCCGCGAGGGCCGCTTCTCGGACGCGCTGCGGCTGTACGGCGAGGCGGCGACGCTGGCGCAGGGCAAGGCGGG
AGTCGCCACCGAACGACAGGTGCTGGAGGCGCTGGCAACCGAGCAGACCCGTGCCGGAGACTTCGCGGGCCTGAGCAGTA
CCCTTGCCCGGATTGTGGCGCTCGATCCGAACGACACGGATGCTCTCTTTCGGCTGGCCCAGGCCCGTACCCTGGCGGGG
CAAGGCGCGGCGGCGCTGCCTCAGGTCTACACGGTGTTGCAGCGCCAGCCCGCACGGGTGGATGCCGCGTTGCTGCTGGC
GGACATCTATGTCAGTCAGGGCCTGCCCGACCGGGCCGTGCGCGAACTCGATGCCGCCGCCGGACGGGTGCTCAACGGCG
GCGACCGCTCGGTGCTGCTGCTGCGCAAGGCCAATATCCTGGCCGCGACCGGAGACACGCGCGGGGCTGTGCTTGCCGCG
CAGGATGCAGTCCGTGAGGACAGCCGCTTTGCCGCCGCTTTCGCCCGCCTGGGTGAACTGCTCGTTCTGCACGGGGACCG
TCCGGGCGCCCTGGCCGCCTACGCACAGGCGGTGAAGCTCGCACCGCAAAACGCCGCCTACCTCACCGCACAGGCTGCCG
TGCGCCTGGCCCTGGGACAGACCGCCCAGGCCGGCAAGGACGCCGCGCAGGCCCTCAAACTGAAGCCCGATCCGGCCACC
CTCGCCCGCGCGCAGTTCGTGCAGGGCGTGGCCGCCTACCGCCAGGGGCAGTACGCCCAGGCGCGCGCCGCGCTGCGTTC
CAGTGCAGCCACTGCGCCCAGCGCGGAGACCTCGCTGTGGCTTGGCCTGAGCGCCTACGCCCTCAAGGACTACGCCGGGG
CCGCCAGCGCCCTGAGCGAGAGCGTGCGCCTCAACCCCACGCCGACCGCCCGCCAGAACCTTGCCTCGGCGCTGCTCGCC
GCCGCCCGTTATCCGGAAGCCGAGGCCATCTTGCGCGGCCTGGTGGATGAAAACCCCAAAAACAGTGAGGCCTGGTACCT
GCTGGGCCTCGCGCAGCGCGCCCAGGCGCGGGAAACGGAGGCCCGCCAGTCCTTTAAGACCGCTGCGAACCTGGGGAACA
CCCGGGCGAAAGGAGCCCTCAAATGA

Upstream 100 bases:

>100_bases
CATGCGAGAATTACGGCGCCCAGCGCAACCGGACCCCAGTAAGGGTTCAGAAAGGCCCCAATGCTACGATTTTCACGTTC
CCCTCTCCAGGAGGCCCCCG

Downstream 100 bases:

>100_bases
GCCGCCCTCAAGGCCAAACTCGCCGCTGGCCCGACCTCTTGATTGGCCTGCTGGTGCTGCTGCTGCTCGCGGGCTTCGTG
ACCCTGCTGCTGGGCCAGCG

Product: tetratricopeptide TPR_2

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family Protein

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MTQCNLKVLLGLLLAAAPAASAQTLLDTSAAIAVQNTLQQTAAPSMPAVPTPSTAPTPAPAQAPASGDPSTAPTPPATPL
TPAQQAQLAQAQAALGAGQLTQARALFEELIAQNYAQPEPHFGLGLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYNLGV
IATREGRFSDALRLYGEAATLAQGKAGVATERQVLEALATEQTRAGDFAGLSSTLARIVALDPNDTDALFRLAQARTLAG
QGAAALPQVYTVLQRQPARVDAALLLADIYVSQGLPDRAVRELDAAAGRVLNGGDRSVLLLRKANILAATGDTRGAVLAA
QDAVREDSRFAAAFARLGELLVLHGDRPGALAAYAQAVKLAPQNAAYLTAQAAVRLALGQTAQAGKDAAQALKLKPDPAT
LARAQFVQGVAAYRQGQYAQARAALRSSAATAPSAETSLWLGLSAYALKDYAGAASALSESVRLNPTPTARQNLASALLA
AARYPEAEAILRGLVDENPKNSEAWYLLGLAQRAQARETEARQSFKTAANLGNTRAKGALK

Sequences:

>Translated_541_residues
MTQCNLKVLLGLLLAAAPAASAQTLLDTSAAIAVQNTLQQTAAPSMPAVPTPSTAPTPAPAQAPASGDPSTAPTPPATPL
TPAQQAQLAQAQAALGAGQLTQARALFEELIAQNYAQPEPHFGLGLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYNLGV
IATREGRFSDALRLYGEAATLAQGKAGVATERQVLEALATEQTRAGDFAGLSSTLARIVALDPNDTDALFRLAQARTLAG
QGAAALPQVYTVLQRQPARVDAALLLADIYVSQGLPDRAVRELDAAAGRVLNGGDRSVLLLRKANILAATGDTRGAVLAA
QDAVREDSRFAAAFARLGELLVLHGDRPGALAAYAQAVKLAPQNAAYLTAQAAVRLALGQTAQAGKDAAQALKLKPDPAT
LARAQFVQGVAAYRQGQYAQARAALRSSAATAPSAETSLWLGLSAYALKDYAGAASALSESVRLNPTPTARQNLASALLA
AARYPEAEAILRGLVDENPKNSEAWYLLGLAQRAQARETEARQSFKTAANLGNTRAKGALK
>Mature_540_residues
TQCNLKVLLGLLLAAAPAASAQTLLDTSAAIAVQNTLQQTAAPSMPAVPTPSTAPTPAPAQAPASGDPSTAPTPPATPLT
PAQQAQLAQAQAALGAGQLTQARALFEELIAQNYAQPEPHFGLGLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYNLGVI
ATREGRFSDALRLYGEAATLAQGKAGVATERQVLEALATEQTRAGDFAGLSSTLARIVALDPNDTDALFRLAQARTLAGQ
GAAALPQVYTVLQRQPARVDAALLLADIYVSQGLPDRAVRELDAAAGRVLNGGDRSVLLLRKANILAATGDTRGAVLAAQ
DAVREDSRFAAAFARLGELLVLHGDRPGALAAYAQAVKLAPQNAAYLTAQAAVRLALGQTAQAGKDAAQALKLKPDPATL
ARAQFVQGVAAYRQGQYAQARAALRSSAATAPSAETSLWLGLSAYALKDYAGAASALSESVRLNPTPTARQNLASALLAA
ARYPEAEAILRGLVDENPKNSEAWYLLGLAQRAQARETEARQSFKTAANLGNTRAKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=315, Percent_Identity=27.3015873015873, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI32307148, Length=315, Percent_Identity=27.3015873015873, Blast_Score=72, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=323, Percent_Identity=26.625386996904, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115532692, Length=323, Percent_Identity=26.625386996904, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17647755, Length=305, Percent_Identity=28.1967213114754, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24585827, Length=305, Percent_Identity=28.1967213114754, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24585829, Length=305, Percent_Identity=28.1967213114754, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56105; Mature: 55974

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQCNLKVLLGLLLAAAPAASAQTLLDTSAAIAVQNTLQQTAAPSMPAVPTPSTAPTPAP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AQAPASGDPSTAPTPPATPLTPAQQAQLAQAQAALGAGQLTQARALFEELIAQNYAQPEP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
HFGLGLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYNLGVIATREGRFSDALRLYGEAAT
CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
LAQGKAGVATERQVLEALATEQTRAGDFAGLSSTLARIVALDPNDTDALFRLAQARTLAG
HHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCC
QGAAALPQVYTVLQRQPARVDAALLLADIYVSQGLPDRAVRELDAAAGRVLNGGDRSVLL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCCCCEEEE
LRKANILAATGDTRGAVLAAQDAVREDSRFAAAFARLGELLVLHGDRPGALAAYAQAVKL
EEECCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHC
APQNAAYLTAQAAVRLALGQTAQAGKDAAQALKLKPDPATLARAQFVQGVAAYRQGQYAQ
CCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCHHH
ARAALRSSAATAPSAETSLWLGLSAYALKDYAGAASALSESVRLNPTPTARQNLASALLA
HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AARYPEAEAILRGLVDENPKNSEAWYLLGLAQRAQARETEARQSFKTAANLGNTRAKGAL
HHCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
K
C
>Mature Secondary Structure 
TQCNLKVLLGLLLAAAPAASAQTLLDTSAAIAVQNTLQQTAAPSMPAVPTPSTAPTPAP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AQAPASGDPSTAPTPPATPLTPAQQAQLAQAQAALGAGQLTQARALFEELIAQNYAQPEP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
HFGLGLTLLAQGKLKEAAFEFTQLRALAPDRYEAPYNLGVIATREGRFSDALRLYGEAAT
CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
LAQGKAGVATERQVLEALATEQTRAGDFAGLSSTLARIVALDPNDTDALFRLAQARTLAG
HHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCC
QGAAALPQVYTVLQRQPARVDAALLLADIYVSQGLPDRAVRELDAAAGRVLNGGDRSVLL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEECCCCCEEEE
LRKANILAATGDTRGAVLAAQDAVREDSRFAAAFARLGELLVLHGDRPGALAAYAQAVKL
EEECCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHC
APQNAAYLTAQAAVRLALGQTAQAGKDAAQALKLKPDPATLARAQFVQGVAAYRQGQYAQ
CCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCHHH
ARAALRSSAATAPSAETSLWLGLSAYALKDYAGAASALSESVRLNPTPTARQNLASALLA
HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AARYPEAEAILRGLVDENPKNSEAWYLLGLAQRAQARETEARQSFKTAANLGNTRAKGAL
HHCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA