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The map label for this gene is ycjP [C]

Identifier: 94984696

GI number: 94984696

Start: 627620

End: 628471

Strand: Reverse

Name: ycjP [C]

Synonym: Dgeo_0589

Alternate gene names: 94984696

Gene position: 628471-627620 (Counterclockwise)

Preceding gene: 94984697

Following gene: 94984693

Centisome position: 25.47

GC content: 60.09

Gene sequence:

>852_bases
ATGAATGCCAAGAACCCCGCCGTCCGCACCCTGATGTTGGTTCTCTTCTGGGTGGTGGCGCTGATCGTGCTCTTCTACGT
GCTGTTTCCCTTCTACTGGGCCATCAAAACCAGCCTCACCGGCCCCGCGCAGCTCTCTGCCGAAGCGCTGGAGTGGTTTC
CCAACCACCCCACCTGGCAGAACTTCCGCGATGTATTCGCCGGTCAGCCGTTTGGGCGCAACCTGCTCAACAGCGTGATC
GTGGCGACCGGCACGGTGATCCTCAGCCTGCTGCTGTCGGCGCTGGCGGCCTACGCCCTCGGCAAATTCCGGTTTAAGGG
CAAAACAGTCCTGATGTACATCATCCTGGCCGTCAGCGTGTTTCCACAGATCGCGGTGCTGTCGGGTCTGTACACCATGA
TCAAGACCTTTGACCTGTACAACACCTGGGGTGGCCTGATCTTGTCGTACATGATCTTCACGCTGCCCTTCACGGTGTGG
ACGCTGACCGCCTTCGTGCGTGAGATTCCCACCGAGCTGGAAGAGGCCGCCTACGTGGACGGTGCCTCGCCCCTCCAGAC
GCTCTTTCAGGTGTTGCTGCCGGTGATGACGCCTGCGCTGGTCACGACCGGTCTGCTGGCCTTTATCAACGCTTGGAACG
AGTACCTCTTTGCCCTCACCTTCACCTCCGACAACACCGCCAAGACCGTGCCGGTCGCCATCGCCAACTTCAGCGGCGCG
ACCATCTACGAAAACCCCTTCGGGCAGATCATGGCCGCCAGCGTGATCGTGACGATTCCGCTGATTGTGCTTGTGCTGAT
CTTCCAGCGCAATATCGTTTCCGGTTTGACCGCAGGGGCGGTTAAGGGCTGA

Upstream 100 bases:

>100_bases
TTCGGCAGCGCCATCAGCGTCATGATCTTCCTGATCATCATGATTTTCACGGCGATCTACGTGACCAGCCTGCGGGTGAA
GTTCGACTGAGGGGAAAGCT

Downstream 100 bases:

>100_bases
CGCCAGCCAAGAAACGGGCCGCTCCAGGAAAGGGGCGGCCTTTTTGGTTCTGGGCCTTGCGGAAAAGCCACCTGAAGCGC
AACACCTAAGGCAGCACTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNAKNPAVRTLMLVLFWVVALIVLFYVLFPFYWAIKTSLTGPAQLSAEALEWFPNHPTWQNFRDVFAGQPFGRNLLNSVI
VATGTVILSLLLSALAAYALGKFRFKGKTVLMYIILAVSVFPQIAVLSGLYTMIKTFDLYNTWGGLILSYMIFTLPFTVW
TLTAFVREIPTELEEAAYVDGASPLQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNTAKTVPVAIANFSGA
TIYENPFGQIMAASVIVTIPLIVLVLIFQRNIVSGLTAGAVKG

Sequences:

>Translated_283_residues
MNAKNPAVRTLMLVLFWVVALIVLFYVLFPFYWAIKTSLTGPAQLSAEALEWFPNHPTWQNFRDVFAGQPFGRNLLNSVI
VATGTVILSLLLSALAAYALGKFRFKGKTVLMYIILAVSVFPQIAVLSGLYTMIKTFDLYNTWGGLILSYMIFTLPFTVW
TLTAFVREIPTELEEAAYVDGASPLQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNTAKTVPVAIANFSGA
TIYENPFGQIMAASVIVTIPLIVLVLIFQRNIVSGLTAGAVKG
>Mature_283_residues
MNAKNPAVRTLMLVLFWVVALIVLFYVLFPFYWAIKTSLTGPAQLSAEALEWFPNHPTWQNFRDVFAGQPFGRNLLNSVI
VATGTVILSLLLSALAAYALGKFRFKGKTVLMYIILAVSVFPQIAVLSGLYTMIKTFDLYNTWGGLILSYMIFTLPFTVW
TLTAFVREIPTELEEAAYVDGASPLQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNTAKTVPVAIANFSGA
TIYENPFGQIMAASVIVTIPLIVLVLIFQRNIVSGLTAGAVKG

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=32.1428571428571, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1790464, Length=219, Percent_Identity=36.5296803652968, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789860, Length=263, Percent_Identity=26.2357414448669, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31110; Mature: 31110

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKNPAVRTLMLVLFWVVALIVLFYVLFPFYWAIKTSLTGPAQLSAEALEWFPNHPTWQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
NFRDVFAGQPFGRNLLNSVIVATGTVILSLLLSALAAYALGKFRFKGKTVLMYIILAVSV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FPQIAVLSGLYTMIKTFDLYNTWGGLILSYMIFTLPFTVWTLTAFVREIPTELEEAAYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GASPLQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNTAKTVPVAIANFSGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHEEEECCCCC
TIYENPFGQIMAASVIVTIPLIVLVLIFQRNIVSGLTAGAVKG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNAKNPAVRTLMLVLFWVVALIVLFYVLFPFYWAIKTSLTGPAQLSAEALEWFPNHPTWQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
NFRDVFAGQPFGRNLLNSVIVATGTVILSLLLSALAAYALGKFRFKGKTVLMYIILAVSV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FPQIAVLSGLYTMIKTFDLYNTWGGLILSYMIFTLPFTVWTLTAFVREIPTELEEAAYVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GASPLQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNTAKTVPVAIANFSGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHEEEECCCCC
TIYENPFGQIMAASVIVTIPLIVLVLIFQRNIVSGLTAGAVKG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]