| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ssuA [H]
Identifier: 94984650
GI number: 94984650
Start: 573201
End: 574175
Strand: Reverse
Name: ssuA [H]
Synonym: Dgeo_0543
Alternate gene names: 94984650
Gene position: 574175-573201 (Counterclockwise)
Preceding gene: 94984653
Following gene: 94984649
Centisome position: 23.27
GC content: 63.9
Gene sequence:
>975_bases ATGAAGCGGCTCCTTCTCTCCCTCACCACCCTGGGCCTCCTCGCGAGCGCCGCAAACGCCCAGCAGGCCAAAGAGCTCCG CCTCGGCGTTTTCCCCAACGTGACGCATGCGGCCGGACTCGTCGGCATTCAGCGCGGCCTCTTCCAGAAGGAACTGGGGA ACGTAAAATTGGTCGTCAAGGAGTTTGCGAACGGTTCGCAGGTCAATGAGGCGTTCGCGGCGGGGGCAATCGACGCGGCC TATGTGGGTCCCGGTCCGGCGATGAATGCCTTCCTGCGCGGGGTGCCTATTCAGGTGTACGCGGGGGCAGCCAACGCGGG CGCGGTGCTTGTGGCGCGGGGGGAAAGCGGCATTCGCAACGTGAAGGGCCTCGCAGGAAAGAAGGTCGCGGTGCCTACGC GCGGCTCCACGCAGGACATCAGCCTGCGTCACCTGCTGCACGAAAACGGCCTGAAAGCCACCGATGAGGGCGGCAACGTC ACCATTGTCCCGATTGATCCGGCCAATATGCCCGCCGCCTTCGCGAGCAAGCAGGTGGACGCTGCGCTGGTGCAGGAACC CTGGGGCGCCGTGATGGAGTCGCAGGGCGCCCGGCTGATTGCCAATGAAAAGGCCATCTGGGCAGGCGGCAACTACACAA CCACCGTCCTGGTGGTCAATACGCGGTACGCCGCGCAGAATCCCGAGATCGTCAAGGACCTGCTGCGGGGGCACCTTGCC GCCATCAACTTCATTCAGAAGAGCAACGCGGGCGCGCAAAAGGCCATTGCGGACCAGATCGAAGCCTTCACCGGCAAGCG GCCCAACACGAATGAACTTTTCAAGGCTCTGGCCCGGACCAAGGTCACCTGGGAGATCAACCTGAAGACCCTGGCGGAGT ACGCCCAGCTCAACAAGGAGGCGGGCTTTGCACGCGACGTCCCGGACCTGGACAAGTTCGTCAACCTGAGCGTGGTGCGG GGGCTCGCGAAGTAA
Upstream 100 bases:
>100_bases GCCCCGCTCTCCGCTTGCGCCAACGGCCACAAGTGACCTCTCCGGCCTCGTTCTGGCCTAGTTTACAAAGCAACTCAACT GGTCTGCTATCTTCGCTCGC
Downstream 100 bases:
>100_bases GGCCCGCGTTCCCTGCGGCCCTGGCTCCGGCTGGGGCTTTTTTCTGGCTCACGCCTCTCCCCTCACGGCTCTTCCCCTAA CCGCTATCTTTCCCCCATGA
Product: ABC transporter, substrate-binding protein, aliphatic sulphonates
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKRLLLSLTTLGLLASAANAQQAKELRLGVFPNVTHAAGLVGIQRGLFQKELGNVKLVVKEFANGSQVNEAFAAGAIDAA YVGPGPAMNAFLRGVPIQVYAGAANAGAVLVARGESGIRNVKGLAGKKVAVPTRGSTQDISLRHLLHENGLKATDEGGNV TIVPIDPANMPAAFASKQVDAALVQEPWGAVMESQGARLIANEKAIWAGGNYTTTVLVVNTRYAAQNPEIVKDLLRGHLA AINFIQKSNAGAQKAIADQIEAFTGKRPNTNELFKALARTKVTWEINLKTLAEYAQLNKEAGFARDVPDLDKFVNLSVVR GLAK
Sequences:
>Translated_324_residues MKRLLLSLTTLGLLASAANAQQAKELRLGVFPNVTHAAGLVGIQRGLFQKELGNVKLVVKEFANGSQVNEAFAAGAIDAA YVGPGPAMNAFLRGVPIQVYAGAANAGAVLVARGESGIRNVKGLAGKKVAVPTRGSTQDISLRHLLHENGLKATDEGGNV TIVPIDPANMPAAFASKQVDAALVQEPWGAVMESQGARLIANEKAIWAGGNYTTTVLVVNTRYAAQNPEIVKDLLRGHLA AINFIQKSNAGAQKAIADQIEAFTGKRPNTNELFKALARTKVTWEINLKTLAEYAQLNKEAGFARDVPDLDKFVNLSVVR GLAK >Mature_324_residues MKRLLLSLTTLGLLASAANAQQAKELRLGVFPNVTHAAGLVGIQRGLFQKELGNVKLVVKEFANGSQVNEAFAAGAIDAA YVGPGPAMNAFLRGVPIQVYAGAANAGAVLVARGESGIRNVKGLAGKKVAVPTRGSTQDISLRHLLHENGLKATDEGGNV TIVPIDPANMPAAFASKQVDAALVQEPWGAVMESQGARLIANEKAIWAGGNYTTTVLVVNTRYAAQNPEIVKDLLRGHLA AINFIQKSNAGAQKAIADQIEAFTGKRPNTNELFKALARTKVTWEINLKTLAEYAQLNKEAGFARDVPDLDKFVNLSVVR GLAK
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34250; Mature: 34250
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLSLTTLGLLASAANAQQAKELRLGVFPNVTHAAGLVGIQRGLFQKELGNVKLVVK CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEE EFANGSQVNEAFAAGAIDAAYVGPGPAMNAFLRGVPIQVYAGAANAGAVLVARGESGIRN HHCCCCHHHHHHHHCCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCHHH VKGLAGKKVAVPTRGSTQDISLRHLLHENGLKATDEGGNVTIVPIDPANMPAAFASKQVD HHCCCCCEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHH AALVQEPWGAVMESQGARLIANEKAIWAGGNYTTTVLVVNTRYAAQNPEIVKDLLRGHLA HHHHHCHHHHHHHCCCCEEEECCCEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHH AINFIQKSNAGAQKAIADQIEAFTGKRPNTNELFKALARTKVTWEINLKTLAEYAQLNKE HHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEEEEHHHHHHHHHHHHH AGFARDVPDLDKFVNLSVVRGLAK CCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRLLLSLTTLGLLASAANAQQAKELRLGVFPNVTHAAGLVGIQRGLFQKELGNVKLVVK CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEE EFANGSQVNEAFAAGAIDAAYVGPGPAMNAFLRGVPIQVYAGAANAGAVLVARGESGIRN HHCCCCHHHHHHHHCCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCHHH VKGLAGKKVAVPTRGSTQDISLRHLLHENGLKATDEGGNVTIVPIDPANMPAAFASKQVD HHCCCCCEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHH AALVQEPWGAVMESQGARLIANEKAIWAGGNYTTTVLVVNTRYAAQNPEIVKDLLRGHLA HHHHHCHHHHHHHCCCCEEEECCCEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHH AINFIQKSNAGAQKAIADQIEAFTGKRPNTNELFKALARTKVTWEINLKTLAEYAQLNKE HHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCEEEEEEEHHHHHHHHHHHHH AGFARDVPDLDKFVNLSVVRGLAK CCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]