| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is treY [H]
Identifier: 94984646
GI number: 94984646
Start: 565216
End: 568050
Strand: Reverse
Name: treY [H]
Synonym: Dgeo_0539
Alternate gene names: 94984646
Gene position: 568050-565216 (Counterclockwise)
Preceding gene: 94984647
Following gene: 94984645
Centisome position: 23.02
GC content: 67.13
Gene sequence:
>2835_bases ATGACGGCATTCGCCTTCCATCTCCCCTCCGCGACCTATCGCCTGCAACTGCACCGTGACTTCGACTTCGCAGCAGCACG CCGAGTATTGCCGTACCTGAAGCGACTGGGCATCACGGACCTCTACCTCTCCCCGATCTGGGCGAGCACGCCGGGATCCA CCCACGGGTATGACGTGACCGACCATACCCAGGTGAACCCCGAGTTGGGCGGTGAGGCGGGGCTGCGGCGACTGGCCGCG CGGGCGGGGGAACTTGGGCTGGGGCTGATTGTGGATTTCGTGCCCAACCATATGGGCATCCAGGACGGGCACAACCCGTA CTGGGAAGACGTGCTGACGCATGGCCGGGCCAGCCGCTACGCGCACTTTTTCGACATCTCCTGGCAACCGCTCAAGCGTG CCCTGGAAAACAAGGTGCTGCTCCCGGTGCTGGGCGACCAGTACGGGCGGGTGCTGGAACGGGGCGAACTGCAACTGCGG CGGGAAGGTGGGCGCTTTTTCCTCACGTACTGGAAAAGGCGGCTGCCCCTCTCGCCGCGCAGCCTCGCACCGCTGCTCGA AGAGGTGGTGGCGTGTCTCGACCCGCACACCCCCCCAGATGAAGGAGCCGAACTCGCCAGCATCGCGCGGGCGGCGAGCA ACCTGCCCCGCTCGGTTACGGCGGATCTCAGCGACGCGGATCGCCTGGCGCGCGCCCAGGAATCGGAGGTGATCACCCGC CGTCTGGGCGCGCTGACAGAAGCTTCTCCCCCCGTCCGTGAGGCCCTGGAGCGCGTGGTGGAGGCCGTCAATGCCGATCC TGCCCGGCTGGACGCCCTGATCCAGGAGCAGAACTACCGCCTCGCGTCGTGGCGGGTGGCGGCCGAGGAGATCAACTACC GGCGTTTTTTCGATATCAACGACCTCGCCGCGCTGCGGATGGAAGACCCGCGCGTGTTTGCCTGGGCACATCGCAAGCTG TTCGAACTCGTCCGTGACGGCGTGGTGAAGGGCGTGCGTCTCGACCACACCGACGGCTTGTTCGACCCTGCTGGGTACTT CCAGGCTCTGCAACGCGGCGCAGCAGAGGCGCTGGGGCGCGAGTGGCGGGAGGATGAAGCGCTTCCCCTCTACGTGGTTG CGGAAAAGATTCTGGAACCAGGTGAGCGGTTGCCGGAGGACTGGGCCATCCACGGCACCACTGGGTACGACTTTCTGGCG CAGTTGAATGGCGTCTTTGTGGAAAGGCAGAGCGAGGAGGAGCTGACCGCCATCTATCGCCGCTTCACCGGGGACCGTGA CACCTATGGTGAGCACCTCTACCGGGGCAAGCTGTTGATTGAGCGGGTGTCTCTTCCCGGCGAGGTGAACGTGCTGGCCG AGCACCTAGAACGGATCGCAGAGGCGGATCTGCGCTCGCGCGACTTCACCCTTTCGGCGCTGCGCGAGGTGATCCGCCAG GTGATCGCGACCTTTCCGGTGTACCGCACCTACGTCCGCGAGGGCGGCTCCCGCGAGCCGGGCGACAACGCCAAGATCGA ACAGGCGATCCGCGACGCGCGCAGCCACAGCCGCCAGGGACAGCGCGAACTCGACCCTAGCCTCTTCGACTTTCTGGAGG CGGTCCTCAAGCTCGACGCCCCAGATGAGGCCACCCGCCAACGCTACGCGGGGTTCGCGCTGAAGTTTCAACAGCTCACC GGCCCGGTGACCGCGAAGGGGGCGGAGGACACGGCCTTCTACCGCTACGCCCGGCTGCTCTCGCTGAATGAGGTGGGCGG CGACCCCGCCCTCTTTGGCACGCCGCCCCGGAGCTTCCACGCGGATGCCCGGCAACGAGCAGAACGCTGGCCGGGCGCCA TGCTTGCGGGCAGCACCCACGACACCAAGCGCGGCGAGGACACCCGTGCCCGCATCAGCGTCCTCTCGGAGATGCCCCAG ACCTGGGCGGCGTACCTCAGCGCTTGGTCCCCTCTGATTCGCGCGCTGGAGCGCCCACTTGACCTGGGTCCGGCGCCCAC TTCCCTCGATACCTACATCTTCCTCCAGTCGGCGCTGGGCGCTTATCCGCTCGATGGACAGCTGGAGGGGTTCCCAGACC GCCTGAGCGCCTACATGCTCAAGGCGGCGCGCGAGGCCAAGCTCCGCACCAGCTGGGCTGCCCCCGATCAGGAGTATGAG GCGGCGCTGGACGGCCTGGTGCGCGGGTTGCTGGCCAACGAACGTTTTGCGGAGAGCCTGCGCGAACTGCATACCCGCAT CAGTCCCTACGGCGCCCAGAACGGCCTCTCGGCGGCGCTGGTGCGCCTGACCGCCCCCGGTGTTCCCGACACCTACCAAG GATCGGAAGGCTGGAACCAGAGCCTGGTGGACCCCGACAACCGCCGCCCGGTGAACTACGCCTGGCGCACCCGGACGCTG GCCCGCATCGAGAAACGCTGGCCCGAGGACAGGCAGAAACTCGCCCGCGAGCTCCTGGCCCGCTACGAGGACGGGGGCGT GAAACTGCTGGTGACCTGGGTGGCCCTGCGGGCCCGCGCCGCCTTCCCCGACCTGTTCCGGCAGGGCCACTACCACCCCA TCGAGGCTGGGAAGTACGTCCTCGCCTTTGCCCGCGAGCACGGAGACGAGGTGGCGGTAACCGTCGCGCCGCGCCTGACC TACACCCTCACCCGCGAGCGGACCCCCTGGGCGCTGGGTGAGACGTGGGGCAACCGGCAGCTCCCCCTTCCGCGACCCGG GATCTATGAAAACCTGCTTACCGGACAGCGTTTTCGTATCCGCAACGAGAAAATCCCGCTGGCCAAGGTGCTGGAGGAGT TTCCGCTGGCCCTGCTGGTTAGGCGTCCGGAATAA
Upstream 100 bases:
>100_bases ATCTCCCGTTCTCGCTCCCCGCACAGGTGCTCCTGCATTCCGAAGGCCGCGAGCATCGCAGGCTGGAGCGCGGCGAGGCG GTGCTGCTGGGGGCTGGGTC
Downstream 100 bases:
>100_bases AGGTCAGATTTCCCAACCCGCAGCTTGCAGCTTTTCCCCTGGAACCTTTTGCGCCTCTTGCTCGTATCTCCTGGCGTATG CAACTGACTGCTACCCGGAC
Product: malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 944; Mature: 943
Protein sequence:
>944_residues MTAFAFHLPSATYRLQLHRDFDFAAARRVLPYLKRLGITDLYLSPIWASTPGSTHGYDVTDHTQVNPELGGEAGLRRLAA RAGELGLGLIVDFVPNHMGIQDGHNPYWEDVLTHGRASRYAHFFDISWQPLKRALENKVLLPVLGDQYGRVLERGELQLR REGGRFFLTYWKRRLPLSPRSLAPLLEEVVACLDPHTPPDEGAELASIARAASNLPRSVTADLSDADRLARAQESEVITR RLGALTEASPPVREALERVVEAVNADPARLDALIQEQNYRLASWRVAAEEINYRRFFDINDLAALRMEDPRVFAWAHRKL FELVRDGVVKGVRLDHTDGLFDPAGYFQALQRGAAEALGREWREDEALPLYVVAEKILEPGERLPEDWAIHGTTGYDFLA QLNGVFVERQSEEELTAIYRRFTGDRDTYGEHLYRGKLLIERVSLPGEVNVLAEHLERIAEADLRSRDFTLSALREVIRQ VIATFPVYRTYVREGGSREPGDNAKIEQAIRDARSHSRQGQRELDPSLFDFLEAVLKLDAPDEATRQRYAGFALKFQQLT GPVTAKGAEDTAFYRYARLLSLNEVGGDPALFGTPPRSFHADARQRAERWPGAMLAGSTHDTKRGEDTRARISVLSEMPQ TWAAYLSAWSPLIRALERPLDLGPAPTSLDTYIFLQSALGAYPLDGQLEGFPDRLSAYMLKAAREAKLRTSWAAPDQEYE AALDGLVRGLLANERFAESLRELHTRISPYGAQNGLSAALVRLTAPGVPDTYQGSEGWNQSLVDPDNRRPVNYAWRTRTL ARIEKRWPEDRQKLARELLARYEDGGVKLLVTWVALRARAAFPDLFRQGHYHPIEAGKYVLAFAREHGDEVAVTVAPRLT YTLTRERTPWALGETWGNRQLPLPRPGIYENLLTGQRFRIRNEKIPLAKVLEEFPLALLVRRPE
Sequences:
>Translated_944_residues MTAFAFHLPSATYRLQLHRDFDFAAARRVLPYLKRLGITDLYLSPIWASTPGSTHGYDVTDHTQVNPELGGEAGLRRLAA RAGELGLGLIVDFVPNHMGIQDGHNPYWEDVLTHGRASRYAHFFDISWQPLKRALENKVLLPVLGDQYGRVLERGELQLR REGGRFFLTYWKRRLPLSPRSLAPLLEEVVACLDPHTPPDEGAELASIARAASNLPRSVTADLSDADRLARAQESEVITR RLGALTEASPPVREALERVVEAVNADPARLDALIQEQNYRLASWRVAAEEINYRRFFDINDLAALRMEDPRVFAWAHRKL FELVRDGVVKGVRLDHTDGLFDPAGYFQALQRGAAEALGREWREDEALPLYVVAEKILEPGERLPEDWAIHGTTGYDFLA QLNGVFVERQSEEELTAIYRRFTGDRDTYGEHLYRGKLLIERVSLPGEVNVLAEHLERIAEADLRSRDFTLSALREVIRQ VIATFPVYRTYVREGGSREPGDNAKIEQAIRDARSHSRQGQRELDPSLFDFLEAVLKLDAPDEATRQRYAGFALKFQQLT GPVTAKGAEDTAFYRYARLLSLNEVGGDPALFGTPPRSFHADARQRAERWPGAMLAGSTHDTKRGEDTRARISVLSEMPQ TWAAYLSAWSPLIRALERPLDLGPAPTSLDTYIFLQSALGAYPLDGQLEGFPDRLSAYMLKAAREAKLRTSWAAPDQEYE AALDGLVRGLLANERFAESLRELHTRISPYGAQNGLSAALVRLTAPGVPDTYQGSEGWNQSLVDPDNRRPVNYAWRTRTL ARIEKRWPEDRQKLARELLARYEDGGVKLLVTWVALRARAAFPDLFRQGHYHPIEAGKYVLAFAREHGDEVAVTVAPRLT YTLTRERTPWALGETWGNRQLPLPRPGIYENLLTGQRFRIRNEKIPLAKVLEEFPLALLVRRPE >Mature_943_residues TAFAFHLPSATYRLQLHRDFDFAAARRVLPYLKRLGITDLYLSPIWASTPGSTHGYDVTDHTQVNPELGGEAGLRRLAAR AGELGLGLIVDFVPNHMGIQDGHNPYWEDVLTHGRASRYAHFFDISWQPLKRALENKVLLPVLGDQYGRVLERGELQLRR EGGRFFLTYWKRRLPLSPRSLAPLLEEVVACLDPHTPPDEGAELASIARAASNLPRSVTADLSDADRLARAQESEVITRR LGALTEASPPVREALERVVEAVNADPARLDALIQEQNYRLASWRVAAEEINYRRFFDINDLAALRMEDPRVFAWAHRKLF ELVRDGVVKGVRLDHTDGLFDPAGYFQALQRGAAEALGREWREDEALPLYVVAEKILEPGERLPEDWAIHGTTGYDFLAQ LNGVFVERQSEEELTAIYRRFTGDRDTYGEHLYRGKLLIERVSLPGEVNVLAEHLERIAEADLRSRDFTLSALREVIRQV IATFPVYRTYVREGGSREPGDNAKIEQAIRDARSHSRQGQRELDPSLFDFLEAVLKLDAPDEATRQRYAGFALKFQQLTG PVTAKGAEDTAFYRYARLLSLNEVGGDPALFGTPPRSFHADARQRAERWPGAMLAGSTHDTKRGEDTRARISVLSEMPQT WAAYLSAWSPLIRALERPLDLGPAPTSLDTYIFLQSALGAYPLDGQLEGFPDRLSAYMLKAAREAKLRTSWAAPDQEYEA ALDGLVRGLLANERFAESLRELHTRISPYGAQNGLSAALVRLTAPGVPDTYQGSEGWNQSLVDPDNRRPVNYAWRTRTLA RIEKRWPEDRQKLARELLARYEDGGVKLLVTWVALRARAAFPDLFRQGHYHPIEAGKYVLAFAREHGDEVAVTVAPRLTY TLTRERTPWALGETWGNRQLPLPRPGIYENLLTGQRFRIRNEKIPLAKVLEEFPLALLVRRPE
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI1786604, Length=83, Percent_Identity=42.1686746987952, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 106639; Mature: 106508
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFAFHLPSATYRLQLHRDFDFAAARRVLPYLKRLGITDLYLSPIWASTPGSTHGYDVT CCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC DHTQVNPELGGEAGLRRLAARAGELGLGLIVDFVPNHMGIQDGHNPYWEDVLTHGRASRY CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHCC AHFFDISWQPLKRALENKVLLPVLGDQYGRVLERGELQLRREGGRFFLTYWKRRLPLSPR EEEECCCHHHHHHHHHCCEEEEHHCHHHHHHHHHCCHHEECCCCCEEEEHHHHHCCCCHH SLAPLLEEVVACLDPHTPPDEGAELASIARAASNLPRSVTADLSDADRLARAQESEVITR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RLGALTEASPPVREALERVVEAVNADPARLDALIQEQNYRLASWRVAAEEINYRRFFDIN HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHCCCCEEECCC DLAALRMEDPRVFAWAHRKLFELVRDGVVKGVRLDHTDGLFDPAGYFQALQRGAAEALGR HHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH EWREDEALPLYVVAEKILEPGERLPEDWAIHGTTGYDFLAQLNGVFVERQSEEELTAIYR HHCCCCCCCHHHHHHHHHCCHHCCCCCCEECCCCHHHHHHHHCCCEEECCCHHHHHHHHH RFTGDRDTYGEHLYRGKLLIERVSLPGEVNVLAEHLERIAEADLRSRDFTLSALREVIRQ HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VIATFPVYRTYVREGGSREPGDNAKIEQAIRDARSHSRQGQRELDPSLFDFLEAVLKLDA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCC PDEATRQRYAGFALKFQQLTGPVTAKGAEDTAFYRYARLLSLNEVGGDPALFGTPPRSFH CCHHHHHHHHHHHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ADARQRAERWPGAMLAGSTHDTKRGEDTRARISVLSEMPQTWAAYLSAWSPLIRALERPL HHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLGPAPTSLDTYIFLQSALGAYPLDGQLEGFPDRLSAYMLKAAREAKLRTSWAAPDQEYE CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AALDGLVRGLLANERFAESLRELHTRISPYGAQNGLSAALVRLTAPGVPDTYQGSEGWNQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC SLVDPDNRRPVNYAWRTRTLARIEKRWPEDRQKLARELLARYEDGGVKLLVTWVALRARA CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AFPDLFRQGHYHPIEAGKYVLAFAREHGDEVAVTVAPRLTYTLTRERTPWALGETWGNRQ CCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCC LPLPRPGIYENLLTGQRFRIRNEKIPLAKVLEEFPLALLVRRPE CCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHCCHHHEEECCC >Mature Secondary Structure TAFAFHLPSATYRLQLHRDFDFAAARRVLPYLKRLGITDLYLSPIWASTPGSTHGYDVT CEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC DHTQVNPELGGEAGLRRLAARAGELGLGLIVDFVPNHMGIQDGHNPYWEDVLTHGRASRY CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHCC AHFFDISWQPLKRALENKVLLPVLGDQYGRVLERGELQLRREGGRFFLTYWKRRLPLSPR EEEECCCHHHHHHHHHCCEEEEHHCHHHHHHHHHCCHHEECCCCCEEEEHHHHHCCCCHH SLAPLLEEVVACLDPHTPPDEGAELASIARAASNLPRSVTADLSDADRLARAQESEVITR HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RLGALTEASPPVREALERVVEAVNADPARLDALIQEQNYRLASWRVAAEEINYRRFFDIN HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHCCCCEEECCC DLAALRMEDPRVFAWAHRKLFELVRDGVVKGVRLDHTDGLFDPAGYFQALQRGAAEALGR HHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH EWREDEALPLYVVAEKILEPGERLPEDWAIHGTTGYDFLAQLNGVFVERQSEEELTAIYR HHCCCCCCCHHHHHHHHHCCHHCCCCCCEECCCCHHHHHHHHCCCEEECCCHHHHHHHHH RFTGDRDTYGEHLYRGKLLIERVSLPGEVNVLAEHLERIAEADLRSRDFTLSALREVIRQ HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VIATFPVYRTYVREGGSREPGDNAKIEQAIRDARSHSRQGQRELDPSLFDFLEAVLKLDA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCC PDEATRQRYAGFALKFQQLTGPVTAKGAEDTAFYRYARLLSLNEVGGDPALFGTPPRSFH CCHHHHHHHHHHHEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ADARQRAERWPGAMLAGSTHDTKRGEDTRARISVLSEMPQTWAAYLSAWSPLIRALERPL HHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLGPAPTSLDTYIFLQSALGAYPLDGQLEGFPDRLSAYMLKAAREAKLRTSWAAPDQEYE CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AALDGLVRGLLANERFAESLRELHTRISPYGAQNGLSAALVRLTAPGVPDTYQGSEGWNQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC SLVDPDNRRPVNYAWRTRTLARIEKRWPEDRQKLARELLARYEDGGVKLLVTWVALRARA CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AFPDLFRQGHYHPIEAGKYVLAFAREHGDEVAVTVAPRLTYTLTRERTPWALGETWGNRQ CCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCC LPLPRPGIYENLLTGQRFRIRNEKIPLAKVLEEFPLALLVRRPE CCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHCCHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]