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The map label for this gene is ybhL [C]

Identifier: 94984645

GI number: 94984645

Start: 564452

End: 565138

Strand: Reverse

Name: ybhL [C]

Synonym: Dgeo_0538

Alternate gene names: 94984645

Gene position: 565138-564452 (Counterclockwise)

Preceding gene: 94984646

Following gene: 94984643

Centisome position: 22.91

GC content: 65.5

Gene sequence:

>687_bases
ATGCAACTGACTGCTACCCGGACAGAAACGCTGGTCCGTACCTTTATGGCGCGGACGTACTCCTGGATGGCGGCGGGGCT
TGCCCTGACTGCTGGGGTTGCCTACCTGACGGCTCAGAACGAGGCTCTGGCCGCGCAGGTGATGGGACTCCGGATGCCGC
TGGTGCTGGCACAGCTTGCCATCGTCTTTGTGCTGAGCCTCGCCGCGCAGCGCCTGAGCAGCGCCGTGGCGGGCATCCTC
TTTATCGCCTATGCCGCCCTGACTGGCCTGACCTTCAGCAGCCTGCTGCTGGCCTACAGCCCCAGCGCGGTGACGGCAGC
CTTCCTGACGACCGCAGGCACCTTCGCCGCGATGAGCGTGGCCGGCTTGGTGATCAAGCGTGACCTCAGTGCGCTGGGGC
GCTTCTTCCTGTTCGCGGTCCTGGGCCTGCTCATCGCCATGATCGTGAATCTGTTCGTGGCAAGCAGCGCCCTGACCCTC
GGCATCAGCATCGTCGGCGTGCTGCTCTTTGCGGGCCTGACCGCCTACGACACCCAGATGCTCCGCACCCTGGCGCTGAG
CGGCGTCAGCGGCGAGCTGGCCGAGCGGGCCGCGATCAACGGCGCCCTGGCCCTGTACCTGGACTTCATCAACATGTTCC
TGTTCATCCTGCGGCTCTTCGGCTTTGCGGGAAGCAGCGACGATTGA

Upstream 100 bases:

>100_bases
TGCTGGTTAGGCGTCCGGAATAAAGGTCAGATTTCCCAACCCGCAGCTTGCAGCTTTTCCCCTGGAACCTTTTGCGCCTC
TTGCTCGTATCTCCTGGCGT

Downstream 100 bases:

>100_bases
GGAAAGCCGGCTGCGCCCAGCGTCCAGCATAAAAACCAGCATCAAAAACTGCCCCGGCTTTTGCTGGGGCAGCTTTGTTC
TCTTTGCTGGTTTGTTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQLTATRTETLVRTFMARTYSWMAAGLALTAGVAYLTAQNEALAAQVMGLRMPLVLAQLAIVFVLSLAAQRLSSAVAGIL
FIAYAALTGLTFSSLLLAYSPSAVTAAFLTTAGTFAAMSVAGLVIKRDLSALGRFFLFAVLGLLIAMIVNLFVASSALTL
GISIVGVLLFAGLTAYDTQMLRTLALSGVSGELAERAAINGALALYLDFINMFLFILRLFGFAGSSDD

Sequences:

>Translated_228_residues
MQLTATRTETLVRTFMARTYSWMAAGLALTAGVAYLTAQNEALAAQVMGLRMPLVLAQLAIVFVLSLAAQRLSSAVAGIL
FIAYAALTGLTFSSLLLAYSPSAVTAAFLTTAGTFAAMSVAGLVIKRDLSALGRFFLFAVLGLLIAMIVNLFVASSALTL
GISIVGVLLFAGLTAYDTQMLRTLALSGVSGELAERAAINGALALYLDFINMFLFILRLFGFAGSSDD
>Mature_228_residues
MQLTATRTETLVRTFMARTYSWMAAGLALTAGVAYLTAQNEALAAQVMGLRMPLVLAQLAIVFVLSLAAQRLSSAVAGIL
FIAYAALTGLTFSSLLLAYSPSAVTAAFLTTAGTFAAMSVAGLVIKRDLSALGRFFLFAVLGLLIAMIVNLFVASSALTL
GISIVGVLLFAGLTAYDTQMLRTLALSGVSGELAERAAINGALALYLDFINMFLFILRLFGFAGSSDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=226, Percent_Identity=42.0353982300885, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23873; Mature: 23873

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTATRTETLVRTFMARTYSWMAAGLALTAGVAYLTAQNEALAAQVMGLRMPLVLAQLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IVFVLSLAAQRLSSAVAGILFIAYAALTGLTFSSLLLAYSPSAVTAAFLTTAGTFAAMSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AGLVIKRDLSALGRFFLFAVLGLLIAMIVNLFVASSALTLGISIVGVLLFAGLTAYDTQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTLALSGVSGELAERAAINGALALYLDFINMFLFILRLFGFAGSSDD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQLTATRTETLVRTFMARTYSWMAAGLALTAGVAYLTAQNEALAAQVMGLRMPLVLAQLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IVFVLSLAAQRLSSAVAGILFIAYAALTGLTFSSLLLAYSPSAVTAAFLTTAGTFAAMSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AGLVIKRDLSALGRFFLFAVLGLLIAMIVNLFVASSALTLGISIVGVLLFAGLTAYDTQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRTLALSGVSGELAERAAINGALALYLDFINMFLFILRLFGFAGSSDD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]