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The map label for this gene is 94984346

Identifier: 94984346

GI number: 94984346

Start: 223875

End: 224630

Strand: Reverse

Name: 94984346

Synonym: Dgeo_0238

Alternate gene names: NA

Gene position: 224630-223875 (Counterclockwise)

Preceding gene: 94984347

Following gene: 94984345

Centisome position: 9.1

GC content: 60.85

Gene sequence:

>756_bases
ATGACCCAGCACCCACCACCGGGCCGCACCTTTGTCCTTGAAGTTTGGGGCGATTACGGCTGTTTTACCCGACCCGAACT
CAAGGTCGAGCGGATGAGCTATCCCGTGATGACGCCTAGCGCTGCCCGCAATATTTTTGATGCCATTTATCTTGAGTTTG
ACCCCCAGACCCGCAGGCCCGCTCACCGCTGGGAAATCAGCCGCATCGAGATTCTGGAACCGGTGCGCTATGTCGCCCTG
ATGCGCAATGAGGTCAAGGAAAAAATCAGCGAACCCAGCGTCAAGAAATGGATGAAAGACCCCGCGCAGCTTGTTCCCAT
TCTGGCCGACGCCACGAAGGACGAGGTAGGCACCGATACCAAAGGCCGGACCCAGCGCCAGACCATGGCCCTGAAGTCCC
CCCATTACCGCATCTCCGGGCACGCTGTGCTGTTTGAGGAGGATGGAGCGCTGCGGCAGAAAATCGAGCGCAGCTTTGAG
CGCCGAGCACGCCGGGGCCAGTGTATTTTTCAGCCCTACCTCGGGTGCCGGGAGTTTGCGGCCGCCTTTGAACTGGTCGC
CGAACAGCCCGTCGTCCCCCCCATTCCCCACGACGAGGAGGTGGGCTGGATGCTCTACGACGTCTTTGACCTCTCGCGCC
CTGGAAGCCGCAACGACGCACCCCACATCAGCCTCTTTCAGGCAAATATTCGCGGCGGCGTGCTGGAGGTGCCGCCCTAC
CACAGCGCTGACGTGCGCAAACCTGGAGGTCACTGA

Upstream 100 bases:

>100_bases
GAAGACCTCTGGTATCGTGCGAGCTGCCCACCACGCTGCTGCGTTGGTGCAGAACGTGTCCAATCCTTACCGCGTTTTTG
TTCTGTGTTGTGGAGGCCCA

Downstream 100 bases:

>100_bases
TGCTCGCCGCCCTGATTCGCCAGGCCCAGCAGGCGGGCCTCAGCCCCGAGCCAGGCTTTGCGCCCAAAGAGCTGCACTGG
CTTGCGCAGCTGCACAGCGG

Product: CRISPR-associated Cas5d family protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Dvulg Subtype; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated Cas5d Family Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTQHPPPGRTFVLEVWGDYGCFTRPELKVERMSYPVMTPSAARNIFDAIYLEFDPQTRRPAHRWEISRIEILEPVRYVAL
MRNEVKEKISEPSVKKWMKDPAQLVPILADATKDEVGTDTKGRTQRQTMALKSPHYRISGHAVLFEEDGALRQKIERSFE
RRARRGQCIFQPYLGCREFAAAFELVAEQPVVPPIPHDEEVGWMLYDVFDLSRPGSRNDAPHISLFQANIRGGVLEVPPY
HSADVRKPGGH

Sequences:

>Translated_251_residues
MTQHPPPGRTFVLEVWGDYGCFTRPELKVERMSYPVMTPSAARNIFDAIYLEFDPQTRRPAHRWEISRIEILEPVRYVAL
MRNEVKEKISEPSVKKWMKDPAQLVPILADATKDEVGTDTKGRTQRQTMALKSPHYRISGHAVLFEEDGALRQKIERSFE
RRARRGQCIFQPYLGCREFAAAFELVAEQPVVPPIPHDEEVGWMLYDVFDLSRPGSRNDAPHISLFQANIRGGVLEVPPY
HSADVRKPGGH
>Mature_250_residues
TQHPPPGRTFVLEVWGDYGCFTRPELKVERMSYPVMTPSAARNIFDAIYLEFDPQTRRPAHRWEISRIEILEPVRYVALM
RNEVKEKISEPSVKKWMKDPAQLVPILADATKDEVGTDTKGRTQRQTMALKSPHYRISGHAVLFEEDGALRQKIERSFER
RARRGQCIFQPYLGCREFAAAFELVAEQPVVPPIPHDEEVGWMLYDVFDLSRPGSRNDAPHISLFQANIRGGVLEVPPYH
SADVRKPGGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28777; Mature: 28646

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHPPPGRTFVLEVWGDYGCFTRPELKVERMSYPVMTPSAARNIFDAIYLEFDPQTRRP
CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCC
AHRWEISRIEILEPVRYVALMRNEVKEKISEPSVKKWMKDPAQLVPILADATKDEVGTDT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHHHCCCCC
KGRTQRQTMALKSPHYRISGHAVLFEEDGALRQKIERSFERRARRGQCIFQPYLGCREFA
CCCHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
AAFELVAEQPVVPPIPHDEEVGWMLYDVFDLSRPGSRNDAPHISLFQANIRGGVLEVPPY
HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCC
HSADVRKPGGH
CCCCCCCCCCC
>Mature Secondary Structure 
TQHPPPGRTFVLEVWGDYGCFTRPELKVERMSYPVMTPSAARNIFDAIYLEFDPQTRRP
CCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHEEEEECCCCCCC
AHRWEISRIEILEPVRYVALMRNEVKEKISEPSVKKWMKDPAQLVPILADATKDEVGTDT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCHHHCCCCC
KGRTQRQTMALKSPHYRISGHAVLFEEDGALRQKIERSFERRARRGQCIFQPYLGCREFA
CCCHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
AAFELVAEQPVVPPIPHDEEVGWMLYDVFDLSRPGSRNDAPHISLFQANIRGGVLEVPPY
HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCC
HSADVRKPGGH
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA