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The map label for this gene is 94984347

Identifier: 94984347

GI number: 94984347

Start: 224788

End: 227106

Strand: Reverse

Name: 94984347

Synonym: Dgeo_0239

Alternate gene names: NA

Gene position: 227106-224788 (Counterclockwise)

Preceding gene: 94984349

Following gene: 94984346

Centisome position: 9.2

GC content: 67.23

Gene sequence:

>2319_bases
TTGCCGTTTCTCTTGGGCAGGACTCGTTTCTGGCAGAGGCCACGCGGCGTGACCACCTACTACGCCCACACCTTTCCCGG
CGACGCCACCCGGCAGCGCTGGCAGCGCCTCAAAGACCATGCGGCTCAGGTGGCCGAGCAAGCGCGGCAGTACGCCGCTC
CTTTTGGCGAAGGCGACCGGGCCGCACTTGCCGGACTTCTGCATGACCTGGGCAAATACGGCGTCCTGTTTCAACGCCGC
CTCTGCGGACTGGAACGGGGCTTGGACCACTGGTCCGCGGGCGCTTGCCTGGCCAAACAGGCTTACCGAGATGCAGGGCT
GGCGCTGGCTATCGCCGGGCATCACACCGGACTTCCCTGCGGAGATGCCGAAACGCTGCGCGACCTGACCCTCGAACGCC
TCAGCACCCAGCATCCCCTGGGGCTGCGCCTCACCGAGCCAGACCCCGACCAGACCAACCTCAAGAAACTGGTCCAGCGT
CTGCTGGAGGATGGTCTCACGTTGCCCCGGCCAGGTGTCCTGCCGCTCCGACCGGGCCAAACCGCTGCCGACATGCTGGA
CACCCGCATGCTGTTTTCGGCGCTGGTGGATGCCGACTATCTGGACACCGAGGCGGCCATGCGCGCAGATGACGAACCTC
CACGTCCCGCAGGGCTGCCGCTGGACGCTCCCCGTCTGCTTGCCGCCCTAGAAGAGCGGCTGGCAGAACTGGCCTGCGAG
GAAAGCCTGCCACCCACTACCCGCGCCCTGCGCGCAGATCTGATGCAGGCTTGCCGCGCGGCAGGTGAGGCCACAGGCCC
GCTGTGGACCCTCACAGCGCCCACAGGCAGCGGCAAAACGCTCGCCCTGCTGCTGTTTGCCCTCACGCGGGCCGTTTGCC
AGCCCCCAGCGCGGCCCATTCGCCGCATCGTGGTGGTGCTTCCCTTTCTGAGCCTGCTCGACCAGACCGCCGAGGAGTAT
CGCCGCATTGTGGCGGCTGCCGGACTTGATCCTGCCTGTCTCTTGGAACATCACAGCCTCGCGGGCACCCACGCGGCCCA
CTCAGACTCCGCCGCGCGGCAGCTCACCGAGAACTGGGACGCGCCCTTGATCCTGACCACCAGCGTTCAGCTCCTGGAAA
GCCTGCATGCCCACACCCCCGGGGCGTGCCGCAAACTGCACCGCCTGGCTCAGAGCATCATCCTGCTCGATGAAGTGCAG
ACGCTCCCGGCCCCCCTGGCCGTCCTGACCCTCAAGACCCTCGCGCGCCTCACCCAAGAAAAGTACGGAGCCACGGTCGT
GATGGCCACGGCCACCCAACCCGCCTTTGACCTGCTGAGCGAGCAGGTCCGCGAAGCTGGCAATGCCGGCTGGCAGCCCC
AGGAGATGGCACCGCCCCCACTGCGGCTGTTTGAGCGTTCCAAGCGGGTCACACCCCATTGGCACCTGGAGACGCCGACG
CCCTGGGCGACGGTCCAAGACTGGCTGCGTCAGGAACCGCACAGCCTGTGTATCGTCAACCTGCGCCAAGACGCCCTGAC
CCTCGCCCAAGCCCTCTCAGACGCCCCAGGGCTGCGCCACCTCTCAACCTTCCTGTGCCCAGCCCACCGCCGCGCCGTAC
TGGAGGAGATTCGCGCGGACCTCCAGGCAGGACGACCGGTTCGCCTGGTCTCCACCCAATGCGTTGAGGCAGGAGTTGAT
CTCGATTTTCCGGTGGTATTTCGCGCTCTGGCGCCCCTTGACGCCATCGCACAGGCGGCGGGGCGCTGTAATCGGCACGG
ACGGCGTCCGTACGGCAAGCTGCACGTCTTTCTGCCCGAGGAAGACCGCTATCCGACAAGCGCCTACCAGCGGGCCGCCC
TGCTCACCCTCAGCCTGGCTCGCGAGAACGGCGGTCACCTGAACCTCGCTGATCCCGCCACGTTTCGCCGCTTCTATGAA
CGGCTGTGGCCCTACACCACCACCAACCGGGCAGAGCTGCGTGAGGCTGTCGCGCGGCAAGACTACCCTACGGTCGCCCG
GCTCTACCGCCTGATTCCCCAGGACAGCGTGAATGTGGTGGTGCCCTATGGCGAGGGACCGGCCCTCATCGAGGAAGCGC
GGCAACAGGGCATCACCCGCGCGTGGATGCGCCGGGCGCAACCCTACACCGTCACGGTCTTTCGCCGCCCCGACGGGACG
CTGCCGCCCCACTGCGAACCCGTCAACCTGCGAACCCGGCACGGCGCACCTGCCCAATCTGCCGACACGTGGTTTGTCTG
CCCCCACCCCGAAGCCTATGACGCCCAGCTTTTGGGCTGGCAACCCGACGGCGGCGGCGCGGAACCTTTTGTGCTCTAG

Upstream 100 bases:

>100_bases
ATCCTCCCGCCCTCCGTGCCCCTACGCTGTGGTCCATGAGCACCCCAATTGCCGTCTTGATGGGCCACAGCTCAGAAAAC
CCCCATTGGCAGGGTGCAGG

Downstream 100 bases:

>100_bases
ACGTACTTAGGTCAATTGTCTAAGTGCCGACAAGGCTTTTGACTGAGGAGAAGATGAGAAGACCTCTGGTATCGTGCGAG
CTGCCCACCACGCTGCTGCG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; CRISPR-Associated Helicase Cas3 Core; DEAD/DEAH Box Helicase Domain-Containing Protein; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Helicases; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 772; Mature: 771

Protein sequence:

>772_residues
MPFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDRAALAGLLHDLGKYGVLFQRR
LCGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPCGDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQR
LLEDGLTLPRPGVLPLRPGQTAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACE
ESLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPIRRIVVVLPFLSLLDQTAEEY
RRIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWDAPLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQ
TLPAPLAVLTLKTLARLTQEKYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPT
PWATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRADLQAGRPVRLVSTQCVEAGVD
LDFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPEEDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYE
RLWPYTTTNRAELREAVARQDYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGT
LPPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL

Sequences:

>Translated_772_residues
MPFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDRAALAGLLHDLGKYGVLFQRR
LCGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPCGDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQR
LLEDGLTLPRPGVLPLRPGQTAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACE
ESLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPIRRIVVVLPFLSLLDQTAEEY
RRIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWDAPLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQ
TLPAPLAVLTLKTLARLTQEKYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPT
PWATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRADLQAGRPVRLVSTQCVEAGVD
LDFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPEEDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYE
RLWPYTTTNRAELREAVARQDYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGT
LPPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL
>Mature_771_residues
PFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDRAALAGLLHDLGKYGVLFQRRL
CGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPCGDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQRL
LEDGLTLPRPGVLPLRPGQTAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACEE
SLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPIRRIVVVLPFLSLLDQTAEEYR
RIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWDAPLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQT
LPAPLAVLTLKTLARLTQEKYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPTP
WATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRADLQAGRPVRLVSTQCVEAGVDL
DFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPEEDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYER
LWPYTTTNRAELREAVARQDYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGTL
PPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85338; Mature: 85206

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDR
CCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AALAGLLHDLGKYGVLFQRRLCGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
GDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQRLLEDGLTLPRPGVLPLRPGQ
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACE
HHHHHHHHHHHHHHHHCCHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ESLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPI
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
RRIVVVLPFLSLLDQTAEEYRRIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
APLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQTLPAPLAVLTLKTLARLTQE
CCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPT
HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCC
PWATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRAD
CHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHH
LQAGRPVRLVSTQCVEAGVDLDFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPE
HHCCCCEEHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCC
EDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYERLWPYTTTNRAELREAVARQ
CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
DYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGT
CCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCC
LPPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PFLLGRTRFWQRPRGVTTYYAHTFPGDATRQRWQRLKDHAAQVAEQARQYAAPFGEGDR
CCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AALAGLLHDLGKYGVLFQRRLCGLERGLDHWSAGACLAKQAYRDAGLALAIAGHHTGLPC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
GDAETLRDLTLERLSTQHPLGLRLTEPDPDQTNLKKLVQRLLEDGLTLPRPGVLPLRPGQ
CCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TAADMLDTRMLFSALVDADYLDTEAAMRADDEPPRPAGLPLDAPRLLAALEERLAELACE
HHHHHHHHHHHHHHHHCCHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ESLPPTTRALRADLMQACRAAGEATGPLWTLTAPTGSGKTLALLLFALTRAVCQPPARPI
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHH
RRIVVVLPFLSLLDQTAEEYRRIVAAAGLDPACLLEHHSLAGTHAAHSDSAARQLTENWD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
APLILTTSVQLLESLHAHTPGACRKLHRLAQSIILLDEVQTLPAPLAVLTLKTLARLTQE
CCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KYGATVVMATATQPAFDLLSEQVREAGNAGWQPQEMAPPPLRLFERSKRVTPHWHLETPT
HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCC
PWATVQDWLRQEPHSLCIVNLRQDALTLAQALSDAPGLRHLSTFLCPAHRRAVLEEIRAD
CHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHH
LQAGRPVRLVSTQCVEAGVDLDFPVVFRALAPLDAIAQAAGRCNRHGRRPYGKLHVFLPE
HHCCCCEEHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCC
EDRYPTSAYQRAALLTLSLARENGGHLNLADPATFRRFYERLWPYTTTNRAELREAVARQ
CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
DYPTVARLYRLIPQDSVNVVVPYGEGPALIEEARQQGITRAWMRRAQPYTVTVFRRPDGT
CCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCC
LPPHCEPVNLRTRHGAPAQSADTWFVCPHPEAYDAQLLGWQPDGGGAEPFVL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA