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The map label for this gene is 94984343

Identifier: 94984343

GI number: 94984343

Start: 220267

End: 220902

Strand: Reverse

Name: 94984343

Synonym: Dgeo_0235

Alternate gene names: NA

Gene position: 220902-220267 (Counterclockwise)

Preceding gene: 94984344

Following gene: 94984342

Centisome position: 8.95

GC content: 66.51

Gene sequence:

>636_bases
GTGTTTCCCAAGCCGGTACCGGAGCCTCTGCTCCTTTCCAGCCTGGCACAGTACGCCTACTGCCCGCGCCGCTGCGCCCT
CGTCCATGTTGAGCAGGAGTGGGCCGATAACATCTGGACCGTACGGGGCGAACAACTGCACGAGCGGGCACACGGCGGGG
GGGAAGAGGCGCGCGGGGAGGTGCGTATTCTGCGCGCCCTGCCACTCTTCTCCCACCAACACGGCCTTGCAGGCACCGCA
GATGTGGTGGAGTTGCGGCCCGTGCCCTATCCGGTGGAGTACAAATCCAGCCGTTACCCCAAGACCCACCGGCTGGGGCA
TCTGGTCGAGGAAGTGCAGCTCTGCGCCCAGGCTCTGTGTCTGGAGGAGATGTTCGGGCAACCCGTGCCGCAGGGCGCCC
TCTACCACATCGCCAGTCGCAAACGGCGCGAGGTGACCTTTACGCCAGAACTGCGCCGCGCCGTGCTGGAAGCCGCAGGC
GGCGTGCGTGAGCTGCTGCGCTGCGGCACTCTCCCCCCGCCCGCCGCCGACGACCGTTGCCACTGGTGCAGTCTCCAGGA
GGCGTGCGAACCCTTCACGCCCCGCGACTTTCCACACGGCTATGATCCCTTCAGTACCTCTCTCGAGGACATGTGA

Upstream 100 bases:

>100_bases
GTGCACCTTGACCGCCTTCCGGCGGGCGTTGAGTTGTTGGACCTGGACAGCTGGGACGAGGCTCGGTATCACGACGGCTG
GCAATCCCGGTAGCACAGGC

Downstream 100 bases:

>100_bases
GACAACTTCTCAACACCCTCTACATCCAGACCCAGGGCACCTACCTGCACCTTGACACCGACAACATCCGGGTCGAGGTG
GAGCGAACAAAGAAGGCGAT

Product: CRISPR-associated Cas4 family protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Exonuclease Cas4 Family; CRISPR-Associated Cas1/Cas4 Family Protein; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; CRISPR-Associated Protein; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFPKPVPEPLLLSSLAQYAYCPRRCALVHVEQEWADNIWTVRGEQLHERAHGGGEEARGEVRILRALPLFSHQHGLAGTA
DVVELRPVPYPVEYKSSRYPKTHRLGHLVEEVQLCAQALCLEEMFGQPVPQGALYHIASRKRREVTFTPELRRAVLEAAG
GVRELLRCGTLPPPAADDRCHWCSLQEACEPFTPRDFPHGYDPFSTSLEDM

Sequences:

>Translated_211_residues
MFPKPVPEPLLLSSLAQYAYCPRRCALVHVEQEWADNIWTVRGEQLHERAHGGGEEARGEVRILRALPLFSHQHGLAGTA
DVVELRPVPYPVEYKSSRYPKTHRLGHLVEEVQLCAQALCLEEMFGQPVPQGALYHIASRKRREVTFTPELRRAVLEAAG
GVRELLRCGTLPPPAADDRCHWCSLQEACEPFTPRDFPHGYDPFSTSLEDM
>Mature_211_residues
MFPKPVPEPLLLSSLAQYAYCPRRCALVHVEQEWADNIWTVRGEQLHERAHGGGEEARGEVRILRALPLFSHQHGLAGTA
DVVELRPVPYPVEYKSSRYPKTHRLGHLVEEVQLCAQALCLEEMFGQPVPQGALYHIASRKRREVTFTPELRRAVLEAAG
GVRELLRCGTLPPPAADDRCHWCSLQEACEPFTPRDFPHGYDPFSTSLEDM

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23830; Mature: 23830

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPKPVPEPLLLSSLAQYAYCPRRCALVHVEQEWADNIWTVRGEQLHERAHGGGEEARGE
CCCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHHCCEEECCHHHHHHHHCCCCCHHHHH
VRILRALPLFSHQHGLAGTADVVELRPVPYPVEYKSSRYPKTHRLGHLVEEVQLCAQALC
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEEMFGQPVPQGALYHIASRKRREVTFTPELRRAVLEAAGGVRELLRCGTLPPPAADDRC
HHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
HWCSLQEACEPFTPRDFPHGYDPFSTSLEDM
CEECHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFPKPVPEPLLLSSLAQYAYCPRRCALVHVEQEWADNIWTVRGEQLHERAHGGGEEARGE
CCCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHHCCEEECCHHHHHHHHCCCCCHHHHH
VRILRALPLFSHQHGLAGTADVVELRPVPYPVEYKSSRYPKTHRLGHLVEEVQLCAQALC
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEEMFGQPVPQGALYHIASRKRREVTFTPELRRAVLEAAGGVRELLRCGTLPPPAADDRC
HHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
HWCSLQEACEPFTPRDFPHGYDPFSTSLEDM
CEECHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA